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CSPI01G31980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G31980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAcetohydroxy-acid synthase small subunit
Genome locationChr1:26707016..26713816
RNA-Seq ExpressionCSPI01G31980
SyntenyCSPI01G31980
Gene Ontology termsGO:0009097 - isoleucine biosynthetic process (biological process)
GO:0009099 - valine biosynthetic process (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005829 - cytosol (cellular component)
GO:0003984 - acetolactate synthase activity (molecular function)
GO:1990610 - acetolactate synthase regulator activity (molecular function)
InterPro domainsIPR004789 - Acetolactate synthase, small subunit
IPR019455 - Acetolactate synthase, small subunit, C-terminal
IPR027271 - Acetolactate synthase/Transcription factor NikR, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038202.1 acetolactate synthase small subunit 1 [Cucumis melo var. makuwa]4.2e-6193.89Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRP+DSFVGDAIQS  G+V TST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

XP_004139096.1 acetolactate synthase small subunit 1, chloroplastic [Cucumis sativus]1.7e-6296.95Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRPI+SFV DAIQSLKGQVSTST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

XP_008443657.1 PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis melo]4.2e-6193.89Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRP+DSFVGDAIQS  G+V TST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

XP_023520675.1 acetolactate synthase small subunit 1, chloroplastic-like [Cucurbita pepo subsp. pepo]2.5e-5887.79Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDIS++PQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVD SEHS+TIEVTGDPGKLVAVERNFSKFGI+ELARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRP++ FVGD+IQS+ G +STST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

XP_038880022.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X1 [Benincasa hispida]5.5e-6193.89Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRP+D FVGDAIQSL G+V TST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

TrEMBL top hitse value%identityAlignment
A0A0A0LXQ8 ALS_ss_C domain-containing protein1.3e-6893.96Show/hide
Query:  MIPFPELVSKLFLRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREK
        MIPFPELV+    +VEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREK
Subjt:  MIPFPELVSKLFLRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREK

Query:  RGETAPFWRFSAASYPDLEDSRPIDSFVGDAIQSLKGQVSTSTVRTFVL
        RGETAPFWRFSAASYPDLEDSRPI+SFV DAIQSLKGQVSTSTV TFVL
Subjt:  RGETAPFWRFSAASYPDLEDSRPIDSFVGDAIQSLKGQVSTSTVRTFVL

A0A1S3B8L7 Acetohydroxy-acid synthase small subunit2.0e-6193.89Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRP+DSFVGDAIQS  G+V TST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

A0A5A7T3Z5 Acetohydroxy-acid synthase small subunit2.0e-6193.89Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRP+DSFVGDAIQS  G+V TST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

A0A6J1EAN7 Acetohydroxy-acid synthase small subunit1.2e-5887.79Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDIS++PQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVD SEHS+TIEVTGDPGKLVAVERNFSKFGI+ELARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRP++ FVGD+IQS+ G +STST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

A0A6J1L3C2 Acetohydroxy-acid synthase small subunit1.2e-5887.79Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VEDIS++PQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVD SEHS+TIEVTGDPGKLVAVERNFSKFGI+ELARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST
        ASYPDLEDSRP++ FVGD+IQS+ G +STST
Subjt:  ASYPDLEDSRPIDSFVGDAIQSLKGQVSTST

SwissProt top hitse value%identityAlignment
Q55141 Acetolactate synthase small subunit8.9e-2258.62Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRRE
        ++V+DI+  P VEREL+L+K++A++  RAE++ L  +FR +IVDISE +VTIEV GDPGK+VA+ +  +KFGI+E+ARTGKIAL RE
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRRE

Q93YZ7 Acetolactate synthase small subunit 2, chloroplastic2.0e-4272.32Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        L+VEDIS +PQVEREL+L+K+NA   +RAEIMWLVD FR ++VDI+EH++TIEVTGDPGK++AVERN  KF IRE+ RTGKIALRREK G TAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPI
        ASYPDL++  P+
Subjt:  ASYPDLEDSRPI

Q9FFF4 Acetolactate synthase small subunit 1, chloroplastic1.3e-4177.36Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VED+S++P VEREL+L+KLNAD STR+EIMWLVDIFR KIVD SE S+TIEVTGDPGK+VA+  N  KFGI+E+ARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDL
        ASYP L
Subjt:  ASYPDL

Q9SMC2 Acetolactate synthase small subunit 1, chloroplastic1.4e-4377.57Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VED+S++PQVEREL+L+K++AD   RAE+MWLVD+FR KIVDIS+ S+TIEVTGDPGK+VAV+RN SKFGIRE+ARTGKIALRREK GE+APFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLE
        ASYPDLE
Subjt:  ASYPDLE

Q9TLY1 Acetolactate synthase small subunit1.7e-2051.09Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGET
        L+V++I+  P VEREL+L+K+NA +S+R EI+ ++ +FR K+VD+SE+ + +E+TGDPGK+ A+++   KFGI E+ARTGKIAL R  +  T
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGET

Arabidopsis top hitse value%identityAlignment
AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein1.4e-4372.32Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        L+VEDIS +PQVEREL+L+K+NA   +RAEIMWLVD FR ++VDI+EH++TIEVTGDPGK++AVERN  KF IRE+ RTGKIALRREK G TAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPI
        ASYPDL++  P+
Subjt:  ASYPDLEDSRPI

AT2G31810.2 ACT domain-containing small subunit of acetolactate synthase protein1.4e-4372.32Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        L+VEDIS +PQVEREL+L+K+NA   +RAEIMWLVD FR ++VDI+EH++TIEVTGDPGK++AVERN  KF IRE+ RTGKIALRREK G TAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPI
        ASYPDL++  P+
Subjt:  ASYPDLEDSRPI

AT2G31810.3 ACT domain-containing small subunit of acetolactate synthase protein1.4e-4372.32Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        L+VEDIS +PQVEREL+L+K+NA   +RAEIMWLVD FR ++VDI+EH++TIEVTGDPGK++AVERN  KF IRE+ RTGKIALRREK G TAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDLEDSRPI
        ASYPDL++  P+
Subjt:  ASYPDLEDSRPI

AT5G16290.1 VALINE-TOLERANT 19.4e-4377.36Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VED+S++P VEREL+L+KLNAD STR+EIMWLVDIFR KIVD SE S+TIEVTGDPGK+VA+  N  KFGI+E+ARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDL
        ASYP L
Subjt:  ASYPDL

AT5G16290.2 VALINE-TOLERANT 19.4e-4377.36Show/hide
Query:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA
        ++VED+S++P VEREL+L+KLNAD STR+EIMWLVDIFR KIVD SE S+TIEVTGDPGK+VA+  N  KFGI+E+ARTGKIALRREK GETAPFWRFSA
Subjt:  LRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSA

Query:  ASYPDL
        ASYP L
Subjt:  ASYPDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTTTTCCAGAGTTAGTGAGTAAGTTGTTTCTTAGGGTAGAAGATATCTCAAGACAGCCCCAAGTGGAGCGTGAGTTGGTGCTTATGAAACTCAATGCAGATTC
AAGTACTCGTGCTGAGATAATGTGGTTAGTAGACATCTTCAGAGGAAAAATTGTGGATATTTCAGAACATTCAGTGACTATTGAGGTGACCGGAGATCCTGGTAAGCTGG
TTGCTGTTGAAAGAAATTTCAGTAAATTTGGAATTAGAGAACTTGCTAGAACTGGAAAGATAGCATTGAGAAGGGAGAAAAGGGGGGAGACAGCTCCCTTTTGGAGGTTC
TCAGCAGCCTCTTATCCTGATCTTGAAGATTCGAGGCCAATTGACTCATTTGTAGGGGATGCAATTCAATCACTCAAAGGCCAAGTCTCTACATCAACTGTACGTACTTT
TGTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTTTTCCAGAGTTAGTGAGTAAGTTGTTTCTTAGGGTAGAAGATATCTCAAGACAGCCCCAAGTGGAGCGTGAGTTGGTGCTTATGAAACTCAATGCAGATTC
AAGTACTCGTGCTGAGATAATGTGGTTAGTAGACATCTTCAGAGGAAAAATTGTGGATATTTCAGAACATTCAGTGACTATTGAGGTGACCGGAGATCCTGGTAAGCTGG
TTGCTGTTGAAAGAAATTTCAGTAAATTTGGAATTAGAGAACTTGCTAGAACTGGAAAGATAGCATTGAGAAGGGAGAAAAGGGGGGAGACAGCTCCCTTTTGGAGGTTC
TCAGCAGCCTCTTATCCTGATCTTGAAGATTCGAGGCCAATTGACTCATTTGTAGGGGATGCAATTCAATCACTCAAAGGCCAAGTCTCTACATCAACTGTACGTACTTT
TGTTCTTTAACATGAGTGCTTTGCTGAAACTTTTGCTTTTCATGACTTCTGAAGCG
Protein sequenceShow/hide protein sequence
MIPFPELVSKLFLRVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRF
SAASYPDLEDSRPIDSFVGDAIQSLKGQVSTSTVRTFVL