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CSPI01G32950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G32950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrotransposon protein
Genome locationChr1:27855868..27856691
RNA-Seq ExpressionCSPI01G32950
SyntenyCSPI01G32950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063789.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-6167.38Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS
        MASTNSKAT K++WTT IEDE LVECLLQLVEE  WRA N T K GYL  V      K++   Y+RFGWNEERKCI+ EKS+FDDWVK H NARGLLNK+
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS

Query:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYS
        F YFYDL++V GRDR    RCKTPV+M  Q  KD E+DD+ INLEDFDIP PHGL+ PS ++++ TPTSM  DAGSSR SKK RSYS
Subjt:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYS

TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]8.7e-6360.08Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKL----LEATYN------------------------RFGWNEE
        MASTNSKAT K+RWTT I+D+ LVECLLQLVEE  WRA N T K  YLV+VQKLMKEK+    ++ T N                        RFGWNEE
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKL----LEATYN------------------------RFGWNEE

Query:  RKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMIL
        RKCI+ EKS+FDDWVK H NARGLLNK F+YFYDL+IV GRD+  G RCK  VEM  QT +D E+DD+ INLEDFDIP PHGLE PS +++  T  SM  
Subjt:  RKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMIL

Query:  DAGSSRQSKKMRSY----SCTFCARMRETFKEIGKIVA
        DAGSSR SKK RSY      TF A M+ET KEIGKI A
Subjt:  DAGSSRQSKKMRSY----SCTFCARMRETFKEIGKIVA

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]1.3e-6964.89Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS
        MASTNSKAT K+RWTT IEDE LVECLLQLVEE  WRA N T KLGYL +   +   +++    + FGWNE +KCI+VEK +FDDWVK H NA+GLLNK 
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS

Query:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYS----CTFCARMRE
        F YFYDL++V GRDR  G RCKTPVEM  QT +D E+DD+ INLEDFDIP PHGLE PS +++  TPTSM  DAGSSR SKK RSYS     TF A MRE
Subjt:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYS----CTFCARMRE

Query:  TFKEIGKIVAMEERKMKIESSLHKQ
        T KEIGKI   +  KM+IESSLHK+
Subjt:  TFKEIGKIVAMEERKMKIESSLHKQ

XP_008455678.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]8.7e-6360.08Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKL----LEATYN------------------------RFGWNEE
        MASTNSKAT K+RWTT I+D+ LVECLLQLVEE  WRA N T K  YLV+VQKLMKEK+    ++ T N                        RFGWNEE
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKL----LEATYN------------------------RFGWNEE

Query:  RKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMIL
        RKCI+ EKS+FDDWVK H NARGLLNK F+YFYDL+IV GRD+  G RCK  VEM  QT +D E+DD+ INLEDFDIP PHGLE PS +++  T  SM  
Subjt:  RKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMIL

Query:  DAGSSRQSKKMRSY----SCTFCARMRETFKEIGKIVA
        DAGSSR SKK RSY      TF A M+ET KEIGKI A
Subjt:  DAGSSRQSKKMRSY----SCTFCARMRETFKEIGKIVA

XP_008462939.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]3.2e-5766.48Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS
        MAST SKAT K+RWTT IEDE LVECLLQLVEE  WRA N T K GYL +   +   +++    + FGWNEERKCI+ EKS+FDDWVK H NAR LLNK 
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS

Query:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKK
        F YFYDL+IV GRD   GDRCKTPVEM  QT +D E+DD+ INLEDFDIP PHGLE PS +++  TPTSM  DAGSSR SKK
Subjt:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKK

TrEMBL top hitse value%identityAlignment
A0A0A0M0S6 Uncharacterized protein4.6e-11895.02Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS
        MASTNSKATYKYRWTTNIEDEPLVECLLQL+E+SDWRAYNWT KLGYLVKVQKL+KEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS

Query:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYSCTFCARMRETFKE
        FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKN+S TPTSMILDA S RQS+K RSYSCTFCA MRETFKE
Subjt:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYSCTFCARMRETFKE

Query:  IGKIVAMEERKMKIESSLHKQ
        IGKIVAMEERKMKIESSLHKQ
Subjt:  IGKIVAMEERKMKIESSLHKQ

A0A1S3C252 uncharacterized protein At2g29880-like4.2e-6360.08Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKL----LEATYN------------------------RFGWNEE
        MASTNSKAT K+RWTT I+D+ LVECLLQLVEE  WRA N T K  YLV+VQKLMKEK+    ++ T N                        RFGWNEE
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKL----LEATYN------------------------RFGWNEE

Query:  RKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMIL
        RKCI+ EKS+FDDWVK H NARGLLNK F+YFYDL+IV GRD+  G RCK  VEM  QT +D E+DD+ INLEDFDIP PHGLE PS +++  T  SM  
Subjt:  RKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMIL

Query:  DAGSSRQSKKMRSY----SCTFCARMRETFKEIGKIVA
        DAGSSR SKK RSY      TF A M+ET KEIGKI A
Subjt:  DAGSSRQSKKMRSY----SCTFCARMRETFKEIGKIVA

A0A5A7VE44 Retrotransposon protein3.0e-6167.38Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS
        MASTNSKAT K++WTT IEDE LVECLLQLVEE  WRA N T K GYL  V      K++   Y+RFGWNEERKCI+ EKS+FDDWVK H NARGLLNK+
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS

Query:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYS
        F YFYDL++V GRDR    RCKTPV+M  Q  KD E+DD+ INLEDFDIP PHGL+ PS ++++ TPTSM  DAGSSR SKK RSYS
Subjt:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYS

A0A5D3BC95 Retrotransposon protein4.2e-6360.08Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKL----LEATYN------------------------RFGWNEE
        MASTNSKAT K+RWTT I+D+ LVECLLQLVEE  WRA N T K  YLV+VQKLMKEK+    ++ T N                        RFGWNEE
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKL----LEATYN------------------------RFGWNEE

Query:  RKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMIL
        RKCI+ EKS+FDDWVK H NARGLLNK F+YFYDL+IV GRD+  G RCK  VEM  QT +D E+DD+ INLEDFDIP PHGLE PS +++  T  SM  
Subjt:  RKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMIL

Query:  DAGSSRQSKKMRSY----SCTFCARMRETFKEIGKIVA
        DAGSSR SKK RSY      TF A M+ET KEIGKI A
Subjt:  DAGSSRQSKKMRSY----SCTFCARMRETFKEIGKIVA

A0A5D3C7T4 Uncharacterized protein6.1e-7064.89Show/hide
Query:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS
        MASTNSKAT K+RWTT IEDE LVECLLQLVEE  WRA N T KLGYL +   +   +++    + FGWNE +KCI+VEK +FDDWVK H NA+GLLNK 
Subjt:  MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKS

Query:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYS----CTFCARMRE
        F YFYDL++V GRDR  G RCKTPVEM  QT +D E+DD+ INLEDFDIP PHGLE PS +++  TPTSM  DAGSSR SKK RSYS     TF A MRE
Subjt:  FSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYS----CTFCARMRE

Query:  TFKEIGKIVAMEERKMKIESSLHKQ
        T KEIGKI   +  KM+IESSLHK+
Subjt:  TFKEIGKIVAMEERKMKIESSLHKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02210.1 unknown protein1.1e-0425.29Show/hide
Query:  FGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVE-MDPQTT----KDIEKDDIGINLEDFD
        F W+ ER+ +  + +++ D++K H +AR  + +   Y+ DL ++ G      + C   ++  DP+T     K     D+ I+ E+ D
Subjt:  FGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVE-MDPQTT----KDIEKDDIGINLEDFD

AT4G02210.2 unknown protein1.1e-0425.29Show/hide
Query:  FGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVE-MDPQTT----KDIEKDDIGINLEDFD
        F W+ ER+ +  + +++ D++K H +AR  + +   Y+ DL ++ G      + C   ++  DP+T     K     D+ I+ E+ D
Subjt:  FGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVE-MDPQTT----KDIEKDDIGINLEDFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAACAAATTCAAAAGCCACGTATAAGTATCGGTGGACAACCAATATTGAGGATGAGCCATTAGTTGAGTGCTTACTACAACTAGTGGAGGAAAGTGACTGGAG
GGCTTATAATTGGACATTGAAACTGGGATATTTGGTCAAAGTACAAAAACTAATGAAAGAAAAACTCCTGGAAGCAACATACAATAGGTTTGGCTGGAATGAGGAACGAA
AGTGCATTAAAGTAGAGAAATCTATGTTCGATGACTGGGTTAAGGAACACCATAATGCTCGAGGCCTACTAAATAAATCATTTTCTTACTTTTATGACTTGCAAATTGTG
ATTGGTAGAGATAGGACTATTGGTGATAGATGCAAGACACCCGTTGAAATGGACCCACAAACTACAAAAGATATTGAGAAAGATGACATAGGCATTAATCTCGAAGACTT
TGATATTCCAAAACCACATGGACTCGAGTTACCATCAGTAAAAAACATATCATTCACTCCAACAAGTATGATACTTGATGCAGGATCATCTAGGCAAAGTAAGAAAATGA
GGTCATATTCATGCACATTTTGTGCAAGAATGCGAGAAACTTTCAAGGAAATTGGAAAGATTGTTGCAATGGAAGAAAGAAAAATGAAAATAGAATCATCCTTACACAAA
CAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAACAAATTCAAAAGCCACGTATAAGTATCGGTGGACAACCAATATTGAGGATGAGCCATTAGTTGAGTGCTTACTACAACTAGTGGAGGAAAGTGACTGGAG
GGCTTATAATTGGACATTGAAACTGGGATATTTGGTCAAAGTACAAAAACTAATGAAAGAAAAACTCCTGGAAGCAACATACAATAGGTTTGGCTGGAATGAGGAACGAA
AGTGCATTAAAGTAGAGAAATCTATGTTCGATGACTGGGTTAAGGAACACCATAATGCTCGAGGCCTACTAAATAAATCATTTTCTTACTTTTATGACTTGCAAATTGTG
ATTGGTAGAGATAGGACTATTGGTGATAGATGCAAGACACCCGTTGAAATGGACCCACAAACTACAAAAGATATTGAGAAAGATGACATAGGCATTAATCTCGAAGACTT
TGATATTCCAAAACCACATGGACTCGAGTTACCATCAGTAAAAAACATATCATTCACTCCAACAAGTATGATACTTGATGCAGGATCATCTAGGCAAAGTAAGAAAATGA
GGTCATATTCATGCACATTTTGTGCAAGAATGCGAGAAACTTTCAAGGAAATTGGAAAGATTGTTGCAATGGAAGAAAGAAAAATGAAAATAGAATCATCCTTACACAAA
CAATAA
Protein sequenceShow/hide protein sequence
MASTNSKATYKYRWTTNIEDEPLVECLLQLVEESDWRAYNWTLKLGYLVKVQKLMKEKLLEATYNRFGWNEERKCIKVEKSMFDDWVKEHHNARGLLNKSFSYFYDLQIV
IGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGINLEDFDIPKPHGLELPSVKNISFTPTSMILDAGSSRQSKKMRSYSCTFCARMRETFKEIGKIVAMEERKMKIESSLHK
Q