; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G33140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G33140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationChr1:28019380..28020027
RNA-Seq ExpressionCSPI01G33140
SyntenyCSPI01G33140
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0015031 - protein transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039185.1 IST1-like protein [Cucumis melo var. makuwa]3.3e-8366.98Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        MAGT+L+RST YHP+SDGQ EVVNRG+ETY+RCFC ERPKEW +WLH AEY YNTTFQ+SLG+TPFQAVYGR+PPPL+Y+GD  + + ALD+QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        LGALKEHL+  Q+++K+SA  KRR VEY VGDMVF KIRP RQ+ L K+RNEKL+PKF GP+ ++E+IG  +Y LELP +SSIHPVFHVSQLKK+ G H+
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
        +E A+ + ++T+N+E
Subjt:  LEQADVMSFLTDNYE

KAA0050511.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.4e-7863.72Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        +AGT+LNRS++YHPQSDGQTEVVN+ VETY+RCFC E+P+EW++WLH AEY YNTT+  S+G+TPFQAVYGR+PPPLIYYGD ++ N+ LD QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        LGALKEHL++ Q+RMKK A  KRR VE+  GDMVF K+RP RQ  + KKRNEKLSPK+ GP++V+ERIG  +Y LELP  ++IHPVFHVSQLKK +G  +
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
          Q+ +  ++ +N+E
Subjt:  LEQADVMSFLTDNYE

KAA0052896.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.3e-8367.91Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        MAGT+L+RSTAYHPQSDGQTEVVNRG+ETY+RCFC ERPK+W +WLH AEY YNTTFQ+SL +TPFQAVYGR+PPPL Y+GD  + + ALD+QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        L ALKEHL+  Q++MK+SA+ KRR VEY VGDMVF KIRP RQ+ L K+RNEKL+PKF GP+K++E+IG  +Y LELP +SSIHPVFHVSQLKK+ G H+
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
        +E A+   ++T+N+E
Subjt:  LEQADVMSFLTDNYE

TYK14463.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.3e-8367.91Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        MAGT+L+RSTAYHPQSDGQTEVVNRG+ETY+RCFC ERPK+W +WLH AEY YNTTFQ+SL +TPFQAVYGR+PPPL Y+GD  + + ALD+QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        L ALKEHL+  Q++MK+SA+ KRR VEY VGDMVF KIRP RQ+ L K+RNEKL+PKF GP+K++E+IG  +Y LELP +SSIHPVFHVSQLKK+ G H+
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
        +E A+   ++T+N+E
Subjt:  LEQADVMSFLTDNYE

TYK24654.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.4e-7863.72Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        +AGT+LNRS++YHPQSDGQTEVVN+ VETY+RCFC E+P+EW++WLH AEY YNTT+  S+G+TPFQAVYGR+PPPLIYYGD ++ N+ LD QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        LGALKEHL++ Q+RMKK A  KRR VE+  GDMVF K+RP RQ  + KKRNEKLSPK+ GP++V+ERIG  +Y LELP  ++IHPVFHVSQLKK +G  +
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
          Q+ +  ++ +N+E
Subjt:  LEQADVMSFLTDNYE

TrEMBL top hitse value%identityAlignment
A0A5A7UFA3 Ty3/gypsy retrotransposon protein3.6e-8367.91Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        MAGT+L+RSTAYHPQSDGQTEVVNRG+ETY+RCFC ERPK+W +WLH AEY YNTTFQ+SL +TPFQAVYGR+PPPL Y+GD  + + ALD+QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        L ALKEHL+  Q++MK+SA+ KRR VEY VGDMVF KIRP RQ+ L K+RNEKL+PKF GP+K++E+IG  +Y LELP +SSIHPVFHVSQLKK+ G H+
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
        +E A+   ++T+N+E
Subjt:  LEQADVMSFLTDNYE

A0A5D3C5N7 Ty3/gypsy retrotransposon protein1.2e-7863.72Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        +AGT+LNRS++YHPQSDGQTEVVN+ VETY+RCFC E+P+EW++WLH AEY YNTT+  S+G+TPFQAVYGR+PPPLIYYGD ++ N+ LD QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        LGALKEHL++ Q+RMKK A  KRR VE+  GDMVF K+RP RQ  + KKRNEKLSPK+ GP++V+ERIG  +Y LELP  ++IHPVFHVSQLKK +G  +
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
          Q+ +  ++ +N+E
Subjt:  LEQADVMSFLTDNYE

A0A5D3CRH2 Ty3/gypsy retrotransposon protein3.6e-8367.91Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        MAGT+L+RSTAYHPQSDGQTEVVNRG+ETY+RCFC ERPK+W +WLH AEY YNTTFQ+SL +TPFQAVYGR+PPPL Y+GD  + + ALD+QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        L ALKEHL+  Q++MK+SA+ KRR VEY VGDMVF KIRP RQ+ L K+RNEKL+PKF GP+K++E+IG  +Y LELP +SSIHPVFHVSQLKK+ G H+
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
        +E A+   ++T+N+E
Subjt:  LEQADVMSFLTDNYE

A0A5D3D4I0 IST1-like protein1.6e-8366.98Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        MAGT+L+RST YHP+SDGQ EVVNRG+ETY+RCFC ERPKEW +WLH AEY YNTTFQ+SLG+TPFQAVYGR+PPPL+Y+GD  + + ALD+QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        LGALKEHL+  Q+++K+SA  KRR VEY VGDMVF KIRP RQ+ L K+RNEKL+PKF GP+ ++E+IG  +Y LELP +SSIHPVFHVSQLKK+ G H+
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
        +E A+ + ++T+N+E
Subjt:  LEQADVMSFLTDNYE

A0A5D3DM31 Ty3/gypsy retrotransposon protein1.2e-7863.72Show/hide
Query:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA
        +AGT+LNRS++YHPQSDGQTEVVN+ VETY+RCFC E+P+EW++WLH AEY YNTT+  S+G+TPFQAVYGR+PPPLIYYGD ++ N+ LD QLK RD  
Subjt:  MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEA

Query:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK
        LGALKEHL++ Q+RMKK A  KRR VE+  GDMVF K+RP RQ  + KKRNEKLSPK+ GP++V+ERIG  +Y LELP  ++IHPVFHVSQLKK +G  +
Subjt:  LGALKEHLRMGQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHK

Query:  LEQADVMSFLTDNYE
          Q+ +  ++ +N+E
Subjt:  LEQADVMSFLTDNYE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.3e-2132.51Show/hide
Query:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE
        S  Y PQ+DGQTE  N+ VE  +RC CS  P  W   +   +  YN     +  +TPF+ V+   P   PL    +  S +   D+  +   +    +KE
Subjt:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE

Query:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ
        HL     +MKK   +K + + E+  GD+V  K R     L    ++ KL+P F GPF V+++ G  +Y L+LP +        FHVS L+K   N +L  
Subjt:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ

Query:  ADV
        A +
Subjt:  ADV

P0CT35 Transposon Tf2-2 polyprotein8.3e-2132.51Show/hide
Query:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE
        S  Y PQ+DGQTE  N+ VE  +RC CS  P  W   +   +  YN     +  +TPF+ V+   P   PL    +  S +   D+  +   +    +KE
Subjt:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE

Query:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ
        HL     +MKK   +K + + E+  GD+V  K R     L    ++ KL+P F GPF V+++ G  +Y L+LP +        FHVS L+K   N +L  
Subjt:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ

Query:  ADV
        A +
Subjt:  ADV

P0CT36 Transposon Tf2-3 polyprotein8.3e-2132.51Show/hide
Query:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE
        S  Y PQ+DGQTE  N+ VE  +RC CS  P  W   +   +  YN     +  +TPF+ V+   P   PL    +  S +   D+  +   +    +KE
Subjt:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE

Query:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ
        HL     +MKK   +K + + E+  GD+V  K R     L    ++ KL+P F GPF V+++ G  +Y L+LP +        FHVS L+K   N +L  
Subjt:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ

Query:  ADV
        A +
Subjt:  ADV

P0CT41 Transposon Tf2-12 polyprotein8.3e-2132.51Show/hide
Query:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE
        S  Y PQ+DGQTE  N+ VE  +RC CS  P  W   +   +  YN     +  +TPF+ V+   P   PL    +  S +   D+  +   +    +KE
Subjt:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE

Query:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ
        HL     +MKK   +K + + E+  GD+V  K R     L    ++ KL+P F GPF V+++ G  +Y L+LP +        FHVS L+K   N +L  
Subjt:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ

Query:  ADV
        A +
Subjt:  ADV

Q9UR07 Transposon Tf2-11 polyprotein8.3e-2132.51Show/hide
Query:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE
        S  Y PQ+DGQTE  N+ VE  +RC CS  P  W   +   +  YN     +  +TPF+ V+   P   PL    +  S +   D+  +   +    +KE
Subjt:  STAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMP--PPLIYYGDHKSSNAALDDQLKARDEALGALKE

Query:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ
        HL     +MKK   +K + + E+  GD+V  K R     L    ++ KL+P F GPF V+++ G  +Y L+LP +        FHVS L+K   N +L  
Subjt:  HLRMGQDRMKKSAHLK-RRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTT--SSIHPVFHVSQLKKVIGNHKLEQ

Query:  ADV
        A +
Subjt:  ADV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTACCCGATTGAATCGAAGCACAGCTTATCACCCGCAGTCGGATGGCCAAACTGAGGTGGTGAACAGAGGAGTTGAAACTTATATGAGGTGTTTTTGTAGTGA
ACGACCGAAGGAATGGACAAGGTGGTTGCATTGTGCAGAGTATTTGTACAATACAACGTTCCAGAAATCGTTAGGGGTTACCCCTTTTCAAGCAGTGTACGGCCGGATGC
CCCCTCCATTAATATACTATGGTGATCATAAGAGTTCGAATGCAGCACTGGATGATCAGTTAAAGGCACGAGATGAAGCTTTGGGAGCATTAAAAGAGCATCTAAGAATG
GGTCAGGACAGAATGAAGAAGAGTGCTCATTTGAAACGAAGAGTCGTGGAGTATGCTGTGGGAGATATGGTATTTTTTAAAATTAGACCATCTAGACAGATATTACTGCC
GAAGAAACGAAATGAGAAGTTATCTCCAAAATTTCTTGGCCCCTTTAAAGTAGTAGAACGGATTGGATTGGCATCCTACACATTGGAATTGCCTACAACATCATCCATCC
ATCCAGTTTTTCATGTGTCGCAGCTGAAAAAAGTGATAGGTAATCACAAGTTGGAGCAGGCTGATGTGATGTCGTTTTTGACTGACAACTACGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGTACCCGATTGAATCGAAGCACAGCTTATCACCCGCAGTCGGATGGCCAAACTGAGGTGGTGAACAGAGGAGTTGAAACTTATATGAGGTGTTTTTGTAGTGA
ACGACCGAAGGAATGGACAAGGTGGTTGCATTGTGCAGAGTATTTGTACAATACAACGTTCCAGAAATCGTTAGGGGTTACCCCTTTTCAAGCAGTGTACGGCCGGATGC
CCCCTCCATTAATATACTATGGTGATCATAAGAGTTCGAATGCAGCACTGGATGATCAGTTAAAGGCACGAGATGAAGCTTTGGGAGCATTAAAAGAGCATCTAAGAATG
GGTCAGGACAGAATGAAGAAGAGTGCTCATTTGAAACGAAGAGTCGTGGAGTATGCTGTGGGAGATATGGTATTTTTTAAAATTAGACCATCTAGACAGATATTACTGCC
GAAGAAACGAAATGAGAAGTTATCTCCAAAATTTCTTGGCCCCTTTAAAGTAGTAGAACGGATTGGATTGGCATCCTACACATTGGAATTGCCTACAACATCATCCATCC
ATCCAGTTTTTCATGTGTCGCAGCTGAAAAAAGTGATAGGTAATCACAAGTTGGAGCAGGCTGATGTGATGTCGTTTTTGACTGACAACTACGAATAG
Protein sequenceShow/hide protein sequence
MAGTRLNRSTAYHPQSDGQTEVVNRGVETYMRCFCSERPKEWTRWLHCAEYLYNTTFQKSLGVTPFQAVYGRMPPPLIYYGDHKSSNAALDDQLKARDEALGALKEHLRM
GQDRMKKSAHLKRRVVEYAVGDMVFFKIRPSRQILLPKKRNEKLSPKFLGPFKVVERIGLASYTLELPTTSSIHPVFHVSQLKKVIGNHKLEQADVMSFLTDNYE