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CSPI01G28090 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G28090
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionWD repeat containing protein
Genome locationChr1:22818402..22821246
RNA-Seq ExpressionCSPI01G28090
SyntenyCSPI01G28090
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588036.1 hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3265.35Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQ------------VEKQSDSEIITEIPSTIMVDTTGIVTE
        M DPRA L S SS   LPPND LPRRFKV+WRVLLISNFALSAYMFASARK+   Q+END+            +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQ------------VEKQSDSEIITEIPSTIMVDTTGIVTE

Query:  NVLEDQQQEPNQGVVSGWREKLGFSRK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NVLEDQQQEPNQGVVSGWREKLGFSRK
XP_004135711.1 uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]1.2e-5597.44Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ
        MTDPRAPLPSSSSSTYLPPNDSLP+RFKVLWRVLLISNFALSAYMFASARKRHFNQ+ENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEP+Q
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ

Query:  GVVSGWREKLGFSRKVN
        GVVSGWREKLGFSRKVN
Subjt:  GVVSGWREKLGFSRKVN
XP_008450851.1 PREDICTED: uncharacterized protein LOC103492320 [Cucumis melo]5.7e-5393.16Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ
        MT  R PLPSSSSSTYLPPNDSLP+RFKVLWR+LLISNFALSAYMFASARKRHFN++ENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ

Query:  GVVSGWREKLGFSRKVN
        GVVSGWREKLGFSRK+N
Subjt:  GVVSGWREKLGFSRKVN
XP_022968528.1 uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]4.2e-3265.35Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARK------------RHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTE
        M DPRA L S SS   LPPND LPRRFKV+WRVLLISNFALSAYMFASARK            +   Q+END +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARK------------RHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTE

Query:  NVLEDQQQEPNQGVVSGWREKLGFSRK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NVLEDQQQEPNQGVVSGWREKLGFSRK
XP_023530326.1 uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]6.5e-3365.35Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQ------------VEKQSDSEIITEIPSTIMVDTTGIVTE
        M DPRA L S SS   LPPND LPRRFKV+WRVLLISNFALSAYMFASARK+   Q+END+            +EK SDSEI+ EIPST+MVDTTGIVTE
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQ------------VEKQSDSEIITEIPSTIMVDTTGIVTE

Query:  NVLEDQQQEPNQGVVSGWREKLGFSRK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NVLEDQQQEPNQGVVSGWREKLGFSRK
TrEMBL top hitse value%identityAlignment
A0A0A0M1X9 Uncharacterized protein5.9e-5697.44Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ
        MTDPRAPLPSSSSSTYLPPNDSLP+RFKVLWRVLLISNFALSAYMFASARKRHFNQ+ENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEP+Q
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ

Query:  GVVSGWREKLGFSRKVN
        GVVSGWREKLGFSRKVN
Subjt:  GVVSGWREKLGFSRKVN
A0A1S3BR82 uncharacterized protein LOC1034923202.7e-5393.16Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ
        MT  R PLPSSSSSTYLPPNDSLP+RFKVLWR+LLISNFALSAYMFASARKRHFN++ENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ

Query:  GVVSGWREKLGFSRKVN
        GVVSGWREKLGFSRK+N
Subjt:  GVVSGWREKLGFSRKVN
A0A6J1D315 uncharacterized protein LOC1110165444.7e-2970.3Show/hide
Query:  MTDPRAPLPSSSS-STYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPN
        MTDPRAPLPSSSS    LPPND LPRRFKV+WRVLLISNFAL+AYMFA+ARK+   ++E D VEK SD E++T IPST+MVDTT I  EN+ ED Q+EP 
Subjt:  MTDPRAPLPSSSS-STYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPN

Query:  Q
        Q
Subjt:  Q
A0A6J1EIP0 uncharacterized protein LOC1114337162.3e-3164.57Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARK------------RHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTE
        M DPRA L S SS   L PND LPRRFKV+WRVLLISNFALSAYMFASARK            +   Q+END +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARK------------RHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTE

Query:  NVLEDQQQEPNQGVVSGWREKLGFSRK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NVLEDQQQEPNQGVVSGWREKLGFSRK
A0A6J1HYA0 uncharacterized protein LOC111467730 isoform X12.0e-3265.35Show/hide
Query:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARK------------RHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTE
        M DPRA L S SS   LPPND LPRRFKV+WRVLLISNFALSAYMFASARK            +   Q+END +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARK------------RHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTE

Query:  NVLEDQQQEPNQGVVSGWREKLGFSRK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NVLEDQQQEPNQGVVSGWREKLGFSRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55160.1 unknown protein6.8e-0426Show/hide
Query:  PPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN
        PP +S  RR+K +W +LL  N A+  Y+F   +K+  + V  +   K S       +  T+   +T +    V++ ++  P +     ++  L   RKVN
Subjt:  PPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN
AT1G55160.2 unknown protein6.8e-0426Show/hide
Query:  PPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN
        PP +S  RR+K +W +LL  N A+  Y+F   +K+  + V  +   K S       +  T+   +T +    V++ ++  P +     ++  L   RKVN
Subjt:  PPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGACCCACGAGCGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAGACGCTTCAAGGTCTTATGGCGGGTTCTATTGATCTC
CAATTTCGCTCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATCAGGTGGAGAATGATCAAGTAGAAAAACAAAGTGATAGTGAAATTATTACAGAAA
TCCCTTCAACAATTATGGTGGATACCACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAGGGGGTGGTTAGTGGTTGGAGAGAAAAGTTA
GGATTTAGTAGAAAAGTGAATTGA
mRNA sequenceShow/hide mRNA sequence
AAACTAGAGAATTTTTTTCACAATTTTTTAAAAGAAGGGACCAAAGGAACATTGCTTGCTTGACGCACACACAAGAGAACACAAAAAACCGAGCAGCGGCAGGCAACGCG
AGTTCAAACTTCAACTACTTTCAATGACGGACCCACGAGCGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAGACGCTTCAAGGTC
TTATGGCGGGTTCTATTGATCTCCAATTTCGCTCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATCAGGTGGAGAATGATCAAGTAGAAAAACAAAG
TGATAGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACCACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAGGGGGTGG
TTAGTGGTTGGAGAGAAAAGTTAGGATTTAGTAGAAAAGTGAATTGATAGTGAGATGTTGATTCTTTAAACAGTTCATTCTCTCATAACCGATTGAAGCTCATTCAGGTA
AATATGGTGGGTTGCTGCAAAATTTTCTTTAAGACTATTTTGTAGGCGAATGATTTATTGCGGTAGATTTGTTTGCTTGTAATATAATTCTAAGAATATTAGCTCATATA
ATCATCATTTTTT
Protein sequenceShow/hide protein sequence
MTDPRAPLPSSSSSTYLPPNDSLPRRFKVLWRVLLISNFALSAYMFASARKRHFNQVENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKL
GFSRKVN