; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G30610 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G30610
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding family protein
Genome locationChr1:25108723..25114607
RNA-Seq ExpressionCSPI01G30610
SyntenyCSPI01G30610
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR008111 - RNA-binding motif protein 8
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR033744 - RBM8, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139049.1 RNA-binding protein Y14 [Cucumis sativus]2.2e-102100Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

XP_022154366.1 RNA-binding protein Y14A [Momordica charantia]4.3e-9896.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+ GPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

XP_022961208.1 RNA-binding protein Y14-like [Cucurbita moschata]1.4e-9996.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+GGPKKTKGRGFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

XP_022988215.1 RNA-binding protein Y14A-like [Cucurbita maxima]2.0e-9895.43Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSL+GGPKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

XP_038880227.1 RNA-binding protein Y14A [Benincasa hispida]7.2e-10197.97Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+GGPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFG+FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

TrEMBL top hitse value%identityAlignment
A0A0A0M2V3 RRM domain-containing protein1.1e-102100Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

A0A1S3BNH9 RNA-binding protein 8A-B1.1e-102100Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

A0A6J1DNH7 RNA-binding protein Y14A2.1e-9896.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+ GPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

A0A6J1HB67 RNA-binding protein Y14-like6.5e-10096.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+GGPKKTKGRGFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

A0A6J1JIZ0 RNA-binding protein Y14A-like9.4e-9995.43Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSL+GGPKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

SwissProt top hitse value%identityAlignment
B7FAL5 RNA-binding protein Y14A1.0e-6567.32Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSG--GPKKTKGRGFREE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE
        + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG      G  G +KTKGRGFR++ + R++RLAG    SDFDSL S  GPGP RSIE
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSG--GPKKTKGRGFREE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE

Query:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRS-
        GWI+LVTGVHEEAQEDDL N F +FG++KNLHLNLDRRTGFVKGYALIEYE+FEEA+ AI A+DG ELLTQII+VDWAFS+GP++R+N R    RRSRS 
Subjt:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRS-

Query:  PRRRY
        PRRRY
Subjt:  PRRRY

F4I9J7 RNA-binding protein Y147.8e-6668.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTKGRGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNARPARERRSR
        ILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNARPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

Q28BZ1 RNA-binding protein 8A1.1e-3857.34Show/hide
Query:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  +     R+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  SAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRR
          ++G +L+ Q I+VDW F  GP   K  R +  RRSRSP RR
Subjt:  SAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRR

Q6ATR0 RNA-binding protein Y14B1.1e-4049.26Show/hide
Query:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSD---FDSLKSADGP--GPQRSIE
        A+ DVE VD+   E EE+D MDED           P P +           +S G  +++GR       R+T +  S+   FDSL  A  P  GPQRSIE
Subjt:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSD---FDSLKSADGP--GPQRSIE

Query:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSP
        GWI+LV+GV E+A+EDDL N F +FG +K+LHLNL+RRTG+ KGYAL+EYESFEEA+ AI AM+G +LLT+ + VDWAFS GPI++  +     RRSR+P
Subjt:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSP

Query:  RRR
         RR
Subjt:  RRR

Q6PH90 RNA-binding protein 8A-B3.6e-3957.34Show/hide
Query:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  +    TR+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  SAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRR
          ++G +L+ Q ++VDW F  GP   K  R +  RRSRSP RR
Subjt:  SAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRR

Arabidopsis top hitse value%identityAlignment
AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-6768.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTKGRGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNARPARERRSR
        ILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNARPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

AT3G11400.1 eukaryotic translation initiation factor 3G11.2e-0829.92Show/hide
Query:  GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
        G SS++S  P    G G       + R AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + 
Subjt:  GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE

Query:  SFEEAEKAISAMDGAELLTQIINVDWA
        S E+A++AI+ ++G      I+ V+WA
Subjt:  SFEEAEKAISAMDGAELLTQIINVDWA

AT3G11400.2 eukaryotic translation initiation factor 3G11.2e-0829.92Show/hide
Query:  GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
        G SS++S  P    G G       + R AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + 
Subjt:  GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE

Query:  SFEEAEKAISAMDGAELLTQIINVDWA
        S E+A++AI+ ++G      I+ V+WA
Subjt:  SFEEAEKAISAMDGAELLTQIINVDWA

AT5G64200.1 ortholog of human splicing factor SC355.3e-0931.62Show/hide
Query:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNAR---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A  +GP   K ++   
Subjt:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNAR---

Query:  -----PARERRSRSPRR
              +R  RSRSPRR
Subjt:  -----PARERRSRSPRR

AT5G64200.2 ortholog of human splicing factor SC355.3e-0931.62Show/hide
Query:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNAR---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A  +GP   K ++   
Subjt:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNAR---

Query:  -----PARERRSRSPRR
              +R  RSRSPRR
Subjt:  -----PARERRSRSPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGCTGATGTAGAGGCTGTCGACTTTGAGCCCGAGGAAGATGACCTCATGGACGAGGATGGGGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCTTTTCCTAA
GCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTCGCTTTCTGGAGGTCCAAAGAAGACTAAGGGTCGTGGATTTCGAGAGGAGTCTGATCGAAACACCCGCCTTGCTG
GGTCGGACTTCGATTCCCTCAAGTCTGCTGATGGCCCTGGCCCCCAACGATCTATTGAAGGATGGATCATTCTGGTAACTGGTGTCCATGAAGAGGCACAGGAGGATGAT
CTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATCGTCGTACTGGGTTCGTCAAGGGATATGCATTAATCGAATACGAGAGTTTTGA
GGAAGCAGAGAAAGCAATATCTGCCATGGATGGTGCTGAACTTCTGACCCAAATCATCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACGCAAGAC
CTGCTCGAGAACGACGTTCGAGGAGCCCTAGGAGGAGATACTGA
mRNA sequenceShow/hide mRNA sequence
AAATGAAAAATCTAAAAAAATTGGGTTAGCGGGCAAACAAGAAACCCTTGTTTCGATCCCCAAAACCCCCCATCCTTTCTCCCATCGTCTTTCTTCTTCCCTCGCCATTT
TTTAAGAACCAACAACCAGCTCTGACCAACATTTGATTACCCATGGCGAGCGCTGATGTAGAGGCTGTCGACTTTGAGCCCGAGGAAGATGACCTCATGGACGAGGATGG
GGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCTTTTCCTAAGCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTCGCTTTCTGGAGGTCCAAAGAAGACTAAGGGTC
GTGGATTTCGAGAGGAGTCTGATCGAAACACCCGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCTGCTGATGGCCCTGGCCCCCAACGATCTATTGAAGGATGGATC
ATTCTGGTAACTGGTGTCCATGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATCGTCGTACTGG
GTTCGTCAAGGGATATGCATTAATCGAATACGAGAGTTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGATGGTGCTGAACTTCTGACCCAAATCATCAATGTTGATT
GGGCATTCAGCCATGGACCCATCAGAAGGAAGAACGCAAGACCTGCTCGAGAACGACGTTCGAGGAGCCCTAGGAGGAGATACTGATCTTGAGGTGTAGAAACTCGATGT
GTGGTATTTGTGGATTTTAATGGGAAAGGTGTTTTTCTTGTGAATTGGATTAGGAGAGATAATTTCTACTGAGATCTTACTCAATTGTCTCAAGATTCCCCTGGTTTCCA
GCCTTTGTTTCTCGATCGTTGATGTGAATTGATGAATTGTATGTAACTTAGAGGATTTGAGGTCCATGATTTTCTTTTCTTCTTTTCTTCTTTTTTTGGATTAATTGAGG
TTTTTGCCATTTTGTGTTGAATATCTGCTATTATATATATTTTTTTGTTTTAAATTCGGCTCTACTGTGTGGCTTCTGGATTCATTCTCTCTTACCTATAGTTAACTTC
Protein sequenceShow/hide protein sequence
MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDD
LQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY