CuGenDBv2

Gene ID	CSPI01G33120
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ATP-dependent zinc metalloprotease FtsH
Genome location	Chr1:28012042..28014414
RNA-Seq Expression	CSPI01G33120
Synteny	CSPI01G33120
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0009534 - chloroplast thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004176 - ATP-dependent peptidase activity (molecular function) GO:0004222 - metalloendopeptidase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR003959 - ATPase, AAA-type, core IPR025662 - Sigma-54 interaction domain, ATP-binding site 1 IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK21958.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 5 [Cucumis melo var. makuwa]

9.3e-45

97.98

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

XP_004142587.1 probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Cucumis sativus]

8.4e-46

100

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

XP_008443775.1 PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Cucumis melo]

9.3e-45

97.98

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

XP_022158670.1 probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Momordica charantia]

9.3e-45

97.98

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

XP_038878867.1 probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Benincasa hispida]

9.3e-45

97.98

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY88 AAA domain-containing protein

4.1e-46

100

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

A0A1S3B9K0 probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic

4.5e-45

97.98

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

A0A5D3DES8 Putative inactive ATP-dependent zinc metalloprotease FTSHI 5

4.5e-45

97.98

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

A0A6J1DWH2 probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic

4.5e-45

97.98

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

A0A6J1JID9 probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic isoform X2

2.9e-44

94.95

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLA+AIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFD+FAGVRGK+IHTKEQDHEAFINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

SwissProt top hits

e value

%identity

Alignment

A1TZE0 ATP-dependent zinc metalloprotease FtsH

7.2e-16

45.45

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVL+VG  GTGKT LA AIA EA+VP  ++ A E    ++VG  A+ VR++FQTAR  AP +IF+++ D     RG  +     + E  +NQ+L E+DG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

A9NE17 ATP-dependent zinc metalloprotease FtsH

7.2e-16

45.45

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVL+VG+ GTGKT LA A+A EA+VP  ++   +    L+VG  AS VR+LF+ A+  AP IIF+++ D     RG  +     + E  +NQLLVE+DG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

B3DV46 ATP-dependent zinc metalloprotease FtsH 1

8.5e-17

46.46

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVL+VG  GTGKT LA A+A EAKVP  ++   E    ++VG  A+ VR+LF  A+  AP I+F+++ D     RG  I     +HE  +NQLLVE+DG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

F4J3N2 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic

1.3e-44

90.91

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEA+VPVV V+AQELE GLWVGQSA+NVRELFQTARDLAPVIIFVEDFDLFAGVRGKF+HTK+QDHE+FINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

Q6LUJ8 ATP-dependent zinc metalloprotease FtsH

7.2e-16

44.44

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        G+L+VG  GTGKT LA AIA EAKVP  T+   +    ++VG  AS VR++F+ A+  AP IIF+++ D     RG  +     + E  +NQ+LVE+DG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

Arabidopsis top hits

e value

%identity

Alignment

AT1G06430.1 FTSH protease 8

2.5e-16

46.46

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVL+VG  GTGKT LA AIA EA VP  ++   E    ++VG  AS VR+LF+ A++ AP I+FV++ D     RG  I     + E  +NQLL E+DG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

AT2G30950.1 FtsH extracellular protease family

3.3e-16

45.45

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVL++G  GTGKT LA AIA EA VP  ++   E    ++VG  AS VR+LF+ A++ AP I+FV++ D     RG  I     + E  +NQLL E+DG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

AT3G04340.1 FtsH extracellular protease family

8.9e-46

90.91

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
        GVLIVGE GTGKTSLALAIAAEA+VPVV V+AQELE GLWVGQSA+NVRELFQTARDLAPVIIFVEDFDLFAGVRGKF+HTK+QDHE+FINQLLVELDG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

AT3G47060.1 FTSH protease 7

6.7e-17

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG
        GVL+VG  GTGKT LA A+A EA+VP ++  A E    L+VG  AS VR+LF  A+  AP IIF+++ D  A  R GKF      + E  +NQLL E+DG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG

AT5G58870.1 FTSH protease 9

1.5e-16

Show/hide

Query:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG
        GVL+VG  GTGKT LA A+A E+ VP ++  A E    L+VG  AS VR+LF  A+  AP IIF+++ D  A  R GKF      + E  +NQLL E+DG
Subjt:  GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGGTCTTAATTGTTGGTGAGAGCGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTAAAGCCCAAGAATTAGA
GCCTGGACTATGGGTTGGGCAGAGTGCATCCAATGTCCGGGAATTATTCCAAACTGCAAGAGATTTGGCACCTGTGATCATATTTGTGGAGGATTTTGACCTCTTTGCTG
GAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGCATGTGGTGTGGGAAGTTTGGACTGATAGG
AACCTTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDGHVVWEVWTDR
NL

CSPI01G33120 (gene) of Cucumber (PI 183967) v1 genome