CuGenDBv2

Gene ID	CSPI01G31750
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Tubulin-folding cofactor E
Genome location	Chr1:26438563..26439426
RNA-Seq Expression	CSPI01G31750
Synteny	CSPI01G31750
Gene Ontology terms	GO:0000226 - microtubule cytoskeleton organization (biological process) GO:0007021 - tubulin complex assembly (biological process) GO:0007023 - post-chaperonin tubulin folding pathway (biological process) GO:0005737 - cytoplasm (cellular component) GO:0043014 - alpha-tubulin binding (molecular function)
InterPro domains	IPR029071 - Ubiquitin-like domain superfamily IPR044079 - TBCE, ubiquitin-like (Ubl) domain IPR044994 - Tubulin-specific chaperone E

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008445986.1 PREDICTED: tubulin-folding cofactor E isoform X1 [Cucumis melo]

2.2e-61

93.98

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD N E+T RLHPRFEELK FYGIEDN AS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPP TSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

XP_008445987.1 PREDICTED: tubulin-folding cofactor E isoform X2 [Cucumis melo]

2.2e-61

93.98

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD N E+T RLHPRFEELK FYGIEDN AS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPP TSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

XP_008445988.1 PREDICTED: tubulin-folding cofactor E isoform X3 [Cucumis melo]

2.2e-61

93.98

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD N E+T RLHPRFEELK FYGIEDN AS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPP TSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

XP_011660193.1 tubulin-folding cofactor E isoform X2 [Cucumis sativus]

5.6e-65

98.5

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD NHEETLRLHPRFEELKSFYGIEDNSAS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

XP_031736056.1 tubulin-folding cofactor E isoform X1 [Cucumis sativus]

5.6e-65

98.5

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD NHEETLRLHPRFEELKSFYGIEDNSAS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXY2 Uncharacterized protein

2.7e-65

98.5

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD NHEETLRLHPRFEELKSFYGIEDNSAS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

A0A1S3BDZ7 Tubulin-folding cofactor E

1.1e-61

93.98

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD N E+T RLHPRFEELK FYGIEDN AS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPP TSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

A0A1S3BEN9 Tubulin-folding cofactor E

1.1e-61

93.98

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD N E+T RLHPRFEELK FYGIEDN AS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPP TSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

A0A1S3BEU4 Tubulin-folding cofactor E

1.1e-61

93.98

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD N E+T RLHPRFEELK FYGIEDN AS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPP TSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

A0A5A7SYG1 Tubulin-folding cofactor E

1.1e-61

93.98

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMSNLD N E+T RLHPRFEELK FYGIEDN AS GPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPP TSVGKLKMLCESFFKLKSIKLKLYLQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

SwissProt top hits

e value

%identity

Alignment

Q5U508 Tubulin-specific chaperone E

4.4e-04

31.62

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Query:  LRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKL-YLQEEDSPMPILLEDD
        L+ HPR+  L   YG  D         P  L + L+++T++C      +K P+ KKLP + +V K+K L     K+    LKL Y   +     I LE+D
Subjt:  LRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKL-YLQEEDSPMPILLEDD

Query:  MTSLMDLGVGNESNILV
        +  L    V N   +LV
Subjt:  MTSLMDLGVGNESNILV

Q8GRL7 Tubulin-folding cofactor E

3.3e-36

59.4

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMS L+    E   LHPRF ELK  +GIED  AS   +GP+ ++SGLISITLKCVG S+GEKP +TKKLP + +VGKLK+L E+FFKLKSIK +L+LQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        E SP P  L+D+  +L+D+G+ + S +LVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

Arabidopsis top hits

e value

%identity

Alignment

AT1G71440.1 tubulin folding cofactor E / Pfifferling (PFI)

2.4e-37

59.4

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Query:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE
        MVMS L+    E   LHPRF ELK  +GIED  AS   +GP+ ++SGLISITLKCVG S+GEKP +TKKLP + +VGKLK+L E+FFKLKSIK +L+LQE
Subjt:  MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQE

Query:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES
        E SP P  L+D+  +L+D+G+ + S +LVDEES
Subjt:  EDSPMPILLEDDMTSLMDLGVGNESNILVDEES

Sequences

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CDS sequence

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ATGGTTATGTCAAATTTGGATCGCAATCACGAGGAAACGTTGAGGCTACATCCTAGATTTGAAGAGCTTAAGAGTTTTTATGGGATTGAAGATAATAGTGCATCATTCGG
ACCAGCCGGACCTCAGAAGCTGTCTTCTGGTCTCATTTCAATCACTTTAAAGTGTGTGGGAGCATCAATTGGTGAGAAGCCACCAGTGACAAAGAAACTGCCACCCACTA
CATCAGTTGGCAAGTTAAAGATGCTTTGTGAAAGCTTTTTCAAACTAAAATCTATCAAGCTAAAGTTGTATCTTCAAGAAGAGGATTCTCCCATGCCGATATTGCTTGAG
GATGATATGACATCCCTGATGGATCTTGGCGTTGGGAATGAATCTAATATTCTTGTGGATGAAGAGAGTTAA

mRNA sequence

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Protein sequence

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MVMSNLDRNHEETLRLHPRFEELKSFYGIEDNSASFGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLKMLCESFFKLKSIKLKLYLQEEDSPMPILLE
DDMTSLMDLGVGNESNILVDEES

CSPI01G31750 (gene) of Cucumber (PI 183967) v1 genome