; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G28860 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G28860
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr1:23382403..23384889
RNA-Seq ExpressionCSPI01G28860
SyntenyCSPI01G28860
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10011.1 photosystem I chlorophyll a/b-binding protein 6 [Cucumis melo var. makuwa]8.6e-15097.69Show/hide
Query:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
        MALSISS  TALSSFPIR+S HR+NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
Subjt:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKK KADVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS

XP_004144043.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucumis sativus]2.3e-158100Show/hide
Query:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
        MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
Subjt:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG

XP_008450947.1 PREDICTED: photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucumis melo]3.8e-15397.38Show/hide
Query:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
        MALSISS  TALSSFPIR+S HR+NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
Subjt:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKK KADVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF+SGSG
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG

XP_022929243.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata]4.0e-13989.59Show/hide
Query:  MALSISSTATALSSFPIRD---SYHRS-NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLK
        MALSISS  TALS+ PIR+   S+HR+ NFPG FP + LRR  + L AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LK
Subjt:  MALSISSTATALSSFPIRD---SYHRS-NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLK

Query:  WFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFW
        WFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAG+REYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLKLPHKKK   DVGYPGGFW
Subjt:  WFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFW

Query:  FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG
        FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG
Subjt:  FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG

XP_022967968.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita maxima]3.1e-13989.93Show/hide
Query:  MALSISSTATALSSFPIRDSYHRS---NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKW
        MALSISS  TALSS PIR+S H     NFPG FP + LRR  S L AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKW
Subjt:  MALSISSTATALSSFPIRDSYHRS---NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKW

Query:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWF
        FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAG+REYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLKLPHKKK   DVGYPGGFWF
Subjt:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWF

Query:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG
        DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG
Subjt:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG

TrEMBL top hitse value%identityAlignment
A0A0A0LX05 Chlorophyll a-b binding protein, chloroplastic1.1e-158100Show/hide
Query:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
        MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
Subjt:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG

A0A1S3BQD6 Chlorophyll a-b binding protein, chloroplastic1.8e-15397.38Show/hide
Query:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
        MALSISS  TALSSFPIR+S HR+NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
Subjt:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKK KADVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF+SGSG
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG

A0A5A7UKU4 Chlorophyll a-b binding protein, chloroplastic1.8e-15397.38Show/hide
Query:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
        MALSISS  TALSSFPIR+S HR+NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
Subjt:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKK KADVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF+SGSG
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG

A0A5D3CDV1 Chlorophyll a-b binding protein, chloroplastic4.2e-15097.69Show/hide
Query:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
        MALSISS  TALSSFPIR+S HR+NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ
Subjt:  MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQ

Query:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM
        AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKK KADVGYPGGFWFDPM
Subjt:  AELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPM

Query:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS
        MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS
Subjt:  MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS

A0A6J1HWP6 Chlorophyll a-b binding protein, chloroplastic1.5e-13989.93Show/hide
Query:  MALSISSTATALSSFPIRDSYHRS---NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKW
        MALSISS  TALSS PIR+S H     NFPG FP + LRR  S L AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKW
Subjt:  MALSISSTATALSSFPIRDSYHRS---NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKW

Query:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWF
        FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAG+REYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLKLPHKKK   DVGYPGGFWF
Subjt:  FAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWF

Query:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG
        DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG
Subjt:  DPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic2.4e-8655.76Show/hide
Query:  MALSISSTATALSSFPIRDSYHRSNFPGN-----FPNHKLR-RDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPET
        MA + +S+  A  +F    S    +  G          +LR   YS    A+S  ++VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDPE+
Subjt:  MALSISSTATALSSFPIRDSYHRSNFPGN-----FPNHKLR-RDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPET

Query:  LKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGG
        L+W  QAEL+H RWAML  AGI +PE    +G++   SWY AG +EYF D TTL + +L L+GW EGRRWAD++ PG V+ D   P+ K    DVGYPGG
Subjt:  LKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGG

Query:  FWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFS
         WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  IF+AFS
Subjt:  FWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFS

P13869 Chlorophyll a-b binding protein, chloroplastic1.7e-8767.96Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMG
        PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE+LKW AQAEL+H+RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMG

Query:  WVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFSAFS
        IF+AFS
Subjt:  IFSAFS

P27521 Chlorophyll a-b binding protein 4, chloroplastic1.4e-5447.39Show/hide
Query:  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSW
        +L RD S      S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F  +G+I    W
Subjt:  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSW

Query:  YDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF
        YDAG  +YFA  +TL V +  L  +VE RRW D+ NPGSV+ D         K +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G   
Subjt:  YDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF

Query:  QAIYTGQGPLENLAAHVADPGHCNIFSAFS
        Q   TG+GP ENL  H++DP H  I   F+
Subjt:  QAIYTGQGPLENLAAHVADPGHCNIFSAFS

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic1.8e-11077.92Show/hide
Query:  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSW
        +L R+   +  A   VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+TLKWFAQAEL+H+RWAMLAV GI++PE  E LG I+NFSW
Subjt:  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSW

Query:  YDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF
        YDAGSREYFAD TTL VAQ+ LMGW EGRRWADL+ PGSVD++ K PHK   K DVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  F
Subjt:  YDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF

Query:  QAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        QA YT Q P+ENL AH+ADPGHCN+FSAF+S
Subjt:  QAIYTGQGPLENLAAHVADPGHCNIFSAFSS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic1.2e-8565.53Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP++LKW  QAE++H RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMG

Query:  WVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFSAFS
        IF+AF+
Subjt:  IFSAFS

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 61.3e-11177.92Show/hide
Query:  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSW
        +L R+   +  A   VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+TLKWFAQAEL+H+RWAMLAV GI++PE  E LG I+NFSW
Subjt:  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSW

Query:  YDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF
        YDAGSREYFAD TTL VAQ+ LMGW EGRRWADL+ PGSVD++ K PHK   K DVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  F
Subjt:  YDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF

Query:  QAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        QA YT Q P+ENL AH+ADPGHCN+FSAF+S
Subjt:  QAIYTGQGPLENLAAHVADPGHCNIFSAFSS

AT1G45474.1 photosystem I light harvesting complex gene 51.0e-4740.78Show/hide
Query:  RSNFPGNFPNHK------LRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGI
        R    G F +H+      + R  S +KAA  G++     +  +R  W PG +PP +LDG+L GD+GFDPLGLG DPE+LKW+ QAEL+H+R+AML VAGI
Subjt:  RSNFPGNFPNHK------LRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGI

Query:  LLPEWFESLGLIQNFSWYDAGSREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAK---ADVGYPGGFWFDPMMWGRGSPEPVMV
        L  +   + G+     WY+AG+ ++ FA   TL+V Q  LMG+ E +R+ D V+PGS   +       +A     + GYPGG   +P+   +   +    
Subjt:  LLPEWFESLGLIQNFSWYDAGSREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAK---ADVGYPGGFWFDPMMWGRGSPEPVMV

Query:  LRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIF-SAFSSGS
         + KEIKNGRLAM+A +G + QA  T  GP++NL  H+++P H  I  + F+S S
Subjt:  LRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIF-SAFSSGS

AT1G45474.2 photosystem I light harvesting complex gene 51.0e-4740.78Show/hide
Query:  RSNFPGNFPNHK------LRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGI
        R    G F +H+      + R  S +KAA  G++     +  +R  W PG +PP +LDG+L GD+GFDPLGLG DPE+LKW+ QAEL+H+R+AML VAGI
Subjt:  RSNFPGNFPNHK------LRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGI

Query:  LLPEWFESLGLIQNFSWYDAGSREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAK---ADVGYPGGFWFDPMMWGRGSPEPVMV
        L  +   + G+     WY+AG+ ++ FA   TL+V Q  LMG+ E +R+ D V+PGS   +       +A     + GYPGG   +P+   +   +    
Subjt:  LLPEWFESLGLIQNFSWYDAGSREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAK---ADVGYPGGFWFDPMMWGRGSPEPVMV

Query:  LRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIF-SAFSSGS
         + KEIKNGRLAM+A +G + QA  T  GP++NL  H+++P H  I  + F+S S
Subjt:  LRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIF-SAFSSGS

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.0e-5547.39Show/hide
Query:  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSW
        +L RD S      S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F  +G+I    W
Subjt:  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSW

Query:  YDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF
        YDAG  +YFA  +TL V +  L  +VE RRW D+ NPGSV+ D         K +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G   
Subjt:  YDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF

Query:  QAIYTGQGPLENLAAHVADPGHCNIFSAFS
        Q   TG+GP ENL  H++DP H  I   F+
Subjt:  QAIYTGQGPLENLAAHVADPGHCNIFSAFS

AT3G61470.1 photosystem I light harvesting complex gene 28.5e-8765.53Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP++LKW  QAE++H RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMG

Query:  WVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFSAFS
        IF+AF+
Subjt:  IFSAFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCTCCATTTCTTCCACTGCCACTGCGCTCTCCTCCTTCCCAATCAGAGACTCCTATCACAGATCAAATTTTCCGGGAAATTTCCCAAATCATAAGCTCCGTCG
AGATTACTCCGATTTGAAAGCGGCGAAATCCGGCGTGTCTAGCGTCTGTGAACCGCTCCCTCCTGATAGACCCCTTTGGTTTCCCGGCAGCAGCCCGCCGGAGTGGCTCG
ACGGCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTTCGGATCCAGAGACACTAAAATGGTTCGCACAAGCAGAACTAATGCACGCAAGATGGGCAATG
CTAGCCGTAGCAGGAATCCTTCTACCGGAATGGTTCGAGAGCTTAGGACTCATACAAAACTTCTCATGGTACGACGCTGGATCTCGAGAATATTTCGCAGATCCGACGAC
ATTGCTGGTGGCGCAGTTGGCGTTGATGGGGTGGGTGGAGGGGAGGCGATGGGCAGACTTGGTGAACCCGGGGAGCGTGGACGTTGACTTGAAGCTGCCCCACAAAAAGA
AAGCAAAGGCAGATGTGGGCTACCCGGGGGGGTTCTGGTTTGACCCGATGATGTGGGGCAGGGGGTCGCCGGAGCCGGTGATGGTGCTGAGGACTAAAGAGATTAAGAAT
GGGCGGTTAGCTATGTTGGCCTTTGTTGGGCTGTGGTTTCAAGCTATTTATACTGGCCAAGGACCCCTTGAGAATCTCGCTGCACACGTGGCAGACCCCGGCCATTGCAA
TATCTTTTCGGCATTTAGTTCTGGTTCGGGTTGA
mRNA sequenceShow/hide mRNA sequence
CAAGATTATAACGTAGCAGTGACTTAATTAAAAATTTTGAATAGTAACATCATCTTAAGTTTTTGTACAACATCATTCTAAAAGATTTCTAAAAGAAAAAAATATATGAT
GATCCTGATGGATGAGTTAGAAATGAAGGTTTAAAATCTGTATATCCACAAGCATCCATCACAGGCCATCCATTCCCCCAAATATACATTCTATAACCCCACCAATCCTC
TTTTACCCTTTTGGAGTCTCTCCGGCGCCCATGGCTCTCTCCATTTCTTCCACTGCCACTGCGCTCTCCTCCTTCCCAATCAGAGACTCCTATCACAGATCAAATTTTCC
GGGAAATTTCCCAAATCATAAGCTCCGTCGAGATTACTCCGATTTGAAAGCGGCGAAATCCGGCGTGTCTAGCGTCTGTGAACCGCTCCCTCCTGATAGACCCCTTTGGT
TTCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTTCGGATCCAGAGACACTAAAATGGTTCGCACAA
GCAGAACTAATGCACGCAAGATGGGCAATGCTAGCCGTAGCAGGAATCCTTCTACCGGAATGGTTCGAGAGCTTAGGACTCATACAAAACTTCTCATGGTACGACGCTGG
ATCTCGAGAATATTTCGCAGATCCGACGACATTGCTGGTGGCGCAGTTGGCGTTGATGGGGTGGGTGGAGGGGAGGCGATGGGCAGACTTGGTGAACCCGGGGAGCGTGG
ACGTTGACTTGAAGCTGCCCCACAAAAAGAAAGCAAAGGCAGATGTGGGCTACCCGGGGGGGTTCTGGTTTGACCCGATGATGTGGGGCAGGGGGTCGCCGGAGCCGGTG
ATGGTGCTGAGGACTAAAGAGATTAAGAATGGGCGGTTAGCTATGTTGGCCTTTGTTGGGCTGTGGTTTCAAGCTATTTATACTGGCCAAGGACCCCTTGAGAATCTCGC
TGCACACGTGGCAGACCCCGGCCATTGCAATATCTTTTCGGCATTTAGTTCTGGTTCGGGTTGAAATTGAATCCTTCATTTTGGTTTACTTGAGATGGTGAAGTGTGTAC
ATAAAAAGCAAAGAGATGAGAAGATTTGCGACGGTTTACTATATAATTGTCTACGTATTATTCAAACTCTTTAATGCTGGACTCCTCCTCACTGGTCAATATTAATTTCA
AAATTATCTTAAATTATTGAATCTTA
Protein sequenceShow/hide protein sequence
MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAM
LAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKN
GRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG