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CSPI01G28740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G28740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-box protein 1a
Genome locationChr1:23324971..23326754
RNA-Seq ExpressionCSPI01G28740
SyntenyCSPI01G28740
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016462 - pyrophosphatase activity (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144035.1 RING-box protein 1a [Cucumis sativus]3.8e-65100Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_008342455.1 RING-box protein 1a [Malus domestica]9.3e-6496.58Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPM+PAGE SSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_015889019.1 RING-box protein 1a [Ziziphus jujuba]7.1e-6497.44Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVP GEASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_022933228.1 RING-box protein 1a [Cucurbita moschata]1.1e-6499.15Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_038889977.1 RING-box protein 1a-like isoform X1 [Benincasa hispida]5.5e-6497.44Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPAG+ASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

TrEMBL top hitse value%identityAlignment
A0A0A0LWN9 RING-type domain-containing protein1.8e-65100Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A1S3BQE3 RING-box protein 1a1.8e-65100Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A5D3CFD3 RING-box protein 1a1.8e-65100Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A6J1F460 RING-box protein 1a5.3e-6599.15Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A6J1I027 RING-box protein 1a5.3e-6599.15Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

SwissProt top hitse value%identityAlignment
P62877 E3 ubiquitin-protein ligase RBX17.7e-5384.26Show/hide
Query:  MVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE
        M  A +  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN E
Subjt:  MVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE

Query:  WEFQKYGH
        WEFQKYGH
Subjt:  WEFQKYGH

P62878 E3 ubiquitin-protein ligase RBX17.7e-5384.26Show/hide
Query:  MVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE
        M  A +  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN E
Subjt:  MVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE

Query:  WEFQKYGH
        WEFQKYGH
Subjt:  WEFQKYGH

Q940X7 RING-box protein 1a1.2e-6192.37Show/hide
Query:  MATLDTDVPMVPAGEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLD+DV M+PAGEASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDTDVPMVPAGEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLDNSEWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

Q9M2B0 RING-box protein 1b2.0e-5383.9Show/hide
Query:  MATLDTDVPMVPAGEASSSAGP-SSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MA+L++DV M   GE+SS + P SSSK  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDTDVPMVPAGEASSSAGP-SSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLD  EWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

Q9W5E1 RING-box protein 1A2.2e-5292.86Show/hide
Query:  PSSSKK--PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
        PSSS K   KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EW+FQKYGH
Subjt:  PSSSKK--PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 113.5e-1639.56Show/hide
Query:  KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLDNSEWEFQK
        K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F++
Subjt:  KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLDNSEWEFQK

AT3G42830.1 RING/U-box superfamily protein1.4e-5483.9Show/hide
Query:  MATLDTDVPMVPAGEASSSAGP-SSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MA+L++DV M   GE+SS + P SSSK  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDTDVPMVPAGEASSSAGP-SSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLD  EWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

AT5G20570.1 RING-box 18.4e-6392.37Show/hide
Query:  MATLDTDVPMVPAGEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLD+DV M+PAGEASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDTDVPMVPAGEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLDNSEWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

AT5G20570.2 RING-box 19.6e-5976.76Show/hide
Query:  MATLDTDVPMVPAGEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------
        MATLD+DV M+PAGEASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW                  
Subjt:  MATLDTDVPMVPAGEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------

Query:  ------GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
              GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Subjt:  ------GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH

AT5G20570.3 RING-box 11.3e-5879.41Show/hide
Query:  MATLDTDVPMVPAGEASSS-AGPSSSKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        MATLD+DV M+PAGEASSS A  SS+KK KRFEIKKW+AVALWAW                   IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MATLDTDVPMVPAGEASSS-AGPSSSKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

Query:  GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
        GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Subjt:  GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTGGATACCGATGTCCCTATGGTTCCCGCCGGTGAAGCTTCAAGCAGTGCTGGCCCTTCGTCTTCCAAAAAACCTAAGCGATTTGAGATCAAGAAGTGGAA
CGCTGTCGCTCTCTGGGCTTGGGATATTGTTGTCGATAACTGTGCAATTTGTAGGAATCACATCATGGATCTTTGTATTGAATGTCAGGCGAATCAAGCGAGTGCTACCA
GTGAGGAATGCACTGTTGCCTGGGGGGTATGCAACCATGCTTTTCACTTCCACTGCATTAGTCGTTGGTTGAAGACTCGCCAAGTTTGTCCATTAGACAACAGCGAATGG
GAGTTCCAGAAGTATGGACATTAG
mRNA sequenceShow/hide mRNA sequence
TTTTGGGCCCAAGGCCCAAACCCCTTTGTAATTTATTCTTCTTTTGTTTCAATCTTTTTCCAACGCAAATTCTTCGAAATTCTTCCAAACTCCCCGGATTTCTTCTTCGC
CGCTCACCGGAGGACTGACTCTTTCCGATCGAGGTTTCATCCATGGCTACCTTGGATACCGATGTCCCTATGGTTCCCGCCGGTGAAGCTTCAAGCAGTGCTGGCCCTTC
GTCTTCCAAAAAACCTAAGCGATTTGAGATCAAGAAGTGGAACGCTGTCGCTCTCTGGGCTTGGGATATTGTTGTCGATAACTGTGCAATTTGTAGGAATCACATCATGG
ATCTTTGTATTGAATGTCAGGCGAATCAAGCGAGTGCTACCAGTGAGGAATGCACTGTTGCCTGGGGGGTATGCAACCATGCTTTTCACTTCCACTGCATTAGTCGTTGG
TTGAAGACTCGCCAAGTTTGTCCATTAGACAACAGCGAATGGGAGTTCCAGAAGTATGGACATTAGGACCTTCATATCGTCGCAGTTGCCGAACGGTCAGTCAGACAAAT
ACTACCCTAAAGTGTCTAGTTGTTGAAAACAAACTACTGTCCATTCCCAGATCCTGTTTGTGTTTTAAGATTGACTAGTTTATTTTACTATGTGAACCTTAGATGTTTCT
TTACAAATATTGATTTAAATGTTAATTTTTCCTTCTTTGAACATCCCTGCTTTTGTTTTCCGCTGTCTATGTTTTGGGTCGAACCGGAATGCCAATTCTCTTTGTTAATT
TTCGCCTTCATCTTTACTAAATATTTTGATCAAAGTTCTTTCTTCCTATGATTTTCTACTATGATTGTGTTTGAAATGGGG
Protein sequenceShow/hide protein sequence
MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEW
EFQKYGH