; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G32320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G32320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDisease resistance protein RGA2-like
Genome locationChr1:27121217..27121624
RNA-Seq ExpressionCSPI01G32320
SyntenyCSPI01G32320
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ARA91516.1 CNL-I [Cucumis melo]1.8e-5583.7Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQLHDLFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

ARA91522.1 CNL-I [Cucumis melo]5.9e-5482.22Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQL +LFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

ARA91525.1 CNL-I [Cucumis melo]1.8e-5583.7Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQLHDLFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

TYK10208.1 putative disease resistance protein RGA4 [Cucumis melo var. makuwa]1.8e-5583.7Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQLHDLFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

XP_008450703.1 PREDICTED: putative disease resistance protein RGA4 [Cucumis melo]1.8e-5583.7Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQLHDLFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

TrEMBL top hitse value%identityAlignment
A0A1S3BPS1 putative disease resistance protein RGA48.9e-5683.7Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQLHDLFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

A0A5D3CG57 Putative disease resistance protein RGA48.9e-5683.7Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQLHDLFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

A0A678NU61 CNL-I8.9e-5683.7Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQLHDLFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

A0A678PED4 CNL-I2.9e-5482.22Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQL +LFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

A0A678Q5Q6 CNL-I8.9e-5683.7Show/hide
Query:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL
        M TTNIIVG DSSSS   SLSSL IWDMDFEFLQLHDLFSNMTHLKSL +GNCKNIKMSSS DG+IWK LGSLRRLDL SI ELE LPKGLQYVTTL+CL
Subjt:  MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCL

Query:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP
        KL+ CRNLVS+EGI+HLTSLSLLEI++CPNL SYP
Subjt:  KLHGCRNLVSLEGIKHLTSLSLLEIDHCPNLTSYP

SwissProt top hitse value%identityAlignment
Q7XA39 Putative disease resistance protein RGA48.1e-0634.15Show/hide
Query:  SSSSAIISLSSLRIWDMDFEFLQL-HDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLP-KGLQYVTTLQCLKLHGCRNLV
        SS S + +L+SLRI   ++    L  ++F+++T+L+ L+  + KN+K    D       L +L+RL + S   LE  P +GL+ +T+L  L +  C+ L 
Subjt:  SSSSAIISLSSLRIWDMDFEFLQL-HDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLP-KGLQYVTTLQCLKLHGCRNLV

Query:  SL-EGIKHLTSLSLLEIDHCPNL
         L EG++HLT+L+ L +  CP +
Subjt:  SL-EGIKHLTSLSLLEIDHCPNL

Q7XA40 Putative disease resistance protein RGA34.8e-0633.61Show/hide
Query:  SSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLP-KGLQYVTTLQCLKLHGCRNLVS
        SS S + +L+SL+I+        L ++F N+ +L  L+V   +N+K   +        L +L+ LD+     LE LP +GL+ +++L  L +  C  L  
Subjt:  SSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLP-KGLQYVTTLQCLKLHGCRNLVS

Query:  L-EGIKHLTSLSLLEIDHCPNL
        L EG++HLT+L+ L+I  CP L
Subjt:  L-EGIKHLTSLSLLEIDHCPNL

Q7XBQ9 Disease resistance protein RGA21.6e-0633.33Show/hide
Query:  SSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLP-KGLQYVTTLQCLKLHGCRNLVSL-
        SS + +L+SLRI           ++F N+ +LK L +  C N+K   +        L +L+ L +     LE LP +GL+ +++L  L +  C  L  L 
Subjt:  SSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLP-KGLQYVTTLQCLKLHGCRNLVSL-

Query:  EGIKHLTSLSLLEIDHCPNL
        EG++HLT+L+ L+I  CP L
Subjt:  EGIKHLTSLSLLEIDHCPNL

Arabidopsis top hitse value%identityAlignment
AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative1.1e-0537.31Show/hide
Query:  LGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSL-EGIKHLTSLSLLEIDHCPNLTSYP
        L  L +LD+     L  LP  L ++ +L+ L L GCR L +L + +++LTSL  LE+  C N+  +P
Subjt:  LGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSL-EGIKHLTSLSLLEIDHCPNLTSYP

AT5G47280.1 ADR1-like 37.8e-0433.82Show/hide
Query:  GLGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSLE-GIKHLTSLSLLEIDHCPNLTSYP
        G+ SL  + + +   ++ LPK +  +  LQ L+L+ C  L SL   I  L  L  ++I HC +L+S P
Subjt:  GLGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSLE-GIKHLTSLSLLEIDHCPNLTSYP

AT5G51630.1 Disease resistance protein (TIR-NBS-LRR class) family2.4e-0531.76Show/hide
Query:  NIKMSSSDDGMIWKG---LGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSL-EGIKHLTSLSLLEIDHCPNLTSYP
        N++M+ S    +W+G   LGSL+++DL     L+ +P  L Y   L+ + L  C++LV+L   +++L  L +L +  C N+   P
Subjt:  NIKMSSSDDGMIWKG---LGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSL-EGIKHLTSLSLLEIDHCPNLTSYP

AT5G51630.2 Disease resistance protein (TIR-NBS-LRR class) family2.4e-0531.76Show/hide
Query:  NIKMSSSDDGMIWKG---LGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSL-EGIKHLTSLSLLEIDHCPNLTSYP
        N++M+ S    +W+G   LGSL+++DL     L+ +P  L Y   L+ + L  C++LV+L   +++L  L +L +  C N+   P
Subjt:  NIKMSSSDDGMIWKG---LGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSL-EGIKHLTSLSLLEIDHCPNLTSYP

AT5G51630.3 Disease resistance protein (TIR-NBS-LRR class) family2.4e-0531.76Show/hide
Query:  NIKMSSSDDGMIWKG---LGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSL-EGIKHLTSLSLLEIDHCPNLTSYP
        N++M+ S    +W+G   LGSL+++DL     L+ +P  L Y   L+ + L  C++LV+L   +++L  L +L +  C N+   P
Subjt:  NIKMSSSDDGMIWKG---LGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVSL-EGIKHLTSLSLLEIDHCPNLTSYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTACAAACATTATTGTTGGACATGATTCTTCTTCTTCAGCTATCATATCATTATCTTCTCTAAGAATTTGGGACATGGATTTTGAGTTCTTACAATTACATGA
CTTATTCTCCAATATGACACATCTTAAGTCTCTTGCCGTAGGAAATTGCAAGAATATAAAAATGTCTTCTTCTGATGATGGTATGATATGGAAAGGACTTGGAAGTCTTC
GTAGACTTGATTTGTATAGCATCCTTGAATTGGAATATTTGCCAAAGGGTTTGCAATATGTGACAACTCTTCAATGTTTGAAACTACATGGTTGTCGAAATTTGGTGTCG
CTTGAAGGGATTAAGCATCTCACTTCACTATCACTATTGGAAATTGATCATTGTCCTAATTTAACTTCCTACCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTACAAACATTATTGTTGGACATGATTCTTCTTCTTCAGCTATCATATCATTATCTTCTCTAAGAATTTGGGACATGGATTTTGAGTTCTTACAATTACATGA
CTTATTCTCCAATATGACACATCTTAAGTCTCTTGCCGTAGGAAATTGCAAGAATATAAAAATGTCTTCTTCTGATGATGGTATGATATGGAAAGGACTTGGAAGTCTTC
GTAGACTTGATTTGTATAGCATCCTTGAATTGGAATATTTGCCAAAGGGTTTGCAATATGTGACAACTCTTCAATGTTTGAAACTACATGGTTGTCGAAATTTGGTGTCG
CTTGAAGGGATTAAGCATCTCACTTCACTATCACTATTGGAAATTGATCATTGTCCTAATTTAACTTCCTACCCTTAA
Protein sequenceShow/hide protein sequence
MTTTNIIVGHDSSSSAIISLSSLRIWDMDFEFLQLHDLFSNMTHLKSLAVGNCKNIKMSSSDDGMIWKGLGSLRRLDLYSILELEYLPKGLQYVTTLQCLKLHGCRNLVS
LEGIKHLTSLSLLEIDHCPNLTSYP