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CSPI01G26440 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G26440
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L22-2
Genome locationChr1:21634803..21636477
RNA-Seq ExpressionCSPI01G26440
SyntenyCSPI01G26440
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588488.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]5.1e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

KAG6590443.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5998.39Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_004135607.1 60S ribosomal protein L22-2 [Cucumis sativus]2.3e-60100Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_022146066.1 60S ribosomal protein L22-2 [Momordica charantia]5.1e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_022961443.1 60S ribosomal protein L22-2-like [Cucurbita moschata]1.1e-5998.39Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

TrEMBL top hitse value%identityAlignment
A0A1S3BQA5 60S ribosomal protein L22-21.1e-60100Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A5A7U6J1 60S ribosomal protein L22-21.1e-60100Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1CY92 60S ribosomal protein L22-22.4e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1F0W8 60S ribosomal protein L22-22.4e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1I4P7 60S ribosomal protein L22-22.4e-6099.19Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

SwissProt top hitse value%identityAlignment
P47198 60S ribosomal protein L222.5e-3365Show/hide
Query:  AAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKD
        A G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG LG   V++ R KSKITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+A +K+
Subjt:  AAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKD

Query:  RNVYELRYFNIAENEGEEED
           YELRYF I ++E EEED
Subjt:  RNVYELRYFNIAENEGEEED

Q90YU6 60S ribosomal protein L221.9e-3363.2Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        + +    G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG LG   VS+ R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  AANKDRNVYELRYFNIAENEGEEED
        A  K+   YELRYF I ++E EEED
Subjt:  AANKDRNVYELRYFNIAENEGEEED

Q9FE58 60S ribosomal protein L22-32.7e-5689.52Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENE EEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

Q9M9W1 60S ribosomal protein L22-25.4e-5790.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

Q9SRX7 Putative 60S ribosomal protein L22-13.5e-4068.25Show/hide
Query:  MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG+SVS+TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IAANKDRNVYELRYFNIAENEGEEED
        IA+NKD+NVYE+RYF I +     E+
Subjt:  IAANKDRNVYELRYFNIAENEGEEED

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family2.5e-4168.25Show/hide
Query:  MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG+SVS+TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IAANKDRNVYELRYFNIAENEGEEED
        IA+NKD+NVYE+RYF I +     E+
Subjt:  IAANKDRNVYELRYFNIAENEGEEED

AT3G05560.1 Ribosomal L22e protein family3.9e-5890.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT3G05560.2 Ribosomal L22e protein family3.9e-5890.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT3G05560.3 Ribosomal L22e protein family3.9e-5890.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT5G27770.1 Ribosomal L22e protein family1.9e-5789.52Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENE EEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCTAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCGTTGGA
GAAGTTTCTTCTCGAGAGGATTAAAGTTGGAGGCAAGGCTGGAGCTCTTGGGGATTCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGCAACT
TCTCAAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGAGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAATGTGTACGAACTC
AGGTACTTTAACATTGCCGAAAATGAGGGAGAGGAAGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATTGGGCGGCCGTCGATATCTGAATCCTCAACTTCTCTTCACTAACTTAGTTTTCTTTAATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGG
AGTAACCTTCACAATCGACTGTTCTAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCGTTGGAGAAGTTTCTTCTCGAGAGGATTAAAGTTGGAGGCAAGGCTGGAG
CTCTTGGGGATTCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGCAACTTCTCAAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAG
AAACACAATGTGCGAGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAATGTGTACGAACTCAGGTACTTTAACATTGCCGAAAATGAGGGAGAGGAAGAGGATTA
AATTTACCAATTTAGACATTGTATTCAAGGAACAAGTGCGTCTATACGTCGCTGGAATCTCTCACTGTTTTTGTTACTAGTGTTGCCTGTGTGATGCTCTCTATTTTTAT
TTGAACTAATGCAGTTTAGCAATTTTGTTTTCTTCGACAGACCTAGATTGCTGGTATTTTTTGTGTCATATTTGAGTAAGATCAACAATTTTTCACTTTAAATTACCCAT
GCTTTTCACATGTCTCATGAAATCTAGGTGGATGAATTATATTTATTTGAC
Protein sequenceShow/hide protein sequence
MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYEL
RYFNIAENEGEEED