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CSPI01G27160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G27160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionvesicle-associated protein 2-2-like
Genome locationChr1:22089592..22090801
RNA-Seq ExpressionCSPI01G27160
SyntenyCSPI01G27160
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
InterPro domainsIPR013783 - Immunoglobulin-like fold
IPR016763 - Vesicle-associated membrane-protein-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450732.1 PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo]4.5e-4883.59Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSK-NIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEIS
        MAPPDMKCKDKFLIQSTIVP EANLHED+TSTYNLFEKNG+K NIEER+L TILVKA + S TIE L V VSNQSKD +IEELKLKIT+LD+KLHEAEIS
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSK-NIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEIS

Query:  ISKLEEDKARIRKFKSQQKNCMVSCSIL
        ISKLEE+KARI+K KSQQKNC+VSCSIL
Subjt:  ISKLEEDKARIRKFKSQQKNCMVSCSIL

XP_022968793.1 vesicle-associated protein 2-2-like [Cucurbita maxima]4.3e-2254.76Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLR----VEVSNQSKDTEIEELKLKITELDRKLHEA
        +AP DM CKDKFLIQST+VP E N+ +D+TST  +F K+GSKNIEE +L TI+V     SP +E LR    +EV +QS D ++EELKLKIT+L+ KLHEA
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLR----VEVSNQSKDTEIEELKLKITELDRKLHEA

Query:  EISISKLEEDKARIRKFKSQQKNCMV
         ++ISKLE+++    K KS + NC +
Subjt:  EISISKLEEDKARIRKFKSQQKNCMV

XP_031736025.1 vesicle-associated protein 1-3-like [Cucumis sativus]3.9e-60100Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI
        MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI

Query:  SKLEEDKARIRKFKSQQKNCMVSCSIL
        SKLEEDKARIRKFKSQQKNCMVSCSIL
Subjt:  SKLEEDKARIRKFKSQQKNCMVSCSIL

XP_031736065.1 vesicle-associated protein 2-1-like [Cucumis sativus]5.9e-4885.27Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHED-LTSTYNLFEKNGSK-NIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEI
        MAPPDMKCKDKFLIQSTIVP E NLHED +TSTYNLFEKNGSK NIEERRL TILVK ES+SPTIETL V VSNQSKD EIEELKLKIT+LD+KLHEAEI
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHED-LTSTYNLFEKNGSK-NIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEI

Query:  SISKLEEDKARIRKFKSQQKNCMVSCSIL
        SISKLEE++ARI+K K QQKNC+VSCSIL
Subjt:  SISKLEEDKARIRKFKSQQKNCMVSCSIL

XP_038878617.1 LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida]5.9e-3270.31Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQ-SKDTEIEELKLKITELDRKLHEAEIS
        MAPPDMKCKDKFLIQSTIVP E    ED+TST NLF K+ SKNIEER L TILV + S+S T+E L V VSN+ S D +IEELKLKI ELD+KLHEAEI+
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQ-SKDTEIEELKLKITELDRKLHEAEIS

Query:  ISKLEEDKARIRKFKSQQKNCMVSCSIL
        ISKLE  K  ++K KSQQKNC+VSCS L
Subjt:  ISKLEEDKARIRKFKSQQKNCMVSCSIL

TrEMBL top hitse value%identityAlignment
A0A0A0LWK4 Uncharacterized protein1.8e-3484.16Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHED-LTSTYNLFEKNGSK-NIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEI
        MAPPDMKCKDKFLIQSTIVP E NLHED +TSTYNLFEKNGSK NIEERRL TILVK ES+SPTIETL V VSNQSKD EIEELKLKIT+LD+KLHE  +
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHED-LTSTYNLFEKNGSK-NIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEI

Query:  S
        S
Subjt:  S

A0A1S3BPU6 vesicle-associated protein 1-3-like2.2e-4883.59Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSK-NIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEIS
        MAPPDMKCKDKFLIQSTIVP EANLHED+TSTYNLFEKNG+K NIEER+L TILVKA + S TIE L V VSNQSKD +IEELKLKIT+LD+KLHEAEIS
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSK-NIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEIS

Query:  ISKLEEDKARIRKFKSQQKNCMVSCSIL
        ISKLEE+KARI+K KSQQKNC+VSCSIL
Subjt:  ISKLEEDKARIRKFKSQQKNCMVSCSIL

A0A6J1DM49 vesicle-associated protein 2-2-like5.1e-2151.49Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEV-------SNQSKDTEIEELKLKITELDRKL
        +APPDM CKDKFLI STIVP E  + ED+TS+ NLF ++  K IE+++L   LV+A + SP  E L  EV          + D  +E+LKL ITEL+ KL
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEV-------SNQSKDTEIEELKLKITELDRKL

Query:  HEAEISISKLEEDKARIRKFKSQQKNCMVSCSIL
        HEA+ +I KLEE++ RI++ KS +KNC+VSCSI+
Subjt:  HEAEISISKLEEDKARIRKFKSQQKNCMVSCSIL

A0A6J1HCB9 vesicle-associated protein 2-2-like1.1e-2052.46Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI
        +AP DM CKDKFLIQST+VP E  + +D+TST  +F K+GSKNIEE +L TI+V   +  P  + + +EV +QS D ++EELKLKIT+L+ KLHEA ++I
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI

Query:  SKLEEDKARIRKFKSQQKNCMV
        SKLE+++    K KS + NC +
Subjt:  SKLEEDKARIRKFKSQQKNCMV

A0A6J1HZ48 vesicle-associated protein 2-2-like2.1e-2254.76Show/hide
Query:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLR----VEVSNQSKDTEIEELKLKITELDRKLHEA
        +AP DM CKDKFLIQST+VP E N+ +D+TST  +F K+GSKNIEE +L TI+V     SP +E LR    +EV +QS D ++EELKLKIT+L+ KLHEA
Subjt:  MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLR----VEVSNQSKDTEIEELKLKITELDRKLHEA

Query:  EISISKLEEDKARIRKFKSQQKNCMV
         ++ISKLE+++    K KS + NC +
Subjt:  EISISKLEEDKARIRKFKSQQKNCMV

SwissProt top hitse value%identityAlignment
B9DHD7 Vesicle-associated protein 2-28.4e-0548.44Show/hide
Query:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETL
        PPDM CKDKFLIQST V  E    ED+T+  ++F K   K+IEE +L   LV   S SP +  +
Subjt:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETL

Q9LVU1 Vesicle-associated protein 2-19.3e-0428.33Show/hide
Query:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI--
        PPDM+CKDKFL+QSTIVP   ++ E    T   F K+  K + E +L    +   +T  + E+       QS +T        I+ + R   E + ++  
Subjt:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI--

Query:  -SKLEEDKARIRKFKSQQKN
          +L+ +   +R+ ++Q+ +
Subjt:  -SKLEEDKARIRKFKSQQKN

Arabidopsis top hitse value%identityAlignment
AT1G08820.1 vamp/synaptobrevin-associated protein 27-25.9e-0648.44Show/hide
Query:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETL
        PPDM CKDKFLIQST V  E    ED+T+  ++F K   K+IEE +L   LV   S SP +  +
Subjt:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETL

AT1G08820.2 vamp/synaptobrevin-associated protein 27-25.9e-0648.44Show/hide
Query:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETL
        PPDM CKDKFLIQST V  E    ED+T+  ++F K   K+IEE +L   LV   S SP +  +
Subjt:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETL

AT4G00170.1 Plant VAMP (vesicle-associated membrane protein) family protein7.3e-0430.43Show/hide
Query:  APPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRV---------EVSNQSKDTEIEELKLKITELDRK
        AP DM+CKDKFL+Q+ +V       E L     +F K   + IE+ +L  + + A   SP  E             ++++QS     +++     E   K
Subjt:  APPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRV---------EVSNQSKDTEIEELKLKITELDRK

Query:  LHEAEISISKLEEDK
          EA   ISKL E+K
Subjt:  LHEAEISISKLEEDK

AT5G47180.1 Plant VAMP (vesicle-associated membrane protein) family protein6.6e-0528.33Show/hide
Query:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI--
        PPDM+CKDKFL+QSTIVP   ++ E    T   F K+  K + E +L    +   +T  + E+       QS +T        I+ + R   E + ++  
Subjt:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI--

Query:  -SKLEEDKARIRKFKSQQKN
          +L+ +   +R+ ++Q+ +
Subjt:  -SKLEEDKARIRKFKSQQKN

AT5G47180.2 Plant VAMP (vesicle-associated membrane protein) family protein6.6e-0528.33Show/hide
Query:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI--
        PPDM+CKDKFL+QSTIVP   ++ E    T   F K+  K + E +L    +   +T  + E+       QS +T        I+ + R   E + ++  
Subjt:  PPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISI--

Query:  -SKLEEDKARIRKFKSQQKN
          +L+ +   +R+ ++Q+ +
Subjt:  -SKLEEDKARIRKFKSQQKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACCTGATATGAAATGCAAAGACAAGTTCTTAATCCAAAGCACAATAGTTCCCTTTGAGGCAAATCTTCATGAAGATTTGACTTCCACTTATAACTTGTTTGA
GAAAAATGGTAGCAAGAACATAGAAGAGAGGAGATTGGGTACAATCCTTGTTAAGGCCGAATCTACTTCTCCAACTATTGAAACATTGAGGGTTGAAGTTTCAAACCAAA
GTAAAGATACGGAAATAGAAGAGTTGAAGTTAAAGATCACTGAACTTGATCGAAAACTCCACGAGGCTGAAATTTCCATTTCAAAGCTAGAAGAGGATAAAGCTAGAATT
CGAAAGTTCAAATCCCAACAAAAGAATTGCATGGTTTCATGTTCAATTCTT
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACCTGATATGAAATGCAAAGACAAGTTCTTAATCCAAAGCACAATAGTTCCCTTTGAGGCAAATCTTCATGAAGATTTGACTTCCACTTATAACTTGTTTGA
GAAAAATGGTAGCAAGAACATAGAAGAGAGGAGATTGGGTACAATCCTTGTTAAGGCCGAATCTACTTCTCCAACTATTGAAACATTGAGGGTTGAAGTTTCAAACCAAA
GTAAAGATACGGAAATAGAAGAGTTGAAGTTAAAGATCACTGAACTTGATCGAAAACTCCACGAGGCTGAAATTTCCATTTCAAAGCTAGAAGAGGATAAAGCTAGAATT
CGAAAGTTCAAATCCCAACAAAAGAATTGCATGGTTTCATGTTCAATTCTT
Protein sequenceShow/hide protein sequence
MAPPDMKCKDKFLIQSTIVPFEANLHEDLTSTYNLFEKNGSKNIEERRLGTILVKAESTSPTIETLRVEVSNQSKDTEIEELKLKITELDRKLHEAEISISKLEEDKARI
RKFKSQQKNCMVSCSIL