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CSPI01G31370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G31370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZf-CCHC domain-containing protein
Genome locationChr1:25899952..25900386
RNA-Seq ExpressionCSPI01G31370
SyntenyCSPI01G31370
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045496.1 uncharacterized protein E6C27_scaffold1202G00410 [Cucumis melo var. makuwa]8.9e-0759.57Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE
        +DEE+K+K FEGGL+ TIQT  T S +WSDF KL++A +++ERCLA+
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE

KAA0054739.1 uncharacterized protein E6C27_scaffold437G00090 [Cucumis melo var. makuwa]1.6e-0854.67Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE-EEEKSLKEKKSISMASREEEKKSCEEI
        +DEE K KRF+  LRT  +   T S  WSDFSKLVEATI  E+CLAE +EEK LKE+KS     R +EK   +E+
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE-EEEKSLKEKKSISMASREEEKKSCEEI

KAA0062762.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.3e-0548.39Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAEEEEKSLKEKKSISMA
        ++E DK KRFE GLRT I+   T S+DWSDFSKLVE  + VE+C+ E+++ +  +K   S +
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAEEEEKSLKEKKSISMA

TYJ96210.1 uncharacterized protein E5676_scaffold261G00500 [Cucumis melo var. makuwa]8.9e-0759.57Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE
        +DEE+K+K FEGGL+ TIQT  T S +WSDF KL++A +++ERCLA+
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE

TYJ99705.1 uncharacterized protein E5676_scaffold562G001040 [Cucumis melo var. makuwa]9.5e-0954.67Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE-EEEKSLKEKKSISMASREEEKKSCEEI
        +DEE K KRF+  LRT  +   T S  WSDFSKLVEATI  E+CLAE +EEK LKE+KS     R +EK   +E+
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE-EEEKSLKEKKSISMASREEEKKSCEEI

TrEMBL top hitse value%identityAlignment
A0A5A7TTP8 Retrotrans_gag domain-containing protein4.3e-0759.57Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE
        +DEE+K+K FEGGL+ TIQT  T S +WSDF KL++A +++ERCLA+
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE

A0A5A7UMQ3 Uncharacterized protein7.8e-0954.67Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE-EEEKSLKEKKSISMASREEEKKSCEEI
        +DEE K KRF+  LRT  +   T S  WSDFSKLVEATI  E+CLAE +EEK LKE+KS     R +EK   +E+
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE-EEEKSLKEKKSISMASREEEKKSCEEI

A0A5A7V3F2 Zf-CCHC domain-containing protein6.2e-0648.39Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAEEEEKSLKEKKSISMA
        ++E DK KRFE GLRT I+   T S+DWSDFSKLVE  + VE+C+ E+++ +  +K   S +
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAEEEEKSLKEKKSISMA

A0A5D3B8N5 Retrotrans_gag domain-containing protein4.3e-0759.57Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE
        +DEE+K+K FEGGL+ TIQT  T S +WSDF KL++A +++ERCLA+
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE

A0A5D3BN18 Uncharacterized protein4.6e-0954.67Show/hide
Query:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE-EEEKSLKEKKSISMASREEEKKSCEEI
        +DEE K KRF+  LRT  +   T S  WSDFSKLVEATI  E+CLAE +EEK LKE+KS     R +EK   +E+
Subjt:  MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAE-EEEKSLKEKKSISMASREEEKKSCEEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGGAAGATAAGTATAAGCGTTTTGAGGGAGGTTTGAGGACAACAATTCAGACTCCAACGACAGGGAGTGTGGATTGGTCAGACTTTTCTAAGCTTGTTGAGGC
GACCATTCAAGTTGAAAGGTGCTTGGCTGAAGAAGAAGAAAAGAGTTTGAAAGAAAAGAAGTCCATTTCGATGGCGAGTAGAGAAGAAGAAAAGAAGAGTTGTGAAGAAA
TAATTGGACATTACCAAAGTGAATGCCAAGAGAAGGCCAAAGTTAGTGAGGAACCAACACAAATAGGAGTGGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGGAAGATAAGTATAAGCGTTTTGAGGGAGGTTTGAGGACAACAATTCAGACTCCAACGACAGGGAGTGTGGATTGGTCAGACTTTTCTAAGCTTGTTGAGGC
GACCATTCAAGTTGAAAGGTGCTTGGCTGAAGAAGAAGAAAAGAGTTTGAAAGAAAAGAAGTCCATTTCGATGGCGAGTAGAGAAGAAGAAAAGAAGAGTTGTGAAGAAA
TAATTGGACATTACCAAAGTGAATGCCAAGAGAAGGCCAAAGTTAGTGAGGAACCAACACAAATAGGAGTGGCTGCTTAG
Protein sequenceShow/hide protein sequence
MDEEDKYKRFEGGLRTTIQTPTTGSVDWSDFSKLVEATIQVERCLAEEEEKSLKEKKSISMASREEEKKSCEEIIGHYQSECQEKAKVSEEPTQIGVAA