CuGenDBv2

Gene ID	CSPI01G31440
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Coiled-coil domain-containing protein R3HCC1L isoform X1
Genome location	Chr1:26066332..26068285
RNA-Seq Expression	CSPI01G31440
Synteny	CSPI01G31440
Gene Ontology terms	NA
InterPro domains	IPR039884 - Coiled-coil domain-containing protein R3HC1/R3HCL

Homology

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GenBank top hits

e value

%identity

Alignment

TYK07868.1 coiled-coil domain-containing protein R3HCC1L isoform X1 [Cucumis melo var. makuwa]

2.5e-67

92.72

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MDNEQEHQ+PRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQ SQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKI+ 
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDS
        EDRTSPTTVSLSSVDEASVGTGNLDRT+DSPDNAVSC+ASLDDD  + L S
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDS

XP_004139076.1 coiled-coil domain-containing protein R3HCC1L isoform X1 [Cucumis sativus]

2.0e-69

98.63

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MD EQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF
        EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDD+
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF

XP_008450290.1 PREDICTED: coiled-coil domain-containing protein R3HCC1L isoform X1 [Cucumis melo]

3.3e-67

95.21

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MDNEQEHQ+PRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQ SQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKI+ 
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF
        EDRTSPTTVSLSSVDEASVGTGNLDRT+DSPDNAVSC+ASLDDDD+
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF

XP_008450291.1 PREDICTED: uncharacterized protein LOC103491941 isoform X2 [Cucumis melo]

3.3e-67

95.21

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MDNEQEHQ+PRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQ SQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKI+ 
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF
        EDRTSPTTVSLSSVDEASVGTGNLDRT+DSPDNAVSC+ASLDDDD+
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF

XP_031743492.1 uncharacterized protein LOC101203386 isoform X2 [Cucumis sativus]

2.0e-69

98.63

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MD EQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF
        EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDD+
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXV6 Uncharacterized protein

2.8e-112

99.53

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MD EQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDSIDFYMLDSMNWKSKFPLILEDGNRFGFLEDKQIVPLWQTSCASFWLVFN
        EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDSIDFYMLDSMNWKSKFPLILEDGNRFGFLEDKQIVPLWQTSCASFWLVFN
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDSIDFYMLDSMNWKSKFPLILEDGNRFGFLEDKQIVPLWQTSCASFWLVFN

Query:  LPQRVVSKQSDL
        LPQRVVSKQSDL
Subjt:  LPQRVVSKQSDL

A0A1S3BNW5 coiled-coil domain-containing protein R3HCC1L isoform X1

1.6e-67

95.21

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MDNEQEHQ+PRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQ SQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKI+ 
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF
        EDRTSPTTVSLSSVDEASVGTGNLDRT+DSPDNAVSC+ASLDDDD+
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF

A0A1S3BPK1 uncharacterized protein LOC103491941 isoform X2

1.6e-67

95.21

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MDNEQEHQ+PRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQ SQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKI+ 
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF
        EDRTSPTTVSLSSVDEASVGTGNLDRT+DSPDNAVSC+ASLDDDD+
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDF

A0A5A7TF83 Coiled-coil domain-containing protein R3HCC1L isoform X1

7.9e-67

92.05

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MDNEQEH +PRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQ SQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKI+ 
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDS
        EDRTSPTTVSLSSVDEASVGTGNLDRT+DSPDNAVSC+ASLDDD  + L S
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDS

A0A5D3C9L2 Coiled-coil domain-containing protein R3HCC1L isoform X1

1.2e-67

92.72

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Query:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN
        MDNEQEHQ+PRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQ SQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKI+ 
Subjt:  MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMN

Query:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDS
        EDRTSPTTVSLSSVDEASVGTGNLDRT+DSPDNAVSC+ASLDDD  + L S
Subjt:  EDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G22120.1 unknown protein

3.8e-13

35.4

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Query:  NEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDP-------QLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQA---QVSCP
        NE+E +    NWSE VEDLV AGD  AAIS L+S+ ++LQ+   S+          QL+AALT L+ LYSS+GLSLK+D++  ++ L+K +A    ++  
Subjt:  NEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDP-------QLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQA---QVSCP

Query:  TGYGKIMNEDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDSID
           G + N+   S    S  +V       G  + ++ S  N+ +  +S  DDD+  L  ++
Subjt:  TGYGKIMNEDRTSPTTVSLSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDSID

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGACAATGAACAAGAACATCAAAGCCCGCGATCTAACTGGAGCGAGACTGTGGAAGACCTCGTCACTGCCGGAGACACTGATGCTGCTATTTCTCTTCTTCAATCGGT
GGTTTCCGACCTCCAAACTTCACAAAACTCTAATCCAGATCCTCAGTTGGCTGCCGCTCTCACCGACTTGTCCGCTCTCTACTCTTCTAAAGGCCTCTCTCTCAAAGCCG
ACGACATTGCGGCTAAAGCTTTCCTTCTTAAACACCAAGCCCAAGTCTCTTGTCCTACTGGGTACGGGAAGATTATGAATGAGGATCGAACATCTCCCACGACTGTTTCG
CTGTCTTCTGTCGATGAAGCGTCCGTTGGAACTGGTAATTTGGATCGGACGAGGGATAGTCCAGACAATGCTGTATCCTGTTCTGCGTCTTTGGATGATGATGATTTCTA
TATGCTGGACTCTATAGATTTCTATATGCTGGACTCTATGAATTGGAAGTCTAAGTTTCCGTTAATCCTGGAAGATGGTAACAGGTTTGGCTTTTTGGAGGACAAACAGA
TTGTGCCATTATGGCAAACCTCTTGTGCTTCTTTTTGGCTAGTCTTTAATCTACCACAAAGGGTGGTGTCAAAACAATCAGACCTGTAA

mRNA sequence

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AAACTTTCGGTTTTAGACACATTTGTGATTGAGTTAAATAAAGTGGATGTATTTAGGAAATGTATATAAACAAAGGAGAAACAGAGCTCGTTCATGGCGTAGCAGCACAG
ATATTTACGAACTTTCTCCCCTATTTTCACCAACACAATCTCTAAATCTCATCTTCCTCCATTGTTCAACAATCAGCCACAGCCATGGACAATGAACAAGAACATCAAAG
CCCGCGATCTAACTGGAGCGAGACTGTGGAAGACCTCGTCACTGCCGGAGACACTGATGCTGCTATTTCTCTTCTTCAATCGGTGGTTTCCGACCTCCAAACTTCACAAA
ACTCTAATCCAGATCCTCAGTTGGCTGCCGCTCTCACCGACTTGTCCGCTCTCTACTCTTCTAAAGGCCTCTCTCTCAAAGCCGACGACATTGCGGCTAAAGCTTTCCTT
CTTAAACACCAAGCCCAAGTCTCTTGTCCTACTGGGTACGGGAAGATTATGAATGAGGATCGAACATCTCCCACGACTGTTTCGCTGTCTTCTGTCGATGAAGCGTCCGT
TGGAACTGGTAATTTGGATCGGACGAGGGATAGTCCAGACAATGCTGTATCCTGTTCTGCGTCTTTGGATGATGATGATTTCTATATGCTGGACTCTATAGATTTCTATA
TGCTGGACTCTATGAATTGGAAGTCTAAGTTTCCGTTAATCCTGGAAGATGGTAACAGGTTTGGCTTTTTGGAGGACAAACAGATTGTGCCATTATGGCAAACCTCTTGT
GCTTCTTTTTGGCTAGTCTTTAATCTACCACAAAGGGTGGTGTCAAAACAATCAGACCTGTAA

Protein sequence

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MDNEQEHQSPRSNWSETVEDLVTAGDTDAAISLLQSVVSDLQTSQNSNPDPQLAAALTDLSALYSSKGLSLKADDIAAKAFLLKHQAQVSCPTGYGKIMNEDRTSPTTVS
LSSVDEASVGTGNLDRTRDSPDNAVSCSASLDDDDFYMLDSIDFYMLDSMNWKSKFPLILEDGNRFGFLEDKQIVPLWQTSCASFWLVFNLPQRVVSKQSDL

CSPI01G31440 (gene) of Cucumber (PI 183967) v1 genome