CuGenDBv2

Gene ID	CSPI01G26580
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Eukaryotic translation initiation factor 6
Genome location	Chr1:21715710..21719305
RNA-Seq Expression	CSPI01G26580
Synteny	CSPI01G26580
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050889.1 eukaryotic translation initiation factor 6-2 [Cucumis melo var. makuwa]

8.5e-128

95.92

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Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSC+IGVFSKLTNAYCLVAIGGSENFYS FETE+RGVIP VKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVV+QRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAH+DLDRETE+LIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

KAE8653368.1 hypothetical protein Csa_006911 [Cucumis sativus]

4.1e-130

99.59

Show/hide

Query:  IRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLS
        I LMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLS
Subjt:  IRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLS

Query:  ALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDW
        ALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDW
Subjt:  ALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDW

Query:  TAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        TAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
Subjt:  TAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

XP_004135618.1 eukaryotic translation initiation factor 6-2 [Cucumis sativus]

5.7e-132

100

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Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

XP_008450645.1 PREDICTED: eukaryotic translation initiation factor 6-2 [Cucumis melo]

2.9e-128

96.33

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSC+IGVFSKLTNAYCLVAIGGSENFYS FETE+RGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVV+QRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAH+DLDRETE+LIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

2.1e-126

95.92

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSC+IGVFSKLTNAYCLVAIGGSENFYSTFETE+ GVIPVVKASI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL H+DLDRETEELIADVLGVEVFRQTVAGNVLVGSY SFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIE+VFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M1J5 Eukaryotic translation initiation factor 6

2.8e-132

100

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

A0A1S3BPM8 Eukaryotic translation initiation factor 6

1.4e-128

96.33

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSC+IGVFSKLTNAYCLVAIGGSENFYS FETE+RGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVV+QRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAH+DLDRETE+LIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

A0A5A7UBH8 Eukaryotic translation initiation factor 6

4.1e-128

95.92

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSC+IGVFSKLTNAYCLVAIGGSENFYS FETE+RGVIP VKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVV+QRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAH+DLDRETE+LIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

A0A5D3CEP2 Eukaryotic translation initiation factor 6

1.4e-128

96.33

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSC+IGVFSKLTNAYCLVAIGGSENFYS FETE+RGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVV+QRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAH+DLDRETE+LIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

A0A6J1D392 Eukaryotic translation initiation factor 6

5.6e-125

94.29

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSC+IGVFSKLTNAYCLVAIGGSENFYS FE+E+ GVIPVVKASI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALAH+DLDRETEELIADVLGVEVFRQTVAGNVLVGSY SFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DW AFCGSDTTATELSVIE+VFKLREAQPSSIV+EMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

1.6e-100

73.66

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA+R  FEN+C++G F+KLTNAYCLVAIGGSENFYS FE E+   IPVV ASI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSY  F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+E+VFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

1.6e-100

74.07

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA+R  FEN+C+IG F+KLTN YCLVAIGGSENFYS FE E+   IPVV ASI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSY  F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+E+VFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

4.6e-100

73.25

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA+R  FEN+C++G F+KLTN YCLVAIGGSENFYS FE E+   IPVV ASI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSY  F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+E+VFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

1.2e-119

85.31

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RL FEN+C++GVFSKLTNAYCLVAIGGSENFYS FE+E+  VIP+VK SIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VALAH+DLD+ETEE+IADVLGVEVFRQT+AGN+LVGSY + +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWT+FCGSDTTATELSVI+++FKLREAQPSSIV+EMRKSLID++V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

Q9TU47 Eukaryotic translation initiation factor 6

5.4e-101

74.07

Show/hide

Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA+R  FEN+C+IG F+KLTN+YCLVAIGGSENFYS FE E+ G IPVV ASI G RIIGR+C GN++GLLVP+ TTDQELQH+RN LPD V ++R++ER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSY  F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+E+VFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

5.6e-93

66.8

Show/hide

Query:  MAIRLMFE-NSCDIGVFSKLTNAYCLV-AIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ
        MA RL ++ N+C+IGVFSKLTNAYCLV A   S NF++ +E++++GVIP+V  SIGG+  IG LC GNKNGLL+ HT TDQELQHLR+SLPD+VVVQRI+
Subjt:  MAIRLMFE-NSCDIGVFSKLTNAYCLV-AIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ

Query:  ERLSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLT
        E + ALGN IACND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSY S +N GG+VH +T+VE++ EL+ L+QVPLVAGTVNRGS+VI+AGLT
Subjt:  ERLSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLT

Query:  ANDWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
         NDWTAFCGSDTTA ELSV+ N+FKL ++QP  +  EMRKSLID++V
Subjt:  ANDWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

AT3G55620.1 Translation initiation factor IF6

8.3e-121

85.31

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Query:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RL FEN+C++GVFSKLTNAYCLVAIGGSENFYS FE+E+  VIP+VK SIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VALAH+DLD+ETEE+IADVLGVEVFRQT+AGN+LVGSY + +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWT+FCGSDTTATELSVI+++FKLREAQPSSIV+EMRKSLID++V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

Sequences

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CDS sequence

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ATGGCGATCAGGCTTATGTTTGAGAACTCATGTGACATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTAC
CTTTGAAACTGAAATACGTGGTGTCATTCCGGTTGTTAAAGCATCTATTGGTGGGACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCAC
ACACCACTACGGATCAAGAACTTCAGCACTTGAGGAACAGTTTGCCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTTTGGGAAACACGATTGCTTGT
AATGATCACGTTGCTCTCGCACATTCTGATCTTGATCGGGAAACTGAAGAGCTCATCGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCAGGCAACGTTCT
CGTGGGAAGCTACTCTAGTTTTACGAATAGGGGAGGCTTGGTTCATCCACATACATCCGTTGAAGATTTGGACGAGCTATCAACCCTTCTTCAGGTCCCGTTAGTCGCTG
GAACCGTGAATCGTGGAAGTGAAGTGATTGCGGCTGGATTAACAGCAAATGACTGGACTGCATTTTGTGGTTCGGACACCACTGCCACCGAGTTATCGGTCATCGAGAAT
GTTTTCAAATTGAGGGAGGCTCAACCAAGCTCCATTGTCGAAGAAATGAGGAAGTCGTTGATTGACAGTCATGTGTGA

mRNA sequence

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AAAAATCAGAAAGCTAAAATAGTATACTATTTGAAAATGGATGAAAAGTATAATTAATCAGCCAATTCCTGTCTTGACTTTGCTTTCTCCTCCGTGTCATCAACCTCACG
ATCTTTATCTTCGATTATCTGTCAGCAACGACGTTCCAGCTCCGATTTGGGGTTGCAAGGGACTTTGAGTTTATAGTGAAGAGGGAGGTTGTTGTTGTTGATTCTTCAAG
GTTATCTTGTGCAACTCATGGCGATCAGGCTTATGTTTGAGAACTCATGTGACATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCT
GAGAATTTCTACAGTACCTTTGAAACTGAAATACGTGGTGTCATTCCGGTTGTTAAAGCATCTATTGGTGGGACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAA
TGGGCTTCTTGTACCACACACCACTACGGATCAAGAACTTCAGCACTTGAGGAACAGTTTGCCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTTTGG
GAAACACGATTGCTTGTAATGATCACGTTGCTCTCGCACATTCTGATCTTGATCGGGAAACTGAAGAGCTCATCGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACA
GTAGCAGGCAACGTTCTCGTGGGAAGCTACTCTAGTTTTACGAATAGGGGAGGCTTGGTTCATCCACATACATCCGTTGAAGATTTGGACGAGCTATCAACCCTTCTTCA
GGTCCCGTTAGTCGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCGGCTGGATTAACAGCAAATGACTGGACTGCATTTTGTGGTTCGGACACCACTGCCACCGAGT
TATCGGTCATCGAGAATGTTTTCAAATTGAGGGAGGCTCAACCAAGCTCCATTGTCGAAGAAATGAGGAAGTCGTTGATTGACAGTCATGTGTGAGGAGTTTCTTCTTCT
ACACTTGAGATTTGCAAGCAATTAATTGTTATTACTCTTATCTTTATCTTCTTCTGCTATATTTAATGACATTGTGAGTGAAATTGCAGTTGTATATATACTTTGGTATC
ATCGTCTTGGTCTTGTATTATTGTTACCATTACCGAAAGTCGATCAGTAACGATATCTGTAATAATAACAATACTTATGATATATTTATCATTCTCTTGCTATAACAGTA
TGATAGTATTTGTAACTGTGATGGACAACAATTGGAAATTCCTTCTAACGGTATCTAGAAAAAAGCTAATAAATCTCATAATTTTCAAG

Protein sequence

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MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIAC
NDHVALAHSDLDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIEN
VFKLREAQPSSIVEEMRKSLIDSHV

CSPI01G26580 (gene) of Cucumber (PI 183967) v1 genome