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CSPI01G29850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G29850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr1:24390330..24390764
RNA-Seq ExpressionCSPI01G29850
SyntenyCSPI01G29850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045543.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.0e-0539.13Show/hide
Query:  PGSEEANIVICYSIQPHHQCISM-------RYVSICCLKWVDVRLKYIEVVKAGL-----------------RKFSNPEQARANPPNNLVNR
        PG+E+        I PH  C S        +  S+CCLKWV+V  +YIEVVK  L                 +K+S+PE+ARANPP+ LV R
Subjt:  PGSEEANIVICYSIQPHHQCISM-------RYVSICCLKWVDVRLKYIEVVKAGL-----------------RKFSNPEQARANPPNNLVNR

KAA0056817.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.4e-0463.41Show/hide
Query:  ICCLKWVDVRLKYIEVVKA---GLRKFSNPEQARANPPNNL
        +CCLKWVDV  +YIEVVK     L+K  +PE+ARANPPN L
Subjt:  ICCLKWVDVRLKYIEVVKA---GLRKFSNPEQARANPPNNL

KAA0059573.1 hypothetical protein E6C27_scaffold4837G00010 [Cucumis melo var. makuwa]1.3e-0656.86Show/hide
Query:  YRPGSEEANIVICYSIQPHHQCISMRYVSICCLKWVDVRLKYIEVVKAGLR
        +RP SEEAN+V C S+Q +H CI+M   S+ CLKWVDV  +YI+VVK  L+
Subjt:  YRPGSEEANIVICYSIQPHHQCISMRYVSICCLKWVDVRLKYIEVVKAGLR

KAA0063382.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.3e-0539.78Show/hide
Query:  PGSEEANIVICYSIQPHHQCISMRYVSIC--------CLKWVDVRLKYIEVVKAGL-----------------RKFSNPEQARANPPNNLVNR
        PG+E+        I PH  C S + + +C        CLKW DVR +YIEVVK  L                 +K+S+PE+ARANPPN LV R
Subjt:  PGSEEANIVICYSIQPHHQCISMRYVSIC--------CLKWVDVRLKYIEVVKAGL-----------------RKFSNPEQARANPPNNLVNR

TrEMBL top hitse value%identityAlignment
A0A5A7UQB1 CACTA en-spm transposon protein1.7e-0463.41Show/hide
Query:  ICCLKWVDVRLKYIEVVKA---GLRKFSNPEQARANPPNNL
        +CCLKWVDV  +YIEVVK     L+K  +PE+ARANPPN L
Subjt:  ICCLKWVDVRLKYIEVVKA---GLRKFSNPEQARANPPNNL

A0A5A7UUJ5 Uncharacterized protein6.1e-0756.86Show/hide
Query:  YRPGSEEANIVICYSIQPHHQCISMRYVSICCLKWVDVRLKYIEVVKAGLR
        +RP SEEAN+V C S+Q +H CI+M   S+ CLKWVDV  +YI+VVK  L+
Subjt:  YRPGSEEANIVICYSIQPHHQCISMRYVSICCLKWVDVRLKYIEVVKAGLR

A0A5A7V548 CACTA en-spm transposon protein2.5e-0539.78Show/hide
Query:  PGSEEANIVICYSIQPHHQCISMRYVSIC--------CLKWVDVRLKYIEVVKAGL-----------------RKFSNPEQARANPPNNLVNR
        PG+E+        I PH  C S + + +C        CLKW DVR +YIEVVK  L                 +K+S+PE+ARANPPN LV R
Subjt:  PGSEEANIVICYSIQPHHQCISMRYVSIC--------CLKWVDVRLKYIEVVKAGL-----------------RKFSNPEQARANPPNNLVNR

A0A5D3D886 CACTA en-spm transposon protein6.3e-0442.68Show/hide
Query:  PGSEEANIVICYSIQPHHQCISM---RYVSICCLKWVDVRLKYIEVVKAGL--------------RKFSNPEQARANPPNNL
        PG+E+   +  Y+I P  Q I +   +  SI CLKW D+  +YIEVVKA L              +K+S+PE+ARANPPN L
Subjt:  PGSEEANIVICYSIQPHHQCISM---RYVSICCLKWVDVRLKYIEVVKAGL--------------RKFSNPEQARANPPNNL

A0A5D3DZL6 CACTA en-spm transposon protein2.0e-0539.13Show/hide
Query:  PGSEEANIVICYSIQPHHQCISM-------RYVSICCLKWVDVRLKYIEVVKAGL-----------------RKFSNPEQARANPPNNLVNR
        PG+E+        I PH  C S        +  S+CCLKWV+V  +YIEVVK  L                 +K+S+PE+ARANPP+ LV R
Subjt:  PGSEEANIVICYSIQPHHQCISM-------RYVSICCLKWVDVRLKYIEVVKAGL-----------------RKFSNPEQARANPPNNLVNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGATCTCAATCTCCATATCGTCCTGGAAGCGAAGAAGCTAATATCGTCATATGTTATTCGATTCAGCCACACCATCAGTGTATTAGCATGAGATACGTTTCCAT
TTGCTGCCTTAAGTGGGTTGATGTTCGTCTGAAGTACATCGAGGTTGTCAAGGCTGGCCTACGAAAGTTCAGCAACCCTGAACAAGCACGTGCCAACCCACCGAACAATT
TGGTGAATCGTTTGGCACTTCCTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGATCTCAATCTCCATATCGTCCTGGAAGCGAAGAAGCTAATATCGTCATATGTTATTCGATTCAGCCACACCATCAGTGTATTAGCATGAGATACGTTTCCAT
TTGCTGCCTTAAGTGGGTTGATGTTCGTCTGAAGTACATCGAGGTTGTCAAGGCTGGCCTACGAAAGTTCAGCAACCCTGAACAAGCACGTGCCAACCCACCGAACAATT
TGGTGAATCGTTTGGCACTTCCTCTATGA
Protein sequenceShow/hide protein sequence
MERSQSPYRPGSEEANIVICYSIQPHHQCISMRYVSICCLKWVDVRLKYIEVVKAGLRKFSNPEQARANPPNNLVNRLALPL