; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G30140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G30140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr1:24652007..24652813
RNA-Seq ExpressionCSPI01G30140
SyntenyCSPI01G30140
Gene Ontology termsGO:1900865 - chloroplast RNA modification (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139110.1 pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus]4.5e-11799.53Show/hide
Query:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP
        MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIR+ERLVP
Subjt:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISGCLQV
        SWTTMISGCLQV
Subjt:  SWTTMISGCLQV

XP_008450449.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis melo]1.2e-11295.28Show/hide
Query:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP
        MVRCDFLL SCKSFRQIKQVHA+LIT+GLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIR+ERLVP
Subjt:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        NQYSFAFAFK CGSGVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVVDARKVF+WSP RDMYSWNIMLSGYARLGKMDEARQLFDEMPE+DVV
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISGCLQV
        SWTTMISGCLQV
Subjt:  SWTTMISGCLQV

XP_022967088.1 pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima]1.7e-9283.17Show/hide
Query:  FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS
        FLL  CKS  QIKQ HA+LITTGL+LHPI TNKLLK LS S F  ISYA MVFDHFPQPDLFLYNTIIK  A S TSSADSFT+FRSLIRD  LVPNQYS
Subjt:  FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS

Query:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT
        FAFAFKGCG+ VGVLEGEQVRVHA+KLGLENNLFV NALIGMYVNL FV DARKVFDWS  RDMYSWNIMLSGYA+LGKMD+AR+LFDEMPE+DVVSWTT
Subjt:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT

Query:  MISGCLQV
        MI+GC+QV
Subjt:  MISGCLQV

XP_023529533.1 pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp. pepo]1.3e-9283.65Show/hide
Query:  FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS
        FLL  CKS  QIKQ HA+LITTGL+LHPI TNKLLK LS S FA ISYA MVFDHFPQPDLFLYNTIIK  A S TSSADSFT+FRSLIRD RLVPNQYS
Subjt:  FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS

Query:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT
        FAFAFKGCG+ VGVLEGEQVRVHA+KLGLENNLFV NALIGMYVNL FV  ARKVFDWS  RDMYSWNIMLSGYA+LGKMD+AR+LFDEMPE+DVVSWTT
Subjt:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT

Query:  MISGCLQV
        MI+GC+QV
Subjt:  MISGCLQV

XP_038878435.1 pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida]4.4e-10487.67Show/hide
Query:  MVRCD------FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSI-FAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI
        M+RCD      FLL SCKS  QIKQVHA+LITTGLI+HPIPTNKLLK +SS  FAPISYAHMVFDH PQPDLFLYNTIIK LA STTSSADSFT+FRSLI
Subjt:  MVRCD------FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSI-FAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLI

Query:  RDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE
        R+ERLVPNQYSFAF FKGCG+GVGVLEGEQVRVHA+KLGLENNLFV NALIGMYVNL FVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE
Subjt:  RDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE

Query:  MPEKDVVSWTTMISGCLQV
        MPE+DVVSWTTMISGCLQV
Subjt:  MPEKDVVSWTTMISGCLQV

TrEMBL top hitse value%identityAlignment
A0A0A0LX83 DYW_deaminase domain-containing protein2.2e-11799.53Show/hide
Query:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP
        MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIR+ERLVP
Subjt:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISGCLQV
        SWTTMISGCLQV
Subjt:  SWTTMISGCLQV

A0A1S3BNM1 pentatricopeptide repeat-containing protein At5g66520-like5.6e-11395.28Show/hide
Query:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP
        MVRCDFLL SCKSFRQIKQVHA+LIT+GLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIR+ERLVP
Subjt:  MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        NQYSFAFAFK CGSGVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVVDARKVF+WSP RDMYSWNIMLSGYARLGKMDEARQLFDEMPE+DVV
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISGCLQV
        SWTTMISGCLQV
Subjt:  SWTTMISGCLQV

A0A5A7UA76 Pentatricopeptide repeat-containing protein2.3e-8295.57Show/hide
Query:  MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVV
        MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIR+ERLVPNQYSFAFAFK CGSGVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVV
Subjt:  MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVV

Query:  DARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQV
        DARKVF+WSP RDMYSWNIMLSGYARLGKMDEARQLFDEMPE+DVVSWTTMISGCLQV
Subjt:  DARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQV

A0A6J1EIF4 pentatricopeptide repeat-containing protein At3g62890-like1.1e-9283.17Show/hide
Query:  FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS
        FLL  CKS  QIKQ HA+LITTGL+LHPI TNKLLK LS S FA ISYA MVFDHFPQPDLFLYNTIIK  A S TSSADSFT+FRSLIRD RLVPNQYS
Subjt:  FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS

Query:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT
        FAFAFKGCG+ VGVLEGEQVR HA+KLGLENNLFV NALIGMYVNL  V DARKVFDWS  RDMYSWNIMLSGYA+LGKMD+AR+LFDEMPE+DVVSWTT
Subjt:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT

Query:  MISGCLQV
        MI+GC+QV
Subjt:  MISGCLQV

A0A6J1HU41 pentatricopeptide repeat-containing protein At5g66520-like8.4e-9383.17Show/hide
Query:  FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS
        FLL  CKS  QIKQ HA+LITTGL+LHPI TNKLLK LS S F  ISYA MVFDHFPQPDLFLYNTIIK  A S TSSADSFT+FRSLIRD  LVPNQYS
Subjt:  FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS

Query:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT
        FAFAFKGCG+ VGVLEGEQVRVHA+KLGLENNLFV NALIGMYVNL FV DARKVFDWS  RDMYSWNIMLSGYA+LGKMD+AR+LFDEMPE+DVVSWTT
Subjt:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT

Query:  MISGCLQV
        MI+GC+QV
Subjt:  MISGCLQV

SwissProt top hitse value%identityAlignment
O49399 Pentatricopeptide repeat-containing protein At4g188404.7e-3239.2Show/hide
Query:  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAF
        KS  +I+Q HA ++ TGL       +KL+   ++   P  +SYAH + +    P+ F +N++I+  A S+T    + T FR ++    + P++YSF F  
Subjt:  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAF

Query:  KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISG
        K C +  G  EG Q+    IK GL  ++FV N L+ +Y    +   ARKV D  P RD  SWN +LS Y   G +DEAR LFDEM E++V SW  MISG
Subjt:  KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISG

Q9FG16 Pentatricopeptide repeat-containing protein At5g065402.2e-2932.69Show/hide
Query:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP
        LL SC SF  +K +H  L+ T LI      ++LL      S+   P   + YA+ +F     P+LF++N +I+   FST +       F + +   R+ P
Subjt:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        +  +F F  K       VL GEQ     ++ G +N+++V N+L+ MY N  F+  A ++F     RD+ SW  M++GY + G ++ AR++FDEMP +++ 
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISG
        +W+ MI+G
Subjt:  SWTTMISG

Q9FJY7 Pentatricopeptide repeat-containing protein At5g665201.7e-2937.09Show/hide
Query:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLV----
        L  C    ++KQ+HAR++ TGL+       K L       SS F P  YA +VFD F +PD FL+N +I+   FS +   +     RSL+  +R++    
Subjt:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLV----

Query:  -PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKD
          N Y+F    K C +     E  Q+     KLG EN+++  N+LI  Y        A  +FD  P  D  SWN ++ GY + GKMD A  LF +M EK+
Subjt:  -PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKD

Query:  VVSWTTMISGCLQ
         +SWTTMISG +Q
Subjt:  VVSWTTMISGCLQ

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic6.5e-3439.22Show/hide
Query:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS
        LL +CK+ + ++ +HA++I  GL       +KL++   LS  F  + YA  VF    +P+L ++NT+ +  A S  S   S  K    +    L+PN Y+
Subjt:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS

Query:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT
        F F  K C       EG+Q+  H +KLG + +L+V  +LI MYV    + DA KVFD SP+RD+ S+  ++ GYA  G ++ A++LFDE+P KDVVSW  
Subjt:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT

Query:  MISG
        MISG
Subjt:  MISG

Q9SIL5 Pentatricopeptide repeat-containing protein At2g205401.8e-3138.31Show/hide
Query:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAF
        L   KS  + K+++A +I  GL        K++     I   + YA  +F+    P++FLYN+II+    ++    D    ++ L+R    +P++++F F
Subjt:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAF

Query:  AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS
         FK C S      G+QV  H  K G   ++   NALI MY+  D +VDA KVFD    RD+ SWN +LSGYARLG+M +A+ LF  M +K +VSWT MIS
Subjt:  AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS

Query:  G
        G
Subjt:  G

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.6e-3539.22Show/hide
Query:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS
        LL +CK+ + ++ +HA++I  GL       +KL++   LS  F  + YA  VF    +P+L ++NT+ +  A S  S   S  K    +    L+PN Y+
Subjt:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYS

Query:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT
        F F  K C       EG+Q+  H +KLG + +L+V  +LI MYV    + DA KVFD SP+RD+ S+  ++ GYA  G ++ A++LFDE+P KDVVSW  
Subjt:  FAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT

Query:  MISG
        MISG
Subjt:  MISG

AT2G20540.1 mitochondrial editing factor 211.3e-3238.31Show/hide
Query:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAF
        L   KS  + K+++A +I  GL        K++     I   + YA  +F+    P++FLYN+II+    ++    D    ++ L+R    +P++++F F
Subjt:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAF

Query:  AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS
         FK C S      G+QV  H  K G   ++   NALI MY+  D +VDA KVFD    RD+ SWN +LSGYARLG+M +A+ LF  M +K +VSWT MIS
Subjt:  AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS

Query:  G
        G
Subjt:  G

AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.3e-3339.2Show/hide
Query:  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAF
        KS  +I+Q HA ++ TGL       +KL+   ++   P  +SYAH + +    P+ F +N++I+  A S+T    + T FR ++    + P++YSF F  
Subjt:  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAF

Query:  KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISG
        K C +  G  EG Q+    IK GL  ++FV N L+ +Y    +   ARKV D  P RD  SWN +LS Y   G +DEAR LFDEM E++V SW  MISG
Subjt:  KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISG

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-3032.69Show/hide
Query:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP
        LL SC SF  +K +H  L+ T LI      ++LL      S+   P   + YA+ +F     P+LF++N +I+   FST +       F + +   R+ P
Subjt:  LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVP

Query:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV
        +  +F F  K       VL GEQ     ++ G +N+++V N+L+ MY N  F+  A ++F     RD+ SW  M++GY + G ++ AR++FDEMP +++ 
Subjt:  NQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVV

Query:  SWTTMISG
        +W+ MI+G
Subjt:  SWTTMISG

AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-3037.09Show/hide
Query:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLV----
        L  C    ++KQ+HAR++ TGL+       K L       SS F P  YA +VFD F +PD FL+N +I+   FS +   +     RSL+  +R++    
Subjt:  LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLV----

Query:  -PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKD
          N Y+F    K C +     E  Q+     KLG EN+++  N+LI  Y        A  +FD  P  D  SWN ++ GY + GKMD A  LF +M EK+
Subjt:  -PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKD

Query:  VVSWTTMISGCLQ
         +SWTTMISG +Q
Subjt:  VVSWTTMISGCLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGATGCGACTTTTTACTCAGTTCCTGCAAATCATTTCGCCAAATCAAACAAGTTCACGCCCGATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACTAA
TAAACTCCTTAAACAACTTTCCTCAATATTCGCTCCAATTTCCTATGCCCACATGGTGTTCGACCATTTTCCTCAACCAGATCTCTTCCTCTACAACACCATTATCAAGG
TCCTGGCATTTTCAACCACTTCTTCTGCTGATTCTTTCACCAAGTTTCGTTCTTTAATCCGCGACGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTTGCCTTCAAG
GGCTGTGGCAGTGGTGTTGGGGTTCTGGAAGGGGAGCAAGTTCGTGTTCATGCTATTAAACTTGGTCTGGAAAACAATCTGTTTGTGACGAATGCGTTGATTGGGATGTA
TGTGAATTTGGATTTTGTTGTGGATGCTAGAAAGGTGTTTGATTGGAGTCCCAATAGAGATATGTATTCCTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAAAA
TGGATGAAGCTCGGCAACTGTTTGATGAAATGCCTGAAAAAGATGTTGTGTCGTGGACAACAATGATTTCTGGTTGTCTTCAGGTAATTACATGA
mRNA sequenceShow/hide mRNA sequence
GTGATCTCTAAGCTATAGTAAGTCTGTTTCCATATACAAAATTATCAGGCACATGGCCGCCGTCAAGGTGTGGCCGGATTGATCGATATGTATGCAAAATGCATGGCGGC
TCTCAATGTGATATTCTTCAAGCTTCTTCACTAAGTCACTGTCTTCAGAAAAATGGTACGATGCGACTTTTTACTCAGTTCCTGCAAATCATTTCGCCAAATCAAACAAG
TTCACGCCCGATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACTAATAAACTCCTTAAACAACTTTCCTCAATATTCGCTCCAATTTCCTATGCCCACATGGTG
TTCGACCATTTTCCTCAACCAGATCTCTTCCTCTACAACACCATTATCAAGGTCCTGGCATTTTCAACCACTTCTTCTGCTGATTCTTTCACCAAGTTTCGTTCTTTAAT
CCGCGACGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTTGCCTTCAAGGGCTGTGGCAGTGGTGTTGGGGTTCTGGAAGGGGAGCAAGTTCGTGTTCATGCTATTA
AACTTGGTCTGGAAAACAATCTGTTTGTGACGAATGCGTTGATTGGGATGTATGTGAATTTGGATTTTGTTGTGGATGCTAGAAAGGTGTTTGATTGGAGTCCCAATAGA
GATATGTATTCCTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAAAATGGATGAAGCTCGGCAACTGTTTGATGAAATGCCTGAAAAAGATGTTGTGTCGTGGAC
AACAATGATTTCTGGTTGTCTTCAGGTAATTACATGA
Protein sequenceShow/hide protein sequence
MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFK
GCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVIT