; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G28400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G28400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:23098728..23099583
RNA-Seq ExpressionCSPI01G28400
SyntenyCSPI01G28400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66267.1 hypothetical protein Csa_007222 [Cucumis sativus]8.9e-4997.03Show/hide
Query:  MSDCNLISAVEDLKSEEDRLAADKWQLAIMKLRCCGCWMILTSAIWMQQSSIRNSQEDNVTMEHFITSNGQVSLGKRCWELTEGNVSLRTKSVFTRFGSG
        MSDCNLISA EDLKSEEDRLAADKWQLAIMKLRCCGCWMILTSAIWMQQSSIRNSQEDNVTMEHFITSNG VSLGKRCWELTEGNVSLRTKSVFTRFGS 
Subjt:  MSDCNLISAVEDLKSEEDRLAADKWQLAIMKLRCCGCWMILTSAIWMQQSSIRNSQEDNVTMEHFITSNGQVSLGKRCWELTEGNVSLRTKSVFTRFGSG

Query:  K
        K
Subjt:  K
TrEMBL top hitse value%identityAlignment
A0A0A0LZH1 Uncharacterized protein4.3e-4997.03Show/hide
Query:  MSDCNLISAVEDLKSEEDRLAADKWQLAIMKLRCCGCWMILTSAIWMQQSSIRNSQEDNVTMEHFITSNGQVSLGKRCWELTEGNVSLRTKSVFTRFGSG
        MSDCNLISA EDLKSEEDRLAADKWQLAIMKLRCCGCWMILTSAIWMQQSSIRNSQEDNVTMEHFITSNG VSLGKRCWELTEGNVSLRTKSVFTRFGS 
Subjt:  MSDCNLISAVEDLKSEEDRLAADKWQLAIMKLRCCGCWMILTSAIWMQQSSIRNSQEDNVTMEHFITSNGQVSLGKRCWELTEGNVSLRTKSVFTRFGSG

Query:  K
        K
Subjt:  K
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACCATCAGGAGTTTGAACCTTGTTAGACTTCATACCAGAACTTTGAGCATTCCTTATTGTAAATTATTTATTCTTTCCTTAAATGATCACTTCCATGGAAAATT
AATGTCCGATTGCAACCTCATCTCGGCCGTGGAGGATTTGAAATCAGAGGAAGACAGGCTAGCAGCAGACAAATGGCAGCTCGCCATCATGAAGCTGAGGTGCTGTGGAT
GTTGGATGATTCTTACAAGTGCAATATGGATGCAGCAATCATCTATCAGAAACTCACAGGAAGACAATGTCACAATGGAGCATTTTATAACCTCAAATGGGCAGGTTAGT
CTTGGAAAACGATGTTGGGAACTCACAGAAGGCAATGTTAGCCTCAGAACAAAGTCAGTCTTCACCAGATTTGGGAGTGGTAAATTCTTTGATTGTTTAGCAATTGCTTT
GGACAAATTTTCAACATGCTACAACCTTTCTTTGATGTCCTGCTAG
mRNA sequenceShow/hide mRNA sequence
CAGAGACAACACATCGATGGGCTAAGCAAGGTGTTCTGAACTTTTTTTTGTAGCTTCTCATGAGTGTTAAGGCTTCTATAAGCGAGCGACCATAAGAAAAACTTCACCTT
CTTCTTTACCATACAACTATTTGTTGACTGCGATATTTACAAAGAAATTGTAATCAATGGGAGATGGACACCATCAGGAGTTTGAACCTTGTTAGACTTCATACCAGAAC
TTTGAGCATTCCTTATTGTAAATTATTTATTCTTTCCTTAAATGATCACTTCCATGGAAAATTAATGTCCGATTGCAACCTCATCTCGGCCGTGGAGGATTTGAAATCAG
AGGAAGACAGGCTAGCAGCAGACAAATGGCAGCTCGCCATCATGAAGCTGAGGTGCTGTGGATGTTGGATGATTCTTACAAGTGCAATATGGATGCAGCAATCATCTATC
AGAAACTCACAGGAAGACAATGTCACAATGGAGCATTTTATAACCTCAAATGGGCAGGTTAGTCTTGGAAAACGATGTTGGGAACTCACAGAAGGCAATGTTAGCCTCAG
AACAAAGTCAGTCTTCACCAGATTTGGGAGTGGTAAATTCTTTGATTGTTTAGCAATTGCTTTGGACAAATTTTCAACATGCTACAACCTTTCTTTGATGTCCTGCTAGA
TAAGGAACAATGGGATGATAGAAGGTCTCCTCACAAATCAAAGATGCAACCAAATGGCCCATAATCTGGCAAACCATCTTAGAACATCAACAGCACTAGTGTCGATCGAA
GACCATTCCCTTAGGTGCATTCTGCCCGTAAACCTTTATGTTTCTTTTTCTCATGTGGTTTTTAGTTTTGTTTCTCCAAGCTTTCT
Protein sequenceShow/hide protein sequence
MDTIRSLNLVRLHTRTLSIPYCKLFILSLNDHFHGKLMSDCNLISAVEDLKSEEDRLAADKWQLAIMKLRCCGCWMILTSAIWMQQSSIRNSQEDNVTMEHFITSNGQVS
LGKRCWELTEGNVSLRTKSVFTRFGSGKFFDCLAIALDKFSTCYNLSLMSC