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CSPI01G28630 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G28630
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationChr1:23250710..23251243
RNA-Seq ExpressionCSPI01G28630
SyntenyCSPI01G28630
Gene Ontology termsGO:0046658 - anchored component of plasma membrane (cellular component)
GO:0016798 - hydrolase activity, acting on glycosyl bonds (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652284.1 hypothetical protein Csa_021876 [Cucumis sativus]2.5e-3656.41Show/hide
Query:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT
        MVA+S+IV      F   +    + NNLPPPWKVVQLCEKYN R IRF+E +L+I+++F          IE+SFSVP +LI N+AT+ T +EEWF   + 
Subjt:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT

Query:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
         FI +FTINY+VVG+ VIP LD+NILP M+ L DLLNS YLGQVKITT+ GL++LG
Subjt:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

KAE8653452.1 hypothetical protein Csa_007531 [Cucumis sativus]1.0e-3757.42Show/hide
Query:  VALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCITL
        VA+S+IVV         +    + NNLPPPWKVVQLCEKYN R IRF+E +L+I+++F          IE+SFSVP +LI N+AT+HT +EEWFV  +  
Subjt:  VALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCITL

Query:  FINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
        FI +FTINY+VVG+ VIP LD+NILP M+ L DLLNS YLGQVKITT+ GL++LG
Subjt:  FINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

TYK10032.1 lichenase-2-like [Cucumis melo var. makuwa]2.3e-3757.69Show/hide
Query:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT
        MVA+S+IVV AY      +   L++NNLP PWKV+QLCEKYN R IR DE +L++I+ F          IE+SF V N LI N AT+HT +EEWF N I 
Subjt:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT

Query:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
         FI+D TINY+VVG+  +P LDN+ILP MK L DLLN  +LGQVKITTL GLS+LG
Subjt:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

XP_031742604.1 glucan endo-1,3-beta-glucosidase-like [Cucumis sativus]2.7e-3857.69Show/hide
Query:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT
        MVA+S+IVV         +    + NNLPPPWKVVQLCEKYN R IRF+E +L+I+++F          IE+SFSVP +LI N+AT+HT +EEWFV  + 
Subjt:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT

Query:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
         FI +FTINY+VVG+ VIP LD+NILP M+ L DLLNS YLGQVKITT+ GL++LG
Subjt:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

XP_031742611.1 glucan endo-1,3-beta-glucosidase-like [Cucumis sativus]2.7e-3857.69Show/hide
Query:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT
        MVA+S+IVV         +    + NNLPPPWKVVQLCEKYN R IRF+E +L+I+++F          IE+SFSVP +LI N+AT+HT +EEWFV  + 
Subjt:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT

Query:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
         FI +FTINY+VVG+ VIP LD+NILP M+ L DLLNS YLGQVKITT+ GL++LG
Subjt:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

TrEMBL top hitse value%identityAlignment
A0A0A0LR03 (1->3)-beta-glucan endohydrolase1.4e-3757.05Show/hide
Query:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT
        MVA+S+IV      F   +    + NNLPPPWKVVQLCEKYN R IRF+E +L+I+++F          IE+SFSVP +LI N+AT+ T +EEWFV  + 
Subjt:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT

Query:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
         FI +FTINY+VVG+ VIP LD+NILP M+ L DLLNS YLGQVKITT+ GL++LG
Subjt:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

A0A0A0M247 Uncharacterized protein2.5e-6678.09Show/hide
Query:  MVAL-SNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCI
        MVAL SNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCI                                     RATDHTTMEEWFVNCI
Subjt:  MVAL-SNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCI

Query:  TLFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLGNISLMLLAYIPVKHMLITWEI
        TLFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSW+LGQVKITTLFGLSSLGNISLMLLAYIPVKHMLITWEI
Subjt:  TLFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLGNISLMLLAYIPVKHMLITWEI

A0A5A7UIV1 (1->3)-beta-glucan endohydrolase4.6e-3657.69Show/hide
Query:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT
        MVA+S+IVV AY      +    + NNLPPP KVVQLC+KYN R IRF E + +II  F          IELSFSV  +LI N AT+HT +EEWFVN + 
Subjt:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT

Query:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
         FI DFTINY++VG+  IP LD+NILP MK L  LLN  YLGQVKITTL GL++LG
Subjt:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

A0A5A7UQE4 (1->3)-beta-glucan endohydrolase3.5e-3655.77Show/hide
Query:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT
        MV +S+IV+ AY      +   L++NNLP PWKV+QLCEKYN R IR DE +L++I+ F          IE+SF V N LI N AT+HT +EEWF N I 
Subjt:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT

Query:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
         FI+D TINY+VVG+  +P LD++ILP MK L DLLN  +LGQVKITTL GLS+LG
Subjt:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

A0A5D3CFE1 (1->3)-beta-glucan endohydrolase1.1e-3757.69Show/hide
Query:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT
        MVA+S+IVV AY      +   L++NNLP PWKV+QLCEKYN R IR DE +L++I+ F          IE+SF V N LI N AT+HT +EEWF N I 
Subjt:  MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCIT

Query:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG
         FI+D TINY+VVG+  +P LDN+ILP MK L DLLN  +LGQVKITTL GLS+LG
Subjt:  LFINDFTINYMVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLG

SwissProt top hitse value%identityAlignment
Q9FJU9 Glucan endo-1,3-beta-glucosidase 132.0e-0426.47Show/hide
Query:  ANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCITLFINDFTINYMVVGENVI--PKLD
        A++LP P KVVQL +++N + +R  + +  ++K F          IEL   VPN  +   +   + ++ W  N +  +     I Y+ VG      P ++
Subjt:  ANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCITLFINDFTINYMVVGENVI--PKLD

Query:  NN--ILPAMKFLLDLLNSWYLG-QVKITTLFGLSSL
         +  ++PAM+ +L  L    L  ++K++T   L  L
Subjt:  NN--ILPAMKFLLDLLNSWYLG-QVKITTLFGLSSL

Arabidopsis top hitse value%identityAlignment
AT5G56590.1 O-Glycosyl hydrolases family 17 protein1.4e-0526.47Show/hide
Query:  ANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCITLFINDFTINYMVVGENVI--PKLD
        A++LP P KVVQL +++N + +R  + +  ++K F          IEL   VPN  +   +   + ++ W  N +  +     I Y+ VG      P ++
Subjt:  ANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCITLFINDFTINYMVVGENVI--PKLD

Query:  NN--ILPAMKFLLDLLNSWYLG-QVKITTLFGLSSL
         +  ++PAM+ +L  L    L  ++K++T   L  L
Subjt:  NN--ILPAMKFLLDLLNSWYLG-QVKITTLFGLSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCCCTGTCAAATATTGTCGTCGATGCATATACAACATTCTTCTCGATGCATACTATTGCTTTGAAGGCAAACAACCTCCCACCACCATGGAAGGTGGTGCAACT
CTGTGAAAAATACAACAATCGTTGCATTCGGTTTGATGAACTAGATCTCAATATTATCAAAGAGTTTTTGTGGCACATACATCGAACTCTCCTTTACATCGAACTCTCCT
TTAGTGTACCAAATCAGTTGATAAAAAATAGGGCGACCGATCACACGACGATGGAAGAGTGGTTTGTCAACTGCATCACACTATTCATCAATGATTTCACCATCAACTAC
ATGGTTGTTGGTGAAAATGTCATACCTAAATTGGACAACAACATATTGCCTGCCATGAAATTCCTTCTAGATCTTCTCAATAGTTGGTACCTTGGACAAGTGAAAATCAC
CACATTGTTTGGCTTATCTTCTTTAGGGAATATAAGTTTGATGCTTCTAGCTTATATCCCTGTGAAGCATATGCTAATTACATGGGAAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCCCTGTCAAATATTGTCGTCGATGCATATACAACATTCTTCTCGATGCATACTATTGCTTTGAAGGCAAACAACCTCCCACCACCATGGAAGGTGGTGCAACT
CTGTGAAAAATACAACAATCGTTGCATTCGGTTTGATGAACTAGATCTCAATATTATCAAAGAGTTTTTGTGGCACATACATCGAACTCTCCTTTACATCGAACTCTCCT
TTAGTGTACCAAATCAGTTGATAAAAAATAGGGCGACCGATCACACGACGATGGAAGAGTGGTTTGTCAACTGCATCACACTATTCATCAATGATTTCACCATCAACTAC
ATGGTTGTTGGTGAAAATGTCATACCTAAATTGGACAACAACATATTGCCTGCCATGAAATTCCTTCTAGATCTTCTCAATAGTTGGTACCTTGGACAAGTGAAAATCAC
CACATTGTTTGGCTTATCTTCTTTAGGGAATATAAGTTTGATGCTTCTAGCTTATATCCCTGTGAAGCATATGCTAATTACATGGGAAATATAA
Protein sequenceShow/hide protein sequence
MVALSNIVVDAYTTFFSMHTIALKANNLPPPWKVVQLCEKYNNRCIRFDELDLNIIKEFLWHIHRTLLYIELSFSVPNQLIKNRATDHTTMEEWFVNCITLFINDFTINY
MVVGENVIPKLDNNILPAMKFLLDLLNSWYLGQVKITTLFGLSSLGNISLMLLAYIPVKHMLITWEI