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CSPI01G29780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G29780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA (Cytosine-5)-methyltransferase CMT3-like
Genome locationChr1:24251764..24252200
RNA-Seq ExpressionCSPI01G29780
SyntenyCSPI01G29780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653489.1 hypothetical protein Csa_006929, partial [Cucumis sativus]2.9e-38100Show/hide
Query:  MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVG
        MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVG
Subjt:  MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVG

KAG6588160.1 hypothetical protein SDJN03_16725, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3579.09Show/hide
Query:  SLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGG-------YNNNHSAVGFPWGVGFLLLLLLFPWSVAILL
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG       Y++N +AVGFPWGVGFLLLLLLFPWS AILL
Subjt:  SLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGG-------YNNNHSAVGFPWGVGFLLLLLLFPWSVAILL

Query:  LLLYFFFLTN
        L+LYFFFLTN
Subjt:  LLLYFFFLTN

XP_011660097.1 uncharacterized protein LOC105436341 [Cucumis sativus]1.1e-50100Show/hide
Query:  MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL
        MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL
Subjt:  MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL

Query:  LLLLYFFFLTN
        LLLLYFFFLTN
Subjt:  LLLLYFFFLTN

XP_015957774.2 uncharacterized protein LOC107481931 [Arachis duranensis]2.6e-1551.04Show/hide
Query:  RNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGY-------NNNHSAVGFPWGVGFLLLLLLF
        R+SS  SFS+ WL+   + +I GFL Y VYDA +A+ASE+ QRL+V+SPLLL++ VHWLS G    +          H A G PWGV F+LLLL F
Subjt:  RNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGY-------NNNHSAVGFPWGVGFLLLLLLF

XP_022157357.1 uncharacterized protein LOC111024080 [Momordica charantia]1.5e-3176.77Show/hide
Query:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAILLLLLYFFFLTN
        S+QWLLAT+ALI FGFLAYA+YDAAVAS +E+FQR+VVVSPLLLVVAVHWLS+G         +AVGFPWGVG LLLL+LFPWS A+LLLLLYFFFLTN
Subjt:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAILLLLLYFFFLTN

TrEMBL top hitse value%identityAlignment
A0A0A0M2K2 Uncharacterized protein5.4e-51100Show/hide
Query:  MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL
        MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL
Subjt:  MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL

Query:  LLLLYFFFLTN
        LLLLYFFFLTN
Subjt:  LLLLYFFFLTN

A0A444ZSA4 Uncharacterized protein1.3e-1551.04Show/hide
Query:  RNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGY-------NNNHSAVGFPWGVGFLLLLLLF
        R+SS  SFS+ WL+   + +I GFL Y VYDA +A+ASE+ QRL+V+SPLLL++ VHWLS G    +          H A G PWGV F+LLLL F
Subjt:  RNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGY-------NNNHSAVGFPWGVGFLLLLLLF

A0A5A7TFN5 DNA (Cytosine-5)-methyltransferase CMT3-like5.4e-51100Show/hide
Query:  MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL
        MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL
Subjt:  MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAIL

Query:  LLLLYFFFLTN
        LLLLYFFFLTN
Subjt:  LLLLYFFFLTN

A0A6J1DUA1 uncharacterized protein LOC1110240807.4e-3276.77Show/hide
Query:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAILLLLLYFFFLTN
        S+QWLLAT+ALI FGFLAYA+YDAAVAS +E+FQR+VVVSPLLLVVAVHWLS+G         +AVGFPWGVG LLLL+LFPWS A+LLLLLYFFFLTN
Subjt:  SDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAILLLLLYFFFLTN

A0A6P4D1L0 uncharacterized protein LOC1074819311.3e-1551.04Show/hide
Query:  RNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGY-------NNNHSAVGFPWGVGFLLLLLLF
        R+SS  SFS+ WL+   + +I GFL Y VYDA +A+ASE+ QRL+V+SPLLL++ VHWLS G    +          H A G PWGV F+LLLL F
Subjt:  RNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGY-------NNNHSAVGFPWGVGFLLLLLLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTGTAGAAACTCTTCAAGCTTGAGCTTTTCAGACCAATGGCTTCTTGCAACCATTGCTCTTATAATCTTTGGATTCTTGGCTTATGCCGTGTACGATGCCGC
CGTTGCCTCGGCATCAGAGGTATTTCAGAGGCTGGTCGTTGTTTCGCCGTTGCTTTTGGTTGTTGCCGTTCACTGGCTATCTCTCGGCCGGGACGGAGGATATAACAACA
ACCATTCAGCTGTGGGATTCCCATGGGGAGTTGGGTTTCTTCTGCTTTTGCTTCTGTTTCCTTGGAGTGTTGCCATTTTGTTGCTTCTACTTTATTTCTTCTTTCTTACT
AATTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCACTTCTTTTTAACTACAAATCATTTCCCACTCCTAAACACAAACACCAAAACAACAACACCCTTTTCACTTTTTTTCTCCCCCTCTCTCTATTCTTATGGCTACT
TGTAGAAACTCTTCAAGCTTGAGCTTTTCAGACCAATGGCTTCTTGCAACCATTGCTCTTATAATCTTTGGATTCTTGGCTTATGCCGTGTACGATGCCGCCGTTGCCTC
GGCATCAGAGGTATTTCAGAGGCTGGTCGTTGTTTCGCCGTTGCTTTTGGTTGTTGCCGTTCACTGGCTATCTCTCGGCCGGGACGGAGGATATAACAACAACCATTCAG
CTGTGGGATTCCCATGGGGAGTTGGGTTTCTTCTGCTTTTGCTTCTGTTTCCTTGGAGTGTTGCCATTTTGTTGCTTCTACTTTATTTCTTCTTTCTTACTAATTGA
Protein sequenceShow/hide protein sequence
MATCRNSSSLSFSDQWLLATIALIIFGFLAYAVYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGRDGGYNNNHSAVGFPWGVGFLLLLLLFPWSVAILLLLLYFFFLT
N