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CSPI01G30430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G30430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPolyprotein
Genome locationChr1:24905233..24906063
RNA-Seq ExpressionCSPI01G30430
SyntenyCSPI01G30430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051217.1 polyprotein [Cucumis melo var. makuwa]3.7e-0753.03Show/hide
Query:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV
        +G +Q+P+G++PI +  RTCYKL  + F + ALIESP GKTVFFQ + FEN     VQKV+ W++V
Subjt:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV

KAG6590198.1 hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia]4.0e-2565.56Show/hide
Query:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIF------ENDDDDVVQKVTMWNQVQLPSDWPPRLHIPTIPRL
        KG DQ+ KGS PIVV+CRTCYKLNQ  FG EAL+ESPVGKTVFFQ +I            DVVQKVT W+QVQLPS+WPP+LHIP  P +
Subjt:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIF------ENDDDDVVQKVTMWNQVQLPSDWPPRLHIPTIPRL

KGN66493.1 hypothetical protein Csa_007053 [Cucumis sativus]1.5e-4882.79Show/hide
Query:  MSLFFKSCSSKNFAGDHSLEEEEYVEKGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPP
        +SLFF S +  N    H L       KGLD+IPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFE+DDDDVVQKVTMWNQVQLPSDWPP
Subjt:  MSLFFKSCSSKNFAGDHSLEEEEYVEKGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPP

Query:  RLHIPTIPRLVFGSSKEAQVSN
        RLHIPT+PRLVFGSSKEAQVSN
Subjt:  RLHIPTIPRLVFGSSKEAQVSN

TYK18870.1 hypothetical protein E5676_scaffold204G00720 [Cucumis melo var. makuwa]3.5e-2982.05Show/hide
Query:  TCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPPRLHIPTIPRLVFGSSKEAQVSN
        TCYKLNQN+FGSEALIESPVGKTVFFQ EIF ++  DVVQKVTMW+QVQLPSDWPP+L IPT P+LVFGSSKEAQ S+
Subjt:  TCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPPRLHIPTIPRLVFGSSKEAQVSN

TYK18873.1 polyprotein [Cucumis melo var. makuwa]3.7e-0753.03Show/hide
Query:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV
        +G +Q+P+G++PI +  RTCYKL  + F + ALIESP GKTVFFQ + FEN     VQKV+ W++V
Subjt:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein7.3e-4982.79Show/hide
Query:  MSLFFKSCSSKNFAGDHSLEEEEYVEKGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPP
        +SLFF S +  N    H L       KGLD+IPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFE+DDDDVVQKVTMWNQVQLPSDWPP
Subjt:  MSLFFKSCSSKNFAGDHSLEEEEYVEKGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPP

Query:  RLHIPTIPRLVFGSSKEAQVSN
        RLHIPT+PRLVFGSSKEAQVSN
Subjt:  RLHIPTIPRLVFGSSKEAQVSN

A0A0A0LZS0 Uncharacterized protein4.5e-0650Show/hide
Query:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV
        +G +Q+P+G++PI +  RTCYKL  +   + ALIESP GKTVFFQ   FEN      QKV+ W++V
Subjt:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV

A0A5A7U9X3 Polyprotein1.8e-0753.03Show/hide
Query:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV
        +G +Q+P+G++PI +  RTCYKL  + F + ALIESP GKTVFFQ + FEN     VQKV+ W++V
Subjt:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV

A0A5D3D5S0 Uncharacterized protein1.7e-2982.05Show/hide
Query:  TCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPPRLHIPTIPRLVFGSSKEAQVSN
        TCYKLNQN+FGSEALIESPVGKTVFFQ EIF ++  DVVQKVTMW+QVQLPSDWPP+L IPT P+LVFGSSKEAQ S+
Subjt:  TCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPPRLHIPTIPRLVFGSSKEAQVSN

A0A5D3D5V1 Polyprotein1.8e-0753.03Show/hide
Query:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV
        +G +Q+P+G++PI +  RTCYKL  + F + ALIESP GKTVFFQ + FEN     VQKV+ W++V
Subjt:  KGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCTTTTTTAAGTCTTGCAGCTCCAAGAATTTTGCTGGTGATCATTCATTAGAAGAAGAAGAATATGTTGAAAAAGGGCTTGATCAAATTCCAAAAGGGAGTGC
CCCAATTGTGGTGACATGTAGAACATGTTACAAGTTGAACCAAAACGATTTTGGATCAGAAGCTTTGATTGAGAGTCCTGTTGGGAAAACAGTGTTTTTTCAGATAGAGA
TTTTTGAAAATGATGATGATGATGTTGTTCAAAAAGTTACTATGTGGAATCAAGTTCAATTGCCTTCTGATTGGCCTCCTCGGCTGCATATACCTACGATCCCTAGGTTG
GTTTTTGGTTCTTCAAAAGAGGCTCAAGTAAGTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTCTTTTTTAAGTCTTGCAGCTCCAAGAATTTTGCTGGTGATCATTCATTAGAAGAAGAAGAATATGTTGAAAAAGGGCTTGATCAAATTCCAAAAGGGAGTGC
CCCAATTGTGGTGACATGTAGAACATGTTACAAGTTGAACCAAAACGATTTTGGATCAGAAGCTTTGATTGAGAGTCCTGTTGGGAAAACAGTGTTTTTTCAGATAGAGA
TTTTTGAAAATGATGATGATGATGTTGTTCAAAAAGTTACTATGTGGAATCAAGTTCAATTGCCTTCTGATTGGCCTCCTCGGCTGCATATACCTACGATCCCTAGGTTG
GTTTTTGGTTCTTCAAAAGAGGCTCAAGTAAGTAACTAA
Protein sequenceShow/hide protein sequence
MSLFFKSCSSKNFAGDHSLEEEEYVEKGLDQIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFENDDDDVVQKVTMWNQVQLPSDWPPRLHIPTIPRL
VFGSSKEAQVSN