CuGenDBv2

Gene ID	CSPI01G27000
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	autophagy-related protein 18h isoform X1
Genome location	Chr1:21978067..21979396
RNA-Seq Expression	CSPI01G27000
Synteny	CSPI01G27000
Gene Ontology terms	GO:0006914 - autophagy (biological process) GO:0042594 - response to starvation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR045142 - BCAS3-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK10204.1 autophagy-related protein 18h isoform X1 [Cucumis melo var. makuwa]

5.2e-99

97.49

Show/hide

Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSV DIKMEEKDGSVLPS VMKENSFQERASVSSKQSS GFSPVEGSDFTNSPSTVTSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATG SNCRDPAEAV DDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

XP_004135794.1 autophagy-related protein 18h [Cucumis sativus]

8.6e-102

99.5

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Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSV DIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

XP_008450707.1 PREDICTED: autophagy-related protein 18h isoform X1 [Cucumis melo]

5.2e-99

97.49

Show/hide

Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSV DIKMEEKDGSVLPS VMKENSFQERASVSSKQSS GFSPVEGSDFTNSPSTVTSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATG SNCRDPAEAV DDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

XP_022931759.1 autophagy-related protein 18h-like isoform X1 [Cucurbita moschata]

6.4e-89

89.95

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Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        +KYSEG   SDLKL+S GLEENSDGIS PPIAKSV DIKM+EKDGSVL SPVMKENSFQERASVSSKQSSTG SP EGS+FTNSPST TSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSK GGASEGSN SSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEA+ DD+DSSGSPHYREK EEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

XP_038878722.1 autophagy-related protein 18h [Benincasa hispida]

1.2e-95

94.47

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Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        M YSEGV ISDLKL+SPGLEE SDGISYPPIAKSV DIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTG SPVEGSDFTNSPSTVTSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        +AVQSSK GGASEGSNTSSNRSD+SMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAV DDMDSSGSPHYREK EEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LW47 Uncharacterized protein

4.2e-102

99.5

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Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSV DIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

A0A1S3BQU8 autophagy-related protein 18h isoform X1

2.5e-99

97.49

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Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSV DIKMEEKDGSVLPS VMKENSFQERASVSSKQSS GFSPVEGSDFTNSPSTVTSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATG SNCRDPAEAV DDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

A0A5D3CG74 Autophagy-related protein 18h isoform X1

2.5e-99

97.49

Show/hide

Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSV DIKMEEKDGSVLPS VMKENSFQERASVSSKQSS GFSPVEGSDFTNSPSTVTSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATG SNCRDPAEAV DDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

A0A6J1EUJ9 autophagy-related protein 18h-like isoform X2

3.1e-89

89.95

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Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        +KYSEG   SDLKL+S GLEENSDGIS PPIAKSV DIKM+EKDGSVL SPVMKENSFQERASVSSKQSSTG SP EGS+FTNSPST TSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSK GGASEGSN SSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEA+ DD+DSSGSPHYREK EEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

A0A6J1EV50 autophagy-related protein 18h-like isoform X1

3.1e-89

89.95

Show/hide

Query:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL
        +KYSEG   SDLKL+S GLEENSDGIS PPIAKSV DIKM+EKDGSVL SPVMKENSFQERASVSSKQSSTG SP EGS+FTNSPST TSCSLSTDRTIL
Subjt:  MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTIL

Query:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE
        KAVQSSK GGASEGSN SSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEA+ DD+DSSGSPHYREK EEDGDTDDMLGGVFAFSEE
Subjt:  KAVQSSKRGGASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEE

SwissProt top hits

e value

%identity

Alignment

Q8H1Q5 Autophagy-related protein 18h

1.2e-05

37.5

Show/hide

Query:  SPVEGSDFTNSPSTVTSCSLSTDRTILKAVQSSKRGGASEGSNTSSNRSDLSMNILD--EGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSS
        S V+ +D+ +  + V    L  + ++    +     G S  SN SSNRSD+SMN  D  EGP+  S ++E FF+E     T         E    D  S 
Subjt:  SPVEGSDFTNSPSTVTSCSLSTDRTILKAVQSSKRGGASEGSNTSSNRSDLSMNILD--EGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSS

Query:  GSPHYREKSEEDGDTDDMLGGVFAFSEE
        G      K ++D D DDMLGGVFAFSEE
Subjt:  GSPHYREKSEEDGDTDDMLGGVFAFSEE

Arabidopsis top hits

e value

%identity

Alignment

AT1G54710.1 homolog of yeast autophagy 18 (ATG18) H

8.6e-07

37.5

Show/hide

Query:  SPVEGSDFTNSPSTVTSCSLSTDRTILKAVQSSKRGGASEGSNTSSNRSDLSMNILD--EGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSS
        S V+ +D+ +  + V    L  + ++    +     G S  SN SSNRSD+SMN  D  EGP+  S ++E FF+E     T         E    D  S 
Subjt:  SPVEGSDFTNSPSTVTSCSLSTDRTILKAVQSSKRGGASEGSNTSSNRSDLSMNILD--EGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSS

Query:  GSPHYREKSEEDGDTDDMLGGVFAFSEE
        G      K ++D D DDMLGGVFAFSEE
Subjt:  GSPHYREKSEEDGDTDDMLGGVFAFSEE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGTATTCAGAAGGTGTTACTATTTCAGATTTAAAGTTAAACTCACCTGGCTTGGAGGAAAATTCAGATGGTATATCTTATCCACCCATAGCCAAGTCTGTGGTTGA
CATTAAGATGGAAGAGAAGGATGGATCTGTTTTGCCCTCACCAGTAATGAAAGAGAACTCTTTTCAGGAGCGGGCCTCTGTTTCCTCTAAACAATCTAGCACCGGATTTT
CCCCAGTTGAAGGCAGTGATTTTACTAACAGCCCATCAACTGTGACAAGTTGCTCACTCTCCACTGATAGAACTATTTTAAAAGCGGTTCAGTCTTCCAAACGTGGAGGA
GCCAGTGAGGGCTCAAATACAAGTTCCAACCGTTCTGACTTGAGTATGAATATTCTTGATGAGGGACCAATGGGTGACTCATTTGATTATGAACCATTCTTTCAAGAGGA
GTATTGTAAAGCGACGGGTCTTAGTAACTGCCGTGACCCAGCAGAAGCTGTAGCCGACGACATGGACAGTAGTGGTAGCCCCCATTACAGGGAGAAATCTGAGGAAGATG
GGGACACTGATGACATGCTTGGTGGTGTATTTGCTTTCTCTGAGGAAGAAAAATGA

mRNA sequence

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Protein sequence

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MKYSEGVTISDLKLNSPGLEENSDGISYPPIAKSVVDIKMEEKDGSVLPSPVMKENSFQERASVSSKQSSTGFSPVEGSDFTNSPSTVTSCSLSTDRTILKAVQSSKRGG
ASEGSNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSPHYREKSEEDGDTDDMLGGVFAFSEEEK

CSPI01G27000 (gene) of Cucumber (PI 183967) v1 genome