; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G26450 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G26450
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionER membrane protein complex subunit 6
Genome locationChr1:21646742..21651167
RNA-Seq ExpressionCSPI01G26450
SyntenyCSPI01G26450
Gene Ontology termsGO:0006996 - organelle organization (biological process)
GO:0072546 - ER membrane protein complex (cellular component)
InterPro domainsIPR008504 - ER membrane protein complex subunit 6
IPR029008 - Rab5-interacting protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597582.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]4.8e-4589.19Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKSSD  DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

XP_004135605.1 ER membrane protein complex subunit 6 [Cucumis sativus]3.4e-5199.1Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

XP_008450632.1 PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo]3.2e-4995.5Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL 
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

XP_022137968.1 ER membrane protein complex subunit 6 [Momordica charantia]4.8e-4588.29Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKS++ ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFI YFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

XP_022937062.1 ER membrane protein complex subunit 6 [Cucurbita moschata]4.8e-4589.19Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKSSD  DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

TrEMBL top hitse value%identityAlignment
A0A0A0LZ06 ER membrane protein complex subunit 62.2e-5198.25Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTYPLH
        GLMSFVLFWT P H
Subjt:  GLMSFVLFWTYPLH

A0A1S3BQB0 ER membrane protein complex subunit 61.6e-4995.5Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL 
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

A0A6J1CBS9 ER membrane protein complex subunit 62.3e-4588.29Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKS++ ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFI YFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

A0A6J1FFH8 ER membrane protein complex subunit 62.3e-4589.19Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKSSD  DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

A0A6J1I7D9 ER membrane protein complex subunit 64.0e-4588.29Show/hide
Query:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS
        MAGYSS AS+KKSSD  DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQIL DGFLS
Subjt:  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLS

Query:  GLMSFVLFWTY
        GLMSFVLFWT+
Subjt:  GLMSFVLFWTY

SwissProt top hitse value%identityAlignment
Q3ZCG8 ER membrane protein complex subunit 61.1e-1038.46Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        P  +   ++ N  ++ Y RT +S + G  AG+LG TGL GFIFY L   + S+ L  KA   ++ YF+S   +   G + GL ++VLFWT+
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Q68EU8 ER membrane protein complex subunit 68.1e-1140.48Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        ++ N  ++ Y RT +S + G  AG+LG T L GFIFYFL   + S+ L  K+G  ++ YF+S   +   G + GL ++VLFWT+
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Q6GLC5 ER membrane protein complex subunit 66.2e-1140.48Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        ++ N  ++ Y RT +S + G  AG+LG T L GFIFYFL   + S+ L  K+G  ++ YF+S   +   G + GL ++VLFWT+
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Q9BV81 ER membrane protein complex subunit 69.5e-1239.56Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        P  +   ++ N  ++ Y RT +S + G  AG+LG TGL GFIFY L   + S+ L  KAG  ++ YF+S   +   G + GL ++VLFWT+
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Q9CQW0 ER membrane protein complex subunit 69.5e-1239.56Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY
        P  +   ++ N  ++ Y RT +S + G  AG+LG TGL GFIFY L   + S+ L  KAG  ++ YF+S   +   G + GL ++VLFWT+
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY

Arabidopsis top hitse value%identityAlignment
AT5G49540.1 Rab5-interacting family protein8.2e-3569.23Show/hide
Query:  ASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVL
        +S+K+S D+  DIP F+AENLQNNLK+I  SRTFLSII GV+AG++GF GL GF+FYF+VM ITSV L AKAGFS   YF+S N++LFDGFL GLMSFVL
Subjt:  ASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVL

Query:  FWTY
        FWT+
Subjt:  FWTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTTGGCCGACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATCATATATTA
CAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAGTTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTG
CACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTATTCGATGGCTTTCTCAGTGGACTTATGTCGTTCGTGCTTTTCTGGACG
TATCCTTTACATAACTTTATGGTTTATACAAAGTATTTTTTGCCTTTTATTTCAAATACATAA
mRNA sequenceShow/hide mRNA sequence
AACATAAAGATCAAAATATATTCATATTACTCTCAATAATCTTTTTTACCATATAATAATATATATATATATAGAAATATTATTTTCTACTTCAACACTTTGGTTCTTTC
TTCAACACTCTTCTTCTTGTGATTTCTCCAGTCTACCATTTAACACACCACAAATCGCGTCCTGATTTCGTTCTTCTCCCTCTCCATCGCTGCCATTTTCCCTCGCCGGC
TCCCCTCCATCTTCCGTTTTCCGGTCTTTTAACTTCAGATCATACGGCGGTAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTTGGCCG
ACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATCATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAGTTTTGGGA
TTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATATTTTGAAAGCTGTAA
CCAGATTCTATTCGATGGCTTTCTCAGTGGACTTATGTCGTTCGTGCTTTTCTGGACGTATCCTTTACATAACTTTATGGTTTATACAAAGTATTTTTTGCCTTTTATTT
CAAATACATAAAAAAAATTCCAACATTACACTATCAGAAAACTGAAGATATTTATTTTCTTTCTTTTCTTTAAGAGGTGGTTTTCATTTACATAGCCAAAGAGTATATA
Protein sequenceShow/hide protein sequence
MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT
YPLHNFMVYTKYFLPFISNT