; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G30350 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G30350
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationChr1:24817838..24823138
RNA-Seq ExpressionCSPI01G30350
SyntenyCSPI01G30350
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]1.4e-14499.63Show/hide
Query:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
        MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
Subjt:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM

Query:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNES YRLNDGSEQQNGSSLTNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]1.3e-14097.03Show/hide
Query:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM

Query:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]1.3e-14097.03Show/hide
Query:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM

Query:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]4.2e-12889.3Show/hide
Query:  MQSKSETNNQLDS--NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQ
        MQSKSETNNQL+S  NGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR D Q
Subjt:  MQSKSETNNQLDS--NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQ

Query:  KMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSTLPAMHGEC  QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK EA   E HSDK NESGY LNDGSEQ+NGSS  NKAS+
Subjt:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]1.7e-13795.54Show/hide
Query:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKM
Subjt:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM

Query:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKK+E +GK    DKVNESGYRLN+GSEQQNGSSLTN+ASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit7.0e-14599.63Show/hide
Query:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
        MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
Subjt:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM

Query:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNES YRLNDGSEQQNGSSLTNKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

A0A1S3BP85 Nuclear transcription factor Y subunit6.1e-14197.03Show/hide
Query:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM

Query:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit6.1e-14197.03Show/hide
Query:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM

Query:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit6.1e-14197.03Show/hide
Query:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM
        MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KM
Subjt:  MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKM

Query:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
        QHVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK
Subjt:  QHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKK

Query:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKHSDKV+ESGYRLNDGSEQQ GSSL NKASE
Subjt:  SIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

A0A6J1DK42 Nuclear transcription factor Y subunit2.0e-12889.3Show/hide
Query:  MQSKSETNNQLDS--NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQ
        MQSKSETNNQL+S  NGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR D Q
Subjt:  MQSKSETNNQLDS--NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQ

Query:  KMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSTLPAMHGEC  QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK EA   E HSDK NESGY LNDGSEQ+NGSS  NKAS+
Subjt:  KKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-75.5e-2242.31Show/hide
Query:  GSYRQDPQKMQHVSSTLP-AMHGECLAQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGI
        GS+ +  Q+  H    +P A + E +  S      G  +S+A    PY DPYY  + A       G    ++G     +PLP +  ++PVFVNAKQY GI
Subjt:  GSYRQDPQKMQHVSSTLP-AMHGECLAQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF--AKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTN
        LRRRQ+RA+ E++ K IK+RKPYLHESRH HAIRR R  GGRF  AKK +    E H D  +E    L+ G      SS T+
Subjt:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF--AKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTN

Q8VY64 Nuclear transcription factor Y subunit A-41.2e-2150.41Show/hide
Query:  PYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF
        PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVFVNAKQY GILRRRQ+RAK EA  ++IKA+KPY+HESRH HAIRR R  GGRF
Subjt:  PYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF

Query:  --AKKSEAEGKEKHSDKVNES
          AKK   + KE+     +E+
Subjt:  --AKKSEAEGKEKHSDKVNES

Q93ZH2 Nuclear transcription factor Y subunit A-34.1e-1733.21Show/hide
Query:  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQ-------STQLE
        + +   P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++  +   D    + +S    A  G  + Q         Q  
Subjt:  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQ-------STQLE

Query:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHE
        + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ K I+ARKPYLHE
Subjt:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHE

Query:  SRHQHAIRRSRSSGGRF-------AKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNK
        SRH HA++R R SGGRF        +  +A  +E+  DK+ +   R  + S  +      NK
Subjt:  SRHQHAIRRSRSSGGRF-------AKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNK

Q945M9 Nuclear transcription factor Y subunit A-91.1e-4648.94Show/hide
Query:  MQSKSET-NNQLDS--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++DS  +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDS--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAE-----GKEKHSDKVNESGYRLN-DGSEQQNGSSLTNKASE
        KAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK+  E      +EK +  V +S    N D  E  NG   T +  E
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAE-----GKEKHSDKVNESGYRLN-DGSEQQNGSSLTNKASE

Q9LXV5 Nuclear transcription factor Y subunit A-11.6e-5049.05Show/hide
Query:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  PQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  PQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE E  E    +  E G   N  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A97.8e-4848.94Show/hide
Query:  MQSKSET-NNQLDS--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++DS  +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLDS--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAE-----GKEKHSDKVNESGYRLN-DGSEQQNGSSLTNKASE
        KAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK+  E      +EK +  V +S    N D  E  NG   T +  E
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAE-----GKEKHSDKVNESGYRLN-DGSEQQNGSSLTNKASE

AT5G12840.1 nuclear factor Y, subunit A11.2e-5149.05Show/hide
Query:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  PQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  PQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE E  E    +  E G   N  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ

AT5G12840.2 nuclear factor Y, subunit A11.5e-5149.81Show/hide
Query:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHS--AGSYR
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S   G   
Subjt:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHS--AGSYR

Query:  QDPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
         DP      + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  QDPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ
        KAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE E  E    +  E G   N  GSEQ
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ

AT5G12840.3 nuclear factor Y, subunit A11.2e-5149.05Show/hide
Query:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  PQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  PQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ
        E E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE E  E    +  E G   N  GSEQ
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ

AT5G12840.4 nuclear factor Y, subunit A11.5e-5149.81Show/hide
Query:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHS--AGSYR
        MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S   G   
Subjt:  MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHS--AGSYR

Query:  QDPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
         DP      + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  QDPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ
        KAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE E  E    +  E G   N  GSEQ
Subjt:  KAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESGYRLN-DGSEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGATTCAAATGGTGCACCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCATT
ACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCGGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGATGAAG
AAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCTGGAAGCTACAGACAGGATCCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCGGCAATG
CACGGTGAATGTCTGGCACAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCTTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTA
TGGTCATCAGCCCTTGGGCTATCCCATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTTGTGAATGCAAAGCAATACCAGG
GAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAATCAATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATTAGAAGG
TCAAGAAGTAGTGGAGGCCGTTTTGCGAAGAAAAGCGAAGCTGAGGGAAAGGAAAAGCATTCTGATAAAGTAAACGAGAGTGGTTACCGCCTAAATGACGGTTCTGAACA
GCAGAACGGAAGCTCCTTGACGAACAAGGCCTCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
AATTTTCATTTTTGGATTTCACCAAAACGATTAAATTTCAATCTCCCTCTTCTTTTTCTACTTTTCTTTTTTCCTTCCTTTAATTCTTATTATTATTCTTTATTTTATTT
TGAATTCTCTCCGATTTCTCTTCTCCCCCATCAGATTTTTCCCTTTTCTCCATTTGGACGTTGCTCCAATTCCTTCCGGGTCTGAAGGTATGCAGTCAAAGTCTGAAACC
AATAATCAGCTCGATTCAAATGGTGCACCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCATTACCTGTGGTTGGGGGAAATGC
TTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCGGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGATGAAGAAGATGATGTTTCTAAAGAAG
TGCAAGCTACTGGATCTCCACATTCTGCTGGAAGCTACAGACAGGATCCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCGGCAATGCACGGTGAATGTCTGGCACAG
TCTACACAACTCGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCTTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTATGGTCATCAGCCCTTGGGCTA
TCCCATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTTGTGAATGCAAAGCAATACCAGGGAATTTTGAGGCGAAGGCAAG
CACGTGCAAAAGCTGAGGCTGAGAAGAAATCAATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATTAGAAGGTCAAGAAGTAGTGGAGGCCGT
TTTGCGAAGAAAAGCGAAGCTGAGGGAAAGGAAAAGCATTCTGATAAAGTAAACGAGAGTGGTTACCGCCTAAATGACGGTTCTGAACAGCAGAACGGAAGCTCCTTGAC
GAACAAGGCCTCTGAGTAGCAAAGCAACCTGCACTGAATGCCAAGACAATGGCCAGAGTTGTTCAGTGGGGAATGAGGGATCAATTGCTTGTTTGTTAGAAGTACTGAGT
TCCTAGCAAAGCATGCTAGGCGGCAAATCATTCTTGGCTTTGTTGTTCTGTTGCTTTGTAGAAAAAGAAAAAGGGATGGTGAATGATATGTGTGACTTATAGGATCTCAT
GACTTCTTCAAAGGATTCCTCAAAAGTCTAAGAGATTTCTTCATTCCATTCTCCTTTTTTGCCTTTTTTGTACATAGTTTATGATGACGTAAGGGAGTGAGAACTTTGGT
CTCTTGTATTATATTAGCAGTGCGTGAAACTAAATGAATCATAAGGCTTAGGATAGATACAGTGATTGTGATTCACAAAGCTTAGACTTGAAAGATTTTAGATTTGAGTA
TCTAAGGTTTGACGGATTATTGATGCAAATTATAGTTTTCAGGTACAGAAATGGAAAGAGTTTAAATGGCTTCCTTCAGCTTTGACTATGACTTATTTTAAAGCCAAAGG
ATATTTTGTGTATGGAAGGGAAGGATTAATGGATGCATCTCACCCATTTGGAATTCATCCACCTTGAAACAGGATGGCTCAATCTATTCTTCTTCTTACTATTTCATGGG
TCTTTCCACATTATTTTTTATTGAAGATTTTACATTCTCAACCTTCTCTTTTACAAATTG
Protein sequenceShow/hide protein sequence
MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAM
HGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRR
SRSSGGRFAKKSEAEGKEKHSDKVNESGYRLNDGSEQQNGSSLTNKASE