; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G28570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G28570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA-directed RNA polymerase III subunit RPC4
Genome locationChr1:23211039..23213764
RNA-Seq ExpressionCSPI01G28570
SyntenyCSPI01G28570
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055789.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo var. makuwa]1.5e-14084.81Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQN ASQ RQKTCSMNELPSGS+                              DFVFLLTPVLKSGQVSSGMDCGFAQEVAAIN+EGK CCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSML+NIEDL
Subjt:  ILTPDVDSMLKNIEDL

TYK10040.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo var. makuwa]1.4e-13080.38Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFN S            APTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQN ASQ RQKTCSMNELPSG                              + DFVFLLTPVLKSGQVSSGMDCGFAQEVAAIN+EGK CCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSML+NIEDL
Subjt:  ILTPDVDSMLKNIEDL

XP_004144123.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus]6.8e-15492.72Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYD                       VSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSMLKNIEDL
Subjt:  ILTPDVDSMLKNIEDL

XP_008450913.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo]2.6e-14587.03Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQN ASQ RQKTCSMNELPSGS+GKLLVYRSGAVKLKLGDIIYD                       VSSGMDCGFAQEVAAIN+EGK CCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSML+NIEDL
Subjt:  ILTPDVDSMLKNIEDL

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]3.6e-13982.91Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTAAPRKLKFAPKAP+RRIPKPEVKAE+AEDADAAQARDLLKRFNEST R KQ++GRKAAPTQVAFGSGG+SSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN  YDENTTT AM+LGLLEENPE DV FLQLPPMVPM+KQSS+VE  G+ NS 
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQ+K SQPRQK C MNELPSGS+GKLLVYRSGAVKLKLGDIIYD                       VSSGMDCGFAQ+VAA+NVEGK CCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDS+LKNIEDL
Subjt:  ILTPDVDSMLKNIEDL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein3.3e-15492.72Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYD                       VSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSMLKNIEDL
Subjt:  ILTPDVDSMLKNIEDL

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC41.3e-14587.03Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQN ASQ RQKTCSMNELPSGS+GKLLVYRSGAVKLKLGDIIYD                       VSSGMDCGFAQEVAAIN+EGK CCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSML+NIEDL
Subjt:  ILTPDVDSMLKNIEDL

A0A5A7UQN3 DNA-directed RNA polymerase III subunit RPC47.2e-14184.81Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQN ASQ RQKTCSMNELPSGS+                              DFVFLLTPVLKSGQVSSGMDCGFAQEVAAIN+EGK CCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSML+NIEDL
Subjt:  ILTPDVDSMLKNIEDL

A0A5D3CFB5 DNA-directed RNA polymerase III subunit RPC46.7e-13180.38Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFN S            APTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQN ASQ RQKTCSMNELPSG                              + DFVFLLTPVLKSGQVSSGMDCGFAQEVAAIN+EGK CCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSML+NIEDL
Subjt:  ILTPDVDSMLKNIEDL

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc41.4e-12876.58Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKN T A RK+KFAPKAP RR+PKPEVKAE+ E+ADAAQA+DLLKRFNEST RAKQ+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS
        TLP+S SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPE +V FLQ+PPMVP+ KQSS+VE M + +SS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSS

Query:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA
        EQ+K S+ RQ  CS+NELPSGS+GKLLVYRSGAVKLKLGDI+YD                       VSSGMDCGFAQ+VAAINVEGK CCIVGELSKRA
Subjt:  EQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRA

Query:  ILTPDVDSMLKNIEDL
        ILTPDVDSMLK+IEDL
Subjt:  ILTPDVDSMLKNIEDL

SwissProt top hitse value%identityAlignment
P05423 DNA-directed RNA polymerase III subunit RPC43.2e-0524.03Show/hide
Query:  EADVLFLQLPPMVPMIKQSSSV-----EDMGSGN-----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLL
        E ++LFLQLP  +P    +  +     E  G          E+++ ++  +  C++ +L  G +GKLL+ +SG V+L LG +  D               
Subjt:  EADVLFLQLPPMVPMIKQSSSV-----EDMGSGN-----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLL

Query:  TPVLKSGQVSSGMDCGFAQEVAAINVEGKR---CCIVGELSKRAILTPDVDSML
                V+ G  C F QE+ ++ +   R     ++G +  + + +PD +S+L
Subjt:  TPVLKSGQVSSGMDCGFAQEVAAINVEGKR---CCIVGELSKRAILTPDVDSML

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC48.5e-0623.81Show/hide
Query:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLR--RPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVE
        P+ ED  +     K   EP D      +  PLR  R   G P  ++  E                    L  L    E ++LFLQLP  +P    +  ++
Subjt:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLR--RPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVE

Query:  DMGSGNSSE--------QNKASQPR--QKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAA
         + +   SE        Q K  + R  + TC++ +L  G +GKLL+ +SG V+L LG +  D                       V+ G  C F QE+ +
Subjt:  DMGSGNSSE--------QNKASQPR--QKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAA

Query:  INVEGKR---CCIVGELSKRAILTPDVDSML
        + +   R     ++G +  + + +P+ +S+L
Subjt:  INVEGKR---CCIVGELSKRAILTPDVDSML

Q91WD1 DNA-directed RNA polymerase III subunit RPC49.4e-0521.83Show/hide
Query:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSV---
        P+ ED  +     K   EP D      V  P R                  +  L  D +       L L+++    ++LFLQLP  +P    +  +   
Subjt:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSV---

Query:  --EDMGSGN-----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAIN
          E  G          E+++ ++  +  C++ +L  G +GKLL+ +SG V+L LG +  D                       V+ G  C F QE+ ++ 
Subjt:  --EDMGSGN-----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAIN

Query:  VEGKR---CCIVGELSKRAILTPDVDSML
        +   R     ++G +  + + +PD +S+L
Subjt:  VEGKR---CCIVGELSKRAILTPDVDSML

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC44.9e-3331.14Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIP-KPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNE-
        M+    K+K    R+ +  P  P RR+P  P    E  ED +  +A    ++F+      + +   KA+  +VAF    S   +RS+GV K  ++P ++ 
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIP-KPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNE-

Query:  DGTLPAS------------------------TSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLE-ENPEAD
        + + PAS                        T  +YVEPWDY  SYYP  LPLR+P SG+ + L++EEFGE ++N  YDENT  +A  LGL   ++ +  
Subjt:  DGTLPAS------------------------TSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLE-ENPEAD

Query:  VLFLQLPPMVPMIKQSS------SVEDMGSGNSSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSG
        +   ++P  +P++KQ++      SV +  SG S+                 LP G +GK+LVY+SGAVKLK+GD ++D                      
Subjt:  VLFLQLPPMVPMIKQSS------SVEDMGSGNSSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSG

Query:  QVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL
         VS G       +V AI+++G+ C  +G  +K   +TPDV+S+L    D+
Subjt:  QVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL

AT5G09380.1 RNA polymerase III RPC47.8e-5542.9Show/hide
Query:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAED-ADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        MEQ PP       RK+KFAPKAP +R+PKPEVK EV ED +++AQA +LL+R NE + R K +  +K   +QVA+  GG  ++ RS   +K  NR     
Subjt:  MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAED-ADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNS
        G+  ++   EY EPWDYYSYYP+TLP+RRPY+G+P+ L+ EEF +A     + E++   A NLGL+E++ E  + F++L P VP+   S+  E++     
Subjt:  GTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNS

Query:  SEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKR
        +  N      +KT  +  LP G +GKLLVY+SGAVK+KLG+++YD                       VS G+   FAQ+V  +N E K CC+VG++ K 
Subjt:  SEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKR

Query:  AILTPDVDSMLKNIEDL
        A+LTPD+DS+LK+IE++
Subjt:  AILTPDVDSMLKNIEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAAATCCACCAAAAAACAAGACAGCTGCTCCAAGGAAGTTGAAATTTGCTCCAAAAGCACCTGTCCGGCGTATACCAAAACCTGAAGTCAAAGCAGAAGTAGC
AGAGGATGCTGATGCTGCTCAAGCCAGGGATTTACTTAAACGCTTCAATGAAAGCACCCAGAGGGCAAAGCAAAGAGTTGGGAGAAAAGCGGCACCTACACAAGTTGCAT
TTGGCTCTGGAGGTTCATCGAGCACCCTAAGATCATATGGTGTTTCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGGCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTCTGCGGAGACCATATTCAGGAAATCCAGATTCTCTAAACGAGGAAGAATTTGGTGAGGCTTCAGA
AAACTTAACCTACGATGAAAATACAACAACTGCAGCAATGAATCTTGGTCTATTGGAGGAGAACCCGGAGGCAGATGTCCTTTTTTTACAATTACCACCTATGGTGCCTA
TGATAAAGCAATCTTCTTCAGTAGAAGACATGGGGTCAGGCAACAGCTCAGAACAAAACAAGGCCTCACAACCTCGACAGAAAACCTGCTCTATGAATGAGTTACCTTCT
GGCTCCATTGGTAAACTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAACTTGGCGATATCATATATGATGGGCTATTCTTAGATGAAATCTATTCGGATTTTGTGTT
CCTTCTCACACCTGTTCTAAAATCTGGACAGGTTTCTTCTGGAATGGATTGTGGCTTTGCTCAAGAAGTTGCAGCTATCAACGTGGAAGGGAAGCGTTGCTGCATCGTTG
GGGAGCTTAGCAAGCGTGCCATTTTAACACCAGATGTGGACTCAATGTTAAAGAATATTGAGGATTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAAATCCACCAAAAAACAAGACAGCTGCTCCAAGGAAGTTGAAATTTGCTCCAAAAGCACCTGTCCGGCGTATACCAAAACCTGAAGTCAAAGCAGAAGTAGC
AGAGGATGCTGATGCTGCTCAAGCCAGGGATTTACTTAAACGCTTCAATGAAAGCACCCAGAGGGCAAAGCAAAGAGTTGGGAGAAAAGCGGCACCTACACAAGTTGCAT
TTGGCTCTGGAGGTTCATCGAGCACCCTAAGATCATATGGTGTTTCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGGCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTCTGCGGAGACCATATTCAGGAAATCCAGATTCTCTAAACGAGGAAGAATTTGGTGAGGCTTCAGA
AAACTTAACCTACGATGAAAATACAACAACTGCAGCAATGAATCTTGGTCTATTGGAGGAGAACCCGGAGGCAGATGTCCTTTTTTTACAATTACCACCTATGGTGCCTA
TGATAAAGCAATCTTCTTCAGTAGAAGACATGGGGTCAGGCAACAGCTCAGAACAAAACAAGGCCTCACAACCTCGACAGAAAACCTGCTCTATGAATGAGTTACCTTCT
GGCTCCATTGGTAAACTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAACTTGGCGATATCATATATGATGGGCTATTCTTAGATGAAATCTATTCGGATTTTGTGTT
CCTTCTCACACCTGTTCTAAAATCTGGACAGGTTTCTTCTGGAATGGATTGTGGCTTTGCTCAAGAAGTTGCAGCTATCAACGTGGAAGGGAAGCGTTGCTGCATCGTTG
GGGAGCTTAGCAAGCGTGCCATTTTAACACCAGATGTGGACTCAATGTTAAAGAATATTGAGGATTTATAA
Protein sequenceShow/hide protein sequence
MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDGTLPASTSKEY
VEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSSEQNKASQPRQKTCSMNELPS
GSIGKLLVYRSGAVKLKLGDIIYDGLFLDEIYSDFVFLLTPVLKSGQVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL