; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G27110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G27110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontrafficking protein particle complex subunit 6B
Genome locationChr1:22063133..22066404
RNA-Seq ExpressionCSPI01G27110
SyntenyCSPI01G27110
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0043087 - regulation of GTPase activity (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007194 - Transport protein particle (TRAPP) component
IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily
IPR037992 - TRAPP complex, Trs33 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135644.1 trafficking protein particle complex subunit 6B isoform X2 [Cucumis sativus]4.3e-94100Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_008450727.1 PREDICTED: trafficking protein particle complex subunit 6B isoform X1 [Cucumis melo]6.9e-9297.14Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ

Query:  DNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        DNRFRWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  DNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_008450728.1 PREDICTED: trafficking protein particle complex subunit 6B isoform X2 [Cucumis melo]1.3e-9399.42Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_031736214.1 trafficking protein particle complex subunit 6B isoform X1 [Cucumis sativus]3.1e-9297.16Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE-----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE     RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE-----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_038878648.1 trafficking protein particle complex subunit 6B [Benincasa hispida]1.1e-9298.25Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQ+ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

TrEMBL top hitse value%identityAlignment
A0A0A0M1M8 Uncharacterized protein2.1e-94100Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A1S3BP90 trafficking protein particle complex subunit 6B isoform X26.1e-9499.42Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A1S3BQW9 trafficking protein particle complex subunit 6B isoform X13.3e-9297.14Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ

Query:  DNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        DNRFRWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  DNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A5D3CG65 Trafficking protein particle complex subunit 6B isoform X26.1e-9499.42Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQNESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A6J1I0Q5 trafficking protein particle complex subunit 6B3.1e-9097.08Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVD-PQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        RWLTRMSVD PQ ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Subjt:  RWLTRMSVD-PQNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

SwissProt top hitse value%identityAlignment
F1QMV3 Trafficking protein particle complex subunit 6b1.1e-3147.41Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYF
        ++E +G++VG  L ER+T + PRF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT++S   Q               +     L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG++RGALSN+G+   V+A++S +PAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q32L78 Trafficking protein particle complex subunit 6B2.9e-3249.63Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYF
        ++E +G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q78XR0 Trafficking protein particle complex subunit 6A1.3e-2440.3Show/hide
Query:  IEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFP
        +E +G++VG  L ER  +E P F + L+A+KF+C+D W+ +F+K +D L+TNH+GT+VLQDN F  L  M   PQ               +     L F 
Subjt:  IEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYFP

Query:  CGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        CG++ GAL  LG    V+A +++LPAC F V I+
Subjt:  CGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q86SZ2 Trafficking protein particle complex subunit 6B2.9e-3249.63Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYF
        ++E +G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q9D289 Trafficking protein particle complex subunit 6B1.4e-3148.15Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYF
        ++E++G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR L ++S   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKVAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Arabidopsis top hitse value%identityAlignment
AT3G05000.1 Transport protein particle (TRAPP) component8.1e-8383.24Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVD++L EMV+ Y  RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRF+DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+F
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDP--QNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWL+R+S+DP  +NE+QD S  GE+K AQA SM+LYFPCGIIRG LSNLGIPCAVSADIS+LP CSFV+R+KA
Subjt:  RWLTRMSVDP--QNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGAGGTAGCAGAGAGTTGCGTTGACAGTCTTTTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGCCGCCCGTCGCAT
CGAGGCAATTGGTTATCAGGTTGGCCATCAGCTCTCCGAACGGTATACGATGGAGCGGCCTCGGTTCACGGATCATCTTGAAGCAATCAAATTTATCTGCAAGGACTTCT
GGTCCGAACTCTTCAAAAAGCAAATAGACAACTTGAAAACAAATCATAGGGGCACCTTTGTCTTGCAAGATAATCGATTCCGCTGGCTTACTCGCATGTCGGTGGATCCT
CAAAATGAATCACAAGATAATTCTGCAGATGGTGAAAACAAGGTAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATAAGAGGTGCTCTTTCAAATTT
GGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTTCATTTGTTGTTCGTATAAAGGCCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTGGTGCTGAATTGGTAATCATTCGTACGACATGTCGTCATTTAGTTGTTGAATCTAGACTGAGGGCGGAATCAAGGCAGTGACCCAATCGATCTTCTCTCATCCTCC
ATCTTGTTTTTGATTTCCTTCCCAATTCCGTCGAAGTGAGCTTCTTCAGCTTTCTACAATTCCACTTTGATCGAAGGTAAAAACACATGGGGAGAGAGGTAGCAGAGAGT
TGCGTTGACAGTCTTTTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGCCGCCCGTCGCATCGAGGCAATTGGTTATCAGGTTGG
CCATCAGCTCTCCGAACGGTATACGATGGAGCGGCCTCGGTTCACGGATCATCTTGAAGCAATCAAATTTATCTGCAAGGACTTCTGGTCCGAACTCTTCAAAAAGCAAA
TAGACAACTTGAAAACAAATCATAGGGGCACCTTTGTCTTGCAAGATAATCGATTCCGCTGGCTTACTCGCATGTCGGTGGATCCTCAAAATGAATCACAAGATAATTCT
GCAGATGGTGAAAACAAGGTAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATAAGAGGTGCTCTTTCAAATTTGGGAATTCCTTGTGCGGTTTCTGC
TGATATTTCAAATCTTCCAGCATGTTCATTTGTTGTTCGTATAAAGGCCTGATGAGAAGTGTATCAAAAAGTAGAGATTTTATCTTTGGGATATGAAGACTTGGTAGATC
CTTAACACCACCCTCCAGTTGCAATCCTTTCTGTTTTGTTTCCTTTTCTGCTTTCTTTATTCCTCTATCTTCTCCTAGTTCACAAAACTCTTAGCACAAAAATCTGTTGG
ACAAACGTTTGTTGTATGAAAGTCAATAGCGAATACTTTTCAGAATTTCATGATTGTAGAGATACATTGAAGTTTATTTTATATTATACCATTTGGGAGGATTGGTTCAT
ATGCTATGATTCTATAAAGATCAACTATCTAGAATGTTAAGGTTCTATGGGTTTCGAGATAATTAAAATATTGTAGAGTTGGT
Protein sequenceShow/hide protein sequence
MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDP
QNESQDNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA