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CSPI01G27290 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G27290
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA cytidine acetyltransferase
Genome locationChr1:22171102..22171278
RNA-Seq ExpressionCSPI01G27290
SyntenyCSPI01G27290
Gene Ontology termsGO:0000154 - rRNA modification (biological process)
GO:0042274 - ribosomal small subunit biogenesis (biological process)
GO:0051391 - tRNA acetylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008080 - N-acetyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055962.1 RNA cytidine acetyltransferase 1-like isoform X2 [Cucumis melo var. makuwa]5.2e-1581.97Show/hide
Query:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
        MGV D++L KYGIENRE+ELKQALQQCNSLSKSGLISVKSS + P KLDM VTSS+RKRKH
Subjt:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
KGN66150.1 hypothetical protein Csa_007399 [Cucumis sativus]6.4e-2194.92Show/hide
Query:  MGVDIELHKYGIENRESELKQALQQCNSLSKSGLISVKSSSHPDKLDMGVTSSERKRKH
        MGVDIELHKYGIENRE ELKQALQQCNSLSKSGLISVKSSS PDKLDMGVTSS+RKRKH
Subjt:  MGVDIELHKYGIENRESELKQALQQCNSLSKSGLISVKSSSHPDKLDMGVTSSERKRKH
TYK10177.1 RNA cytidine acetyltransferase 1-like [Cucumis melo var. makuwa]2.0e-1481.97Show/hide
Query:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
        MGV DIEL +YGIENRE+ELKQALQQC+SLSKSGLISVKSS + P KLDM VTSS+RKRKH
Subjt:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
XP_008450325.1 PREDICTED: RNA cytidine acetyltransferase 1-like isoform X2 [Cucumis melo]5.2e-1581.97Show/hide
Query:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
        MGV D++L KYGIENRE+ELKQALQQCNSLSKSGLISVKSS + P KLDM VTSS+RKRKH
Subjt:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
XP_016900870.1 PREDICTED: RNA cytidine acetyltransferase 1-like isoform X1 [Cucumis melo]5.2e-1581.97Show/hide
Query:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
        MGV D++L KYGIENRE+ELKQALQQCNSLSKSGLISVKSS + P KLDM VTSS+RKRKH
Subjt:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
TrEMBL top hitse value%identityAlignment
A0A0A0LW73 Uncharacterized protein3.1e-2194.92Show/hide
Query:  MGVDIELHKYGIENRESELKQALQQCNSLSKSGLISVKSSSHPDKLDMGVTSSERKRKH
        MGVDIELHKYGIENRE ELKQALQQCNSLSKSGLISVKSSS PDKLDMGVTSS+RKRKH
Subjt:  MGVDIELHKYGIENRESELKQALQQCNSLSKSGLISVKSSSHPDKLDMGVTSSERKRKH
A0A1S3BPM7 RNA cytidine acetyltransferase2.5e-1581.97Show/hide
Query:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
        MGV D++L KYGIENRE+ELKQALQQCNSLSKSGLISVKSS + P KLDM VTSS+RKRKH
Subjt:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
A0A1S3BQL3 RNA cytidine acetyltransferase9.6e-1581.97Show/hide
Query:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
        MGV DIEL +YGIENRE+ELKQALQQC+SLSKSGLISVKSS + P KLDM VTSS+RKRKH
Subjt:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
A0A1S4DYS3 RNA cytidine acetyltransferase2.5e-1581.97Show/hide
Query:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
        MGV D++L KYGIENRE+ELKQALQQCNSLSKSGLISVKSS + P KLDM VTSS+RKRKH
Subjt:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
A0A5A7UJA5 RNA cytidine acetyltransferase2.5e-1581.97Show/hide
Query:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
        MGV D++L KYGIENRE+ELKQALQQCNSLSKSGLISVKSS + P KLDM VTSS+RKRKH
Subjt:  MGV-DIELHKYGIENRESELKQALQQCNSLSKSGLISVKSS-SHPDKLDMGVTSSERKRKH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTGATATCGAATTGCATAAATATGGGATTGAAAATAGAGAAAGTGAATTGAAGCAGGCTCTTCAACAATGCAATTCATTATCAAAAAGTGGTCTTATTAGTGT
CAAATCATCTTCTCACCCCGATAAGTTGGATATGGGCGTTACAAGTTCCGAGAGAAAAAGAAAACAT
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTTGATATCGAATTGCATAAATATGGGATTGAAAATAGAGAAAGTGAATTGAAGCAGGCTCTTCAACAATGCAATTCATTATCAAAAAGTGGTCTTATTAGTGT
CAAATCATCTTCTCACCCCGATAAGTTGGATATGGGCGTTACAAGTTCCGAGAGAAAAAGAAAACAT
Protein sequenceShow/hide protein sequence
MGVDIELHKYGIENRESELKQALQQCNSLSKSGLISVKSSSHPDKLDMGVTSSERKRKH