; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G32080 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G32080
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-directed DNA polymerase-like protein
Genome locationChr1:26862968..26864397
RNA-Seq ExpressionCSPI01G32080
SyntenyCSPI01G32080
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035681.1 reverse transcriptase [Cucumis melo var. makuwa]7.0e-12758.06Show/hide
Query:  YSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLTKRPKYSN
        YSQYQNC Q ++ VA+YIEEFHR S R NLSENEQHQIARFI GLRFDIKEKVKL SF++LSEA+S AETV+EM  +R KN +++  WE   +K+  Y  
Subjt:  YSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLTKRPKYSN

Query:  KATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ-----------------------------SNLEEEAELIEADDGDRI
        K   QPSTS+  K K ++ Q+    KKKE++ RGKTQNNYTRPSLGKCF CG+                                EEE ELIEADDGDRI
Subjt:  KATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ-----------------------------SNLEEEAELIEADDGDRI

Query:  SCVIQRVLVAPKEETSPQRHSLFKTRCTINRWVERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDE--------------GHGNMTLKPYL
        SC++QRVL+ PKEET+PQ HSLFKTRCTIN  V  H DPYKIGWVKKGGET+INEIC +PLSIGN YKDQI CD                H   TL    
Subjt:  SCVIQRVLVAPKEETSPQRHSLFKTRCTINRWVERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDE--------------GHGNMTLKPYL

Query:  RG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQ
        RG E   EF WM K+V+LLPL KKN E  R  K+       +  ++  K+  +DLL L++ DKS+    E+VEP+L++LF EFPHLKKEP GLPPL +IQ
Subjt:  RG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQ

Query:  HQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
        HQIDL+P ASLPNLPHYRMSP+EYQ+LHDHIEDL
Subjt:  HQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

KAA0040321.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]1.1e-11154.61Show/hide
Query:  MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNL
        MKKLLKA FLPPNYEQTLY+QYQNC Q +R+VA+YIEEF R S  TN SENEQHQIARFI  LRFDIKEKVKLQ F+ LSEA+S AETV+EM   + K+ 
Subjt:  MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNL

Query:  SQKAPWEATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQSNLEEEAELIEADDGDRISCVIQRVLVAP
        S+K  WE +  K+  Y++K + QPSTSV  K K+VETQD           +GK    Y   S           LEEE ELIEADDG+RI CVIQR+L+  
Subjt:  SQKAPWEATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQSNLEEEAELIEADDGDRISCVIQRVLVAP

Query:  KEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDEGHGNMTLKPY
        KEET+PQ   LFKTRC IN  V                          E H +PYKIGWVKKGGET+                      EG GN TLKPY
Subjt:  KEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDEGHGNMTLKPY

Query:  LRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQ
         RG    EF WM K++VLLPL+ KN EGT+H+K+ G   + +  +   ++  +D+L L+IVDK+  EQ E++EPKLQQL  EFPHLKKEP GLPPL +IQ
Subjt:  LRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQ

Query:  HQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
        HQIDLI GASLPNL +YRMSP EYQILH+HI+DL
Subjt:  HQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

KAA0047078.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-11154.24Show/hide
Query:  EQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLTKRP
        + TLYSQYQNC Q TR+VADYI+EFH    R NLSENEQHQIARFI GLRFDIKEK+KLQ F+ LSEA+SFAETV+EMNAIRTKN               
Subjt:  EQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLTKRP

Query:  KYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------SNLEEEAELIEADDG
                 PSTS QGK KEVETQDLA++KK+E VN+GK QN Y RPSLGKCF CGQ                              LEEEA+LIEADDG
Subjt:  KYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------SNLEEEAELIEADDG

Query:  DRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQI
         R+SCVIQRVL+APKEET+PQ HSLFKTRCTIN  V                          E H +PYKIGWVKKGGET I+EIC VPLSIGNGYKDQI
Subjt:  DRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQI

Query:  ACDEGHGNMTLKPYLRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHL
         CD                            ++ + ++                            +DLL LIIVDKS EEQLE ++ +LQQLF+EFPHL
Subjt:  ACDEGHGNMTLKPYLRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHL

Query:  KKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
        KKEP GLPPL +IQ QIDLIPGASLP L HYRMSP EYQILH+HIE L
Subjt:  KKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

TYK30863.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa]4.1e-12757.21Show/hide
Query:  PPNYEQTL---YSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWE
        P +Y Q +   YSQYQNC Q ++ VA+YIEEFHR   R NLSENEQHQIARFI GLRFDIKEKVKL SF++LSEA+S AETV+EM  +R KN +++  WE
Subjt:  PPNYEQTL---YSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWE

Query:  ATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------SNLEEEAE
           +K+  Y  K   QPSTS+  K K ++ Q+    KKKE++ RGKTQNNYTRPSLGKCF CG+                               EEE E
Subjt:  ATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------SNLEEEAE

Query:  LIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWVERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDE--------------G
        LIEADDGDRISC++QRVL+ PKEET+PQ HSLFKTRCTIN  V  H DPYKIGWVKKGGET+INEIC +PLSIGN YKDQI CD                
Subjt:  LIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWVERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDE--------------G

Query:  HGNMTLKPYLRG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEP
        H   TL    RG E   EF WM K+V+LLPL KKN E  R  K+       +  ++  K+  +DLL L++ DKS+    E+VEP+L++LF EFPHLKKEP
Subjt:  HGNMTLKPYLRG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEP

Query:  MGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
         GLPPL +IQHQIDL+P ASLPNLPHYRMSP+EYQ+LHDHIEDL
Subjt:  MGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

XP_031744062.1 uncharacterized protein LOC116404773 [Cucumis sativus]6.2e-11551.57Show/hide
Query:  MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNL
        MKKLLKARFLPPNYEQTLY+QYQNC Q  RSVADYIEEFHR S RTNLSENEQHQ+ARF+                          ETV+EM AIR+KNL
Subjt:  MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNL

Query:  SQKAPWEATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQS---------------------------N
        ++++ WE T TK     +K  +QPSTS +GK KEV+ Q++A E+KKE   +   QN+Y+RPSLGKCF CGQ+                            
Subjt:  SQKAPWEATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQS---------------------------N

Query:  LEEEAELIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICA
         EEE ELIEADDG+R+SC IQRVL+ PKEE + QRH LFKTRCTIN  V                          E H  PYKIGWV+KGGE  ++EIC 
Subjt:  LEEEAELIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICA

Query:  VPLSIGNGYKDQIACDEGHGNM------------TLKPYLRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKD----LLR
        VPLSIGN YKDQI CD    ++            T   +   E   EF WM ++VVLLP+TKK  EG R  K       QL      KK  K+    +L 
Subjt:  VPLSIGNGYKDQIACDEGHGNM------------TLKPYLRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKD----LLR

Query:  LIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
        L++++K+KE+Q+E +EPKLQQL  EFPH+K+EP GLPPL +IQH IDLIPGASLPNL HYRMSPQEY+ILHDHIE+L
Subjt:  LIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

TrEMBL top hitse value%identityAlignment
A0A5A7T256 Reverse transcriptase3.4e-12758.06Show/hide
Query:  YSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLTKRPKYSN
        YSQYQNC Q ++ VA+YIEEFHR S R NLSENEQHQIARFI GLRFDIKEKVKL SF++LSEA+S AETV+EM  +R KN +++  WE   +K+  Y  
Subjt:  YSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLTKRPKYSN

Query:  KATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ-----------------------------SNLEEEAELIEADDGDRI
        K   QPSTS+  K K ++ Q+    KKKE++ RGKTQNNYTRPSLGKCF CG+                                EEE ELIEADDGDRI
Subjt:  KATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ-----------------------------SNLEEEAELIEADDGDRI

Query:  SCVIQRVLVAPKEETSPQRHSLFKTRCTINRWVERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDE--------------GHGNMTLKPYL
        SC++QRVL+ PKEET+PQ HSLFKTRCTIN  V  H DPYKIGWVKKGGET+INEIC +PLSIGN YKDQI CD                H   TL    
Subjt:  SCVIQRVLVAPKEETSPQRHSLFKTRCTINRWVERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDE--------------GHGNMTLKPYL

Query:  RG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQ
        RG E   EF WM K+V+LLPL KKN E  R  K+       +  ++  K+  +DLL L++ DKS+    E+VEP+L++LF EFPHLKKEP GLPPL +IQ
Subjt:  RG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQ

Query:  HQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
        HQIDL+P ASLPNLPHYRMSP+EYQ+LHDHIEDL
Subjt:  HQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

A0A5D3C3X9 Reverse transcriptase6.9e-11254.24Show/hide
Query:  EQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLTKRP
        + TLYSQYQNC Q TR+VADYI+EFH    R NLSENEQHQIARFI GLRFDIKEK+KLQ F+ LSEA+SFAETV+EMNAIRTKN               
Subjt:  EQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLTKRP

Query:  KYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------SNLEEEAELIEADDG
                 PSTS QGK KEVETQDLA++KK+E VN+GK QN Y RPSLGKCF CGQ                              LEEEA+LIEADDG
Subjt:  KYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------SNLEEEAELIEADDG

Query:  DRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQI
         R+SCVIQRVL+APKEET+PQ HSLFKTRCTIN  V                          E H +PYKIGWVKKGGET I+EIC VPLSIGNGYKDQI
Subjt:  DRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQI

Query:  ACDEGHGNMTLKPYLRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHL
         CD                            ++ + ++                            +DLL LIIVDKS EEQLE ++ +LQQLF+EFPHL
Subjt:  ACDEGHGNMTLKPYLRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHL

Query:  KKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
        KKEP GLPPL +IQ QIDLIPGASLP L HYRMSP EYQILH+HIE L
Subjt:  KKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

A0A5D3DGR0 Reverse transcriptase4.2e-9342.62Show/hide
Query:  MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNL
        MKKL+K RF+PPNYEQTLY+QYQNC Q  R  A+YIEEFHR   RTNL E E+H I+ F+ GLRFD+KEKVKLQ FQ LSEA+++AETV+EM   R K+ 
Subjt:  MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNL

Query:  SQKAPWEATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------S
        ++K PWE + +K+    N      ++     EK VE Q+ ++ KK+      K +N Y RP  G C+ CGQ                             
Subjt:  SQKAPWEATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------S

Query:  NLEEEAELIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTI--------------------------NRWVERHLDPYKIGWVKKGGETMINEIC
          +EE E+IEAD+GD +SC++QRVL++PKEE   QRHSLFKTRCTI                          N   + H  PYKIGW+KKGGET+I+EIC
Subjt:  NLEEEAELIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTI--------------------------NRWVERHLDPYKIGWVKKGGETMINEIC

Query:  AVPLSIGNGYKDQIACDEGHGNM-----------TLKPYLRG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLII
         VPLSIGN YKDQ+ CD    ++            ++   RG E   EF WM+K+V+LLPL K+  +    ++  G+    +  +   ++   ++L +++
Subjt:  AVPLSIGNGYKDQIACDEGHGNM-----------TLKPYLRG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLII

Query:  VDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
               + E +   +++LF ++P + KEP  LPPL +I H I+L+ GAS P+LPHY MSP EY+ILHD IE+L
Subjt:  VDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

A0A5D3DIC3 RNA-directed DNA polymerase-like protein5.3e-11254.61Show/hide
Query:  MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNL
        MKKLLKA FLPPNYEQTLY+QYQNC Q +R+VA+YIEEF R S  TN SENEQHQIARFI  LRFDIKEKVKLQ F+ LSEA+S AETV+EM   + K+ 
Subjt:  MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNL

Query:  SQKAPWEATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQSNLEEEAELIEADDGDRISCVIQRVLVAP
        S+K  WE +  K+  Y++K + QPSTSV  K K+VETQD           +GK    Y   S           LEEE ELIEADDG+RI CVIQR+L+  
Subjt:  SQKAPWEATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQSNLEEEAELIEADDGDRISCVIQRVLVAP

Query:  KEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDEGHGNMTLKPY
        KEET+PQ   LFKTRC IN  V                          E H +PYKIGWVKKGGET+                      EG GN TLKPY
Subjt:  KEETSPQRHSLFKTRCTINRWV--------------------------ERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDEGHGNMTLKPY

Query:  LRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQ
         RG    EF WM K++VLLPL+ KN EGT+H+K+ G   + +  +   ++  +D+L L+IVDK+  EQ E++EPKLQQL  EFPHLKKEP GLPPL +IQ
Subjt:  LRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQ

Query:  HQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
        HQIDLI GASLPNL +YRMSP EYQILH+HI+DL
Subjt:  HQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

A0A5D3E417 Transposon Ty3-I Gag-Pol polyprotein isoform X12.0e-12757.21Show/hide
Query:  PPNYEQTL---YSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWE
        P +Y Q +   YSQYQNC Q ++ VA+YIEEFHR   R NLSENEQHQIARFI GLRFDIKEKVKL SF++LSEA+S AETV+EM  +R KN +++  WE
Subjt:  PPNYEQTL---YSQYQNCCQSTRSVADYIEEFHR-SERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWE

Query:  ATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------SNLEEEAE
           +K+  Y  K   QPSTS+  K K ++ Q+    KKKE++ RGKTQNNYTRPSLGKCF CG+                               EEE E
Subjt:  ATLTKRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQ----------------------------SNLEEEAE

Query:  LIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWVERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDE--------------G
        LIEADDGDRISC++QRVL+ PKEET+PQ HSLFKTRCTIN  V  H DPYKIGWVKKGGET+INEIC +PLSIGN YKDQI CD                
Subjt:  LIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRWVERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDE--------------G

Query:  HGNMTLKPYLRG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEP
        H   TL    RG E   EF WM K+V+LLPL KKN E  R  K+       +  ++  K+  +DLL L++ DKS+    E+VEP+L++LF EFPHLKKEP
Subjt:  HGNMTLKPYLRG-EKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLRLIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEP

Query:  MGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL
         GLPPL +IQHQIDL+P ASLPNLPHYRMSP+EYQ+LHDHIEDL
Subjt:  MGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGTTACTAAAGGCACGATTCCTACCACCAAACTATGAACAAACACTATATAGTCAATACCAAAATTGCTGCCAAAGTACACGTTCAGTAGCAGACTATATAGA
AGAGTTTCATCGTTCAGAAAGAACAAATTTAAGTGAGAATGAGCAACATCAAATTGCAAGATTTATACGAGGCCTTCGATTTGATATTAAAGAAAAGGTAAAGCTACAAT
CATTTCAACTCTTATCTGAAGCCGTCTCTTTTGCAGAGACAGTAAAAGAAATGAATGCCATTCGAACCAAGAATTTAAGCCAGAAGGCACCATGGGAGGCAACCTTAACT
AAAAGACCGAAGTACTCCAACAAGGCAACTAATCAACCTTCAACATCAGTACAAGGAAAAGAAAAAGAGGTTGAGACACAAGACTTAGCCAATGAAAAAAAGAAAGAAGC
AGTAAACAGAGGCAAGACTCAGAATAACTACACTCGACCATCCCTAGGCAAATGTTTTCCATGCGGCCAATCTAATCTGGAAGAAGAAGCTGAATTAATTGAAGCAGATG
ATGGAGATAGAATCTCTTGTGTCATACAAAGAGTACTCGTTGCCCCAAAGGAAGAAACAAGTCCGCAGCGCCACAGTTTATTCAAGACAAGGTGCACAATAAATAGGTGG
GTTGAACGTCACCTGGATCCCTACAAGATAGGTTGGGTAAAGAAAGGAGGAGAAACCATGATCAATGAAATTTGTGCAGTTCCTCTTTCCATTGGAAACGGGTATAAAGA
TCAGATTGCTTGTGATGAAGGCCATGGCAACATGACACTCAAACCTTACCTAAGAGGAGAGAAAATACCTGAGTTTTGTTGGATGAGCAAGAGGGTAGTCCTACTCCCTC
TAACAAAGAAAAATGGTGAAGGAACAAGACACCATAAGTCTAATGGCAATTACTCATCACAGTTAGTGGCAAGAAGCTGCTCAAAGAAAGGGAACAAGGATCTCCTAAGG
CTGATTATTGTTGATAAGTCCAAAGAGGAACAACTTGAGGTTGTAGAACCTAAGTTGCAGCAGTTATTTGATGAGTTCCCACACTTGAAGAAAGAACCCATGGGACTTCC
ACCTCTCCACAACATACAGCATCAAATAGATCTTATACCAGGAGCATCTTTACCAAATTTACCCCATTATAGAATGAGTCCTCAAGAATACCAAATCCTCCATGATCATA
TTGAAGATTTAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGTTACTAAAGGCACGATTCCTACCACCAAACTATGAACAAACACTATATAGTCAATACCAAAATTGCTGCCAAAGTACACGTTCAGTAGCAGACTATATAGA
AGAGTTTCATCGTTCAGAAAGAACAAATTTAAGTGAGAATGAGCAACATCAAATTGCAAGATTTATACGAGGCCTTCGATTTGATATTAAAGAAAAGGTAAAGCTACAAT
CATTTCAACTCTTATCTGAAGCCGTCTCTTTTGCAGAGACAGTAAAAGAAATGAATGCCATTCGAACCAAGAATTTAAGCCAGAAGGCACCATGGGAGGCAACCTTAACT
AAAAGACCGAAGTACTCCAACAAGGCAACTAATCAACCTTCAACATCAGTACAAGGAAAAGAAAAAGAGGTTGAGACACAAGACTTAGCCAATGAAAAAAAGAAAGAAGC
AGTAAACAGAGGCAAGACTCAGAATAACTACACTCGACCATCCCTAGGCAAATGTTTTCCATGCGGCCAATCTAATCTGGAAGAAGAAGCTGAATTAATTGAAGCAGATG
ATGGAGATAGAATCTCTTGTGTCATACAAAGAGTACTCGTTGCCCCAAAGGAAGAAACAAGTCCGCAGCGCCACAGTTTATTCAAGACAAGGTGCACAATAAATAGGTGG
GTTGAACGTCACCTGGATCCCTACAAGATAGGTTGGGTAAAGAAAGGAGGAGAAACCATGATCAATGAAATTTGTGCAGTTCCTCTTTCCATTGGAAACGGGTATAAAGA
TCAGATTGCTTGTGATGAAGGCCATGGCAACATGACACTCAAACCTTACCTAAGAGGAGAGAAAATACCTGAGTTTTGTTGGATGAGCAAGAGGGTAGTCCTACTCCCTC
TAACAAAGAAAAATGGTGAAGGAACAAGACACCATAAGTCTAATGGCAATTACTCATCACAGTTAGTGGCAAGAAGCTGCTCAAAGAAAGGGAACAAGGATCTCCTAAGG
CTGATTATTGTTGATAAGTCCAAAGAGGAACAACTTGAGGTTGTAGAACCTAAGTTGCAGCAGTTATTTGATGAGTTCCCACACTTGAAGAAAGAACCCATGGGACTTCC
ACCTCTCCACAACATACAGCATCAAATAGATCTTATACCAGGAGCATCTTTACCAAATTTACCCCATTATAGAATGAGTCCTCAAGAATACCAAATCCTCCATGATCATA
TTGAAGATTTAAAATAA
Protein sequenceShow/hide protein sequence
MKKLLKARFLPPNYEQTLYSQYQNCCQSTRSVADYIEEFHRSERTNLSENEQHQIARFIRGLRFDIKEKVKLQSFQLLSEAVSFAETVKEMNAIRTKNLSQKAPWEATLT
KRPKYSNKATNQPSTSVQGKEKEVETQDLANEKKKEAVNRGKTQNNYTRPSLGKCFPCGQSNLEEEAELIEADDGDRISCVIQRVLVAPKEETSPQRHSLFKTRCTINRW
VERHLDPYKIGWVKKGGETMINEICAVPLSIGNGYKDQIACDEGHGNMTLKPYLRGEKIPEFCWMSKRVVLLPLTKKNGEGTRHHKSNGNYSSQLVARSCSKKGNKDLLR
LIIVDKSKEEQLEVVEPKLQQLFDEFPHLKKEPMGLPPLHNIQHQIDLIPGASLPNLPHYRMSPQEYQILHDHIEDLK