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CSPI01G33090 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G33090
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationChr1:27989364..27990160
RNA-Seq ExpressionCSPI01G33090
SyntenyCSPI01G33090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96336.1 hypothetical protein E5676_scaffold1970G00440 [Cucumis melo var. makuwa]1.5e-0966.07Show/hide
Query:  LLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSR
        LLGE+KND+RWD   S  IK VEAKEGKNGKD+IKL++++GGVKLK+KEG + L++
Subjt:  LLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSR

TYK11105.1 peptidyl-tRNA hydrolase 2 [Cucumis melo var. makuwa]2.0e-0642.86Show/hide
Query:  GILLGHQTLSKTLGALLGEVKNDERWDILVSTDI----------------------------------------KGVEAKEGKNGKDDIKLSVEEGGVKL
        G+LLGH TLS++ GALLGEVKNDERW++L S  I                                        K VEAK GK GK     SVEEG VKL
Subjt:  GILLGHQTLSKTLGALLGEVKNDERWDILVSTDI----------------------------------------KGVEAKEGKNGKDDIKLSVEEGGVKL

Query:  KRKEG
        KRK+G
Subjt:  KRKEG

TrEMBL top hitse value%identityAlignment
A0A0A0KNA2 Uncharacterized protein2.3e-0854.05Show/hide
Query:  GALLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSRELKKLDSLVNYGGKKA
        GAL+GEVKNDERW+++ S                         GVKLKRK GSD+LSRELKKLDS VN GGKKA
Subjt:  GALLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSRELKKLDSLVNYGGKKA

A0A0A0LY03 Uncharacterized protein2.7e-3395.06Show/hide
Query:  FVGILLGHQTLSKTLGALLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSRELKKLDSL
        FV  ++GHQTLSKTLGALLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSRELKKLDSL
Subjt:  FVGILLGHQTLSKTLGALLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSRELKKLDSL

A0A5D3BBR6 Uncharacterized protein7.2e-1066.07Show/hide
Query:  LLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSR
        LLGE+KND+RWD   S  IK VEAKEGKNGKD+IKL++++GGVKLK+KEG + L++
Subjt:  LLGEVKNDERWDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSR

A0A5D3CHU3 Aminoacyl-tRNA hydrolase9.7e-0742.86Show/hide
Query:  GILLGHQTLSKTLGALLGEVKNDERWDILVSTDI----------------------------------------KGVEAKEGKNGKDDIKLSVEEGGVKL
        G+LLGH TLS++ GALLGEVKNDERW++L S  I                                        K VEAK GK GK     SVEEG VKL
Subjt:  GILLGHQTLSKTLGALLGEVKNDERWDILVSTDI----------------------------------------KGVEAKEGKNGKDDIKLSVEEGGVKL

Query:  KRKEG
        KRK+G
Subjt:  KRKEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATGGTCCAAGAGAGTGTTCATTTTTGCCGGTGCCTGTCAAGAAATTTATTGAGCCAATTAAAGTGTACTTGTGAAGAGGGCTTGTCGAAGTTGGAGGTTAGTAT
CGTGAAGAAGTTGGAATCGTCTCTGGAATGCATTTTTCTTGCAGGTCAGGCAAGTGGGTTTCCTCCCAACTCCTATTTGGTGGACAGCTCGTGCGGCGGGACATATCAGA
GGCAGTGGAGGGCCCTTACCAACGACTACTTCGTGGGTATTTTATTAGGCCATCAAACCCTCTCGAAAACATTGGGTGCCTTGCTTGGTGAAGTTAAAAATGATGAGAGG
TGGGACATTTTGGTTTCAACGGATATTAAGGGAGTGGAGGCTAAAGAAGGTAAAAATGGTAAGGATGACATTAAGTTGTCTGTGGAGGAGGGAGGTGTTAAGTTGAAACG
TAAGGAGGGTAGTGACAATCTGTCTAGGGAATTAAAAAAACTGGACAGTTTGGTGAACTATGGGGGCAAGAAAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGATGGTCCAAGAGAGTGTTCATTTTTGCCGGTGCCTGTCAAGAAATTTATTGAGCCAATTAAAGTGTACTTGTGAAGAGGGCTTGTCGAAGTTGGAGGTTAGTAT
CGTGAAGAAGTTGGAATCGTCTCTGGAATGCATTTTTCTTGCAGGTCAGGCAAGTGGGTTTCCTCCCAACTCCTATTTGGTGGACAGCTCGTGCGGCGGGACATATCAGA
GGCAGTGGAGGGCCCTTACCAACGACTACTTCGTGGGTATTTTATTAGGCCATCAAACCCTCTCGAAAACATTGGGTGCCTTGCTTGGTGAAGTTAAAAATGATGAGAGG
TGGGACATTTTGGTTTCAACGGATATTAAGGGAGTGGAGGCTAAAGAAGGTAAAAATGGTAAGGATGACATTAAGTTGTCTGTGGAGGAGGGAGGTGTTAAGTTGAAACG
TAAGGAGGGTAGTGACAATCTGTCTAGGGAATTAAAAAAACTGGACAGTTTGGTGAACTATGGGGGCAAGAAAGCCTAA
Protein sequenceShow/hide protein sequence
MRMVQESVHFCRCLSRNLLSQLKCTCEEGLSKLEVSIVKKLESSLECIFLAGQASGFPPNSYLVDSSCGGTYQRQWRALTNDYFVGILLGHQTLSKTLGALLGEVKNDER
WDILVSTDIKGVEAKEGKNGKDDIKLSVEEGGVKLKRKEGSDNLSRELKKLDSLVNYGGKKA