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CSPI01G32440 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G32440
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibonuclease P
Genome locationChr1:27266634..27267071
RNA-Seq ExpressionCSPI01G32440
SyntenyCSPI01G32440
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
InterPro domainsIPR031595 - Protein-only RNase P, C-terminal
IPR033495 - Mitochondrial ribonuclease P catalytic subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19841.1 proteinaceous RNase P 1 [Cucumis melo var. makuwa]4.7e-3881.25Show/hide
Query:  GEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        G  I  WLEKHGPFDAVIDGANVG+ N+  F+FIQLKRAVY+MRELSPSKKMPLIILH RR+T+GPAR PNNMKLIE WKNCGALYATPY+ NDDW
Subjt:  GEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

XP_004142562.1 proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucumis sativus]8.6e-48100Show/hide
Query:  QGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        QGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
Subjt:  QGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

XP_008443714.1 PREDICTED: LOW QUALITY PROTEIN: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucumis melo]1.4e-3784.44Show/hide
Query:  WLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        WLEKHGPFDAVIDGANVG+ N+  F+FIQLKRAVY+MRELSPSKKMPLIILH RR+T+GPAR PNNMKLIE WKNCGALYATPY+ NDDW
Subjt:  WLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

XP_022159384.1 proteinaceous RNase P 1, chloroplastic/mitochondrial-like, partial [Momordica charantia]9.6e-3980Show/hide
Query:  EIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        EIIQ WLEKHGPFDAVIDGANVGL N+ QF+FIQLKR VYQMR++SPSK+MPLIILH+ R+T GPA+NPNN KLIETWK CGALYATP   NDDW
Subjt:  EIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

XP_022960768.1 proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucurbita moschata]1.5e-3667.59Show/hide
Query:  LICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYAT
        L C R++   F     Q WLE+HGPFDAVIDGANVGL+N+  F+FIQLKR VYQMR+LSP+K+MPLIILH+ R+T GPA NPNN +LIE+WK+CGALYAT
Subjt:  LICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYAT

Query:  PYSVNDDW
        P+  NDDW
Subjt:  PYSVNDDW

TrEMBL top hitse value%identityAlignment
A0A0A0M056 PRORP domain-containing protein3.4e-5899.08Show/hide
Query:  MLICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYA
        MLICVRK FDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYA
Subjt:  MLICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYA

Query:  TPYSVNDDW
        TPYSVNDDW
Subjt:  TPYSVNDDW

A0A1S3B8R1 Ribonuclease P6.7e-3884.44Show/hide
Query:  WLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        WLEKHGPFDAVIDGANVG+ N+  F+FIQLKRAVY+MRELSPSKKMPLIILH RR+T+GPAR PNNMKLIE WKNCGALYATPY+ NDDW
Subjt:  WLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

A0A5D3D8D9 Proteinaceous RNase P 12.3e-3881.25Show/hide
Query:  GEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        G  I  WLEKHGPFDAVIDGANVG+ N+  F+FIQLKRAVY+MRELSPSKKMPLIILH RR+T+GPAR PNNMKLIE WKNCGALYATPY+ NDDW
Subjt:  GEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

A0A6J1E290 Ribonuclease P4.6e-3980Show/hide
Query:  EIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        EIIQ WLEKHGPFDAVIDGANVGL N+ QF+FIQLKR VYQMR++SPSK+MPLIILH+ R+T GPA+NPNN KLIETWK CGALYATP   NDDW
Subjt:  EIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

A0A6J1JJ38 Ribonuclease P7.4e-3767.59Show/hide
Query:  LICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYAT
        L C R++   F     Q WLE+HGPFDAVIDGANVGL+N+  F+FIQLKR VYQMR+LSP+K+MPLIILH+ R+T GPA NPNN +LIE+WK+CGALYAT
Subjt:  LICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYAT

Query:  PYSVNDDW
        P+  NDDW
Subjt:  PYSVNDDW

SwissProt top hitse value%identityAlignment
F4JKB6 Proteinaceous RNase P 38.7e-1946.88Show/hide
Query:  QGWLEKHGPFDAVIDGANVGLVNER----QFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        Q WLEKHG ++A++DGAN+GL  +      F+  QL+  V ++   S SKK PLI+LHK+R+ +    NPN+  L+E W N   LYATP   NDDW
Subjt:  QGWLEKHGPFDAVIDGANVGLVNER----QFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

Q66GI4 Proteinaceous RNase P 1, chloroplastic/mitochondrial1.5e-3157.41Show/hide
Query:  LICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYAT
        L C R++   F     Q WLE+HGPFDAVIDGAN+GLVN+R F+F QL   V + +++SPSK++PL+ILHK R+  GPA  P N  L+E WKN GALYAT
Subjt:  LICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYAT

Query:  PYSVNDDW
        P   NDDW
Subjt:  PYSVNDDW

Q680B9 Proteinaceous RNase P 22.8e-1743.75Show/hide
Query:  QGWLEKHGPFDAVIDGANVGLVNER----QFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        Q WLEKHG ++A++DGAN+GL  +      F+  QL+  + ++   S + K PLI+LHKRR+      NP +  L+E W + G LYATP   NDDW
Subjt:  QGWLEKHGPFDAVIDGANVGLVNER----QFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

Arabidopsis top hitse value%identityAlignment
AT2G16650.1 proteinaceous RNase P 22.0e-1843.75Show/hide
Query:  QGWLEKHGPFDAVIDGANVGLVNER----QFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        Q WLEKHG ++A++DGAN+GL  +      F+  QL+  + ++   S + K PLI+LHKRR+      NP +  L+E W + G LYATP   NDDW
Subjt:  QGWLEKHGPFDAVIDGANVGLVNER----QFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

AT2G32230.1 proteinaceous RNase P 11.1e-3257.41Show/hide
Query:  LICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYAT
        L C R++   F     Q WLE+HGPFDAVIDGAN+GLVN+R F+F QL   V + +++SPSK++PL+ILHK R+  GPA  P N  L+E WKN GALYAT
Subjt:  LICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYAT

Query:  PYSVNDDW
        P   NDDW
Subjt:  PYSVNDDW

AT4G21900.1 proteinaceous RNase P 36.2e-2046.88Show/hide
Query:  QGWLEKHGPFDAVIDGANVGLVNER----QFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW
        Q WLEKHG ++A++DGAN+GL  +      F+  QL+  V ++   S SKK PLI+LHK+R+ +    NPN+  L+E W N   LYATP   NDDW
Subjt:  QGWLEKHGPFDAVIDGANVGLVNER----QFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW

AT5G60430.1 drug transmembrane transporters;antiporters2.8e-0456.67Show/hide
Query:  QGWLEKHGPFDAVIDGANVGLVNERQFNFI
        Q WLEKHG ++A++DGAN+GL    Q NF+
Subjt:  QGWLEKHGPFDAVIDGANVGLVNERQFNFI

AT5G60430.2 drug transmembrane transporters;antiporters2.8e-0456.67Show/hide
Query:  QGWLEKHGPFDAVIDGANVGLVNERQFNFI
        Q WLEKHG ++A++DGAN+GL    Q NF+
Subjt:  QGWLEKHGPFDAVIDGANVGLVNERQFNFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATTTGTGTTAGGAAAATTTTTGACTGGTTTGAAGGTGAAATAATTCAGGGGTGGCTTGAAAAGCATGGTCCTTTTGATGCTGTAATTGATGGTGCCAATGTTGG
TCTAGTAAATGAACGTCAGTTCAACTTCATCCAGCTCAAAAGGGCTGTATATCAAATGCGTGAACTGAGCCCTTCAAAAAAGATGCCACTCATAATTTTGCATAAAAGAC
GCATCACTGACGGTCCTGCACGGAATCCTAATAATATGAAATTAATAGAGACATGGAAAAATTGTGGTGCACTCTATGCTACTCCTTATTCGGTCAATGATGATTGG
mRNA sequenceShow/hide mRNA sequence
ATGTTAATTTGTGTTAGGAAAATTTTTGACTGGTTTGAAGGTGAAATAATTCAGGGGTGGCTTGAAAAGCATGGTCCTTTTGATGCTGTAATTGATGGTGCCAATGTTGG
TCTAGTAAATGAACGTCAGTTCAACTTCATCCAGCTCAAAAGGGCTGTATATCAAATGCGTGAACTGAGCCCTTCAAAAAAGATGCCACTCATAATTTTGCATAAAAGAC
GCATCACTGACGGTCCTGCACGGAATCCTAATAATATGAAATTAATAGAGACATGGAAAAATTGTGGTGCACTCTATGCTACTCCTTATTCGGTCAATGATGATTGG
Protein sequenceShow/hide protein sequence
MLICVRKIFDWFEGEIIQGWLEKHGPFDAVIDGANVGLVNERQFNFIQLKRAVYQMRELSPSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDW