; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G33160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G33160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationChr1:28029370..28030220
RNA-Seq ExpressionCSPI01G33160
SyntenyCSPI01G33160
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637561.1 hypothetical protein CSA_017659 [Cucumis sativus]2.6e-7055.16Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        M+HPFTAKQVA  FI+++VS HG+PKSI+SDRD++FIS+FW ELFA MGT LKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  IT-------RPFML---PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKS
         T        PF +    Q P    +GT            K    +    K  L    NR KK  +TKRRELKFKVGDEVYLKLRPY QRSLARKR +K 
Subjt:  IT-------RPFML---PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKS

Query:  APKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
        APKFYGPY I+EEIGEV YRL+LPP+AS+HDVFHISQLKLKLGKQ VVQ QQP+L  DFELQL PE +L IRWN +LGAN+
Subjt:  APKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

KAE8637598.1 hypothetical protein CSA_022681 [Cucumis sativus]5.8e-7052.67Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        ++HP+TAKQVA +F+++VVS HGIPKSII+DRDKIF+SNFWKELF  MGTILKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  ITRPFMLPQDPIPSRFGTN--------------------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKS
         T        P  S FG                       K    +    +  L    NR KKM +  RRELKFK+GDEVYLKLRPYRQRSLARK+ +K 
Subjt:  ITRPFMLPQDPIPSRFGTN--------------------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKS

Query:  APKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
        +PKFYGPY+++EEIGEV YRLQLPP+A++H+VFH+SQLKLKLGKQ V Q QQP+L EDFELQL PE +L IRWN ELG N+
Subjt:  APKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

KGN62557.2 hypothetical protein Csa_018739 [Cucumis sativus]6.4e-7759.07Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        MRHPF A+QVAEVFIDRVVS HGIPKSIISDRDKIFISNFWKE+FA+MGT+LKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  IT-------RPFMLPQDPIPS---RFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKS
         T        PF +     P     +G +           K    +    K  L    NR KKM ++KRRELKFKVGDEVYLKLRPYRQ SLARKRS+K 
Subjt:  IT-------RPFMLPQDPIPS---RFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKS

Query:  APKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
        APKFYGPY+I+EEIGEV YRLQLPP+AS+HDVFHISQLKLKLGK  VVQIQQPVL E+FELQL+PET+L IRWN +LGAN+
Subjt:  APKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

TYK15071.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.1e-6854.61Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        M+HPF+AKQVA  FID++V  HGIPKSIISDRDKIF+SNFWKELF  M TILKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK
                T PF      P  P+ S +G             K    +    K  L    NR KK  ++KRRELKFKVGDEVYLKLRPYRQRSLARKR++K
Subjt:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK

Query:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
         APK+YGPY+I+E IGEV YRL LPP+AS+H+VFHISQLKLKLG Q  VQIQQP L  +FELQL PET+L IRW+ ELGAN+
Subjt:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

TYK28944.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-6754.61Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        M+HPF+AKQVA  FID++V  HGIPKSIISDRDKIF+SNFWKELF  M TILKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK
                T PF      P  P+ S +G             K    +    K  L    NR KK  ++KRRELKFKVGDEVYLKLRPYRQRSLARKR++K
Subjt:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK

Query:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
         APK+YGPY+I E IGEV YRL LPP+AS+H+VFHISQLKLKLG Q  VQIQQP L  +FELQL PET+L IRW+ ELGAN+
Subjt:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

TrEMBL top hitse value%identityAlignment
A0A5D3BBH7 Ty3/gypsy retrotransposon protein7.6e-6854.61Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        M+HPF+AKQVA  FID++V  HGIPKSIISDRDKIF+SNFWKELF  M TILKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK
                T PF      P  P+ S +G             K    +    K  L    NR KK  ++KRRELKFKVGDEVYLKLRPYRQRSLARKR++K
Subjt:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK

Query:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
         APK+YGPY+I E IGEV YRL LPP+AS+H+VFHISQLKLKLG Q  VQIQQP L  +FELQL PET+L IRW+ ELGAN+
Subjt:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

A0A5D3C0R9 Rotamase7.6e-6853.02Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        ++HPF+AKQVA  FID+VV  H IPKSIISDRDKIF+SNFWKELFA MGTILKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  ITRPFMLPQDPIPSRFGTN--------------------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKS
         T        P  + FG +                     K    +    K  L+   N  KKM + KR ELK KVG+EVYLKLRPYRQ SLARKRS+K 
Subjt:  ITRPFMLPQDPIPSRFGTN--------------------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKS

Query:  APKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
        AP+FYGPYKI+EEIG V YRL+LPP+A++H+VFHISQLK KLG QQVVQ Q P+L E+FELQL PET+L IRWN  LGAN+
Subjt:  APKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

A0A5D3CT96 Ty3/gypsy retrotransposon protein3.4e-6854.61Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        M+HPF+AKQVA  FID++V  HGIPKSIISDRDKIF+SNFWKELF  M TILKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK
                T PF      P  P+ S +G             K    +    K  L    NR KK  ++KRRELKFKVGDEVYLKLRPYRQRSLARKR++K
Subjt:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK

Query:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
         APK+YGPY+I+E IGEV YRL LPP+AS+H+VFHISQLKLKLG Q  VQIQQP L  +FELQL PET+L IRW+ ELGAN+
Subjt:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

A0A5D3DZK6 Ty3/gypsy retrotransposon protein7.6e-6854.61Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        M+HPF+AKQVA  FID++V  HGIPKSIISDRDKIF+SNFWKELF  M TILKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK
                T PF      P  P+ S +G             K    +    K  L    NR KK  ++KRRELKFKVGDEVYLKLRPYRQRSLARKR++K
Subjt:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK

Query:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
         APK+YGPY+I E IGEV YRL LPP+AS+H+VFHISQLKLKLG Q  VQIQQP L  +FELQL PET+L IRW+ ELGAN+
Subjt:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

A0A5D3E325 Ty3/gypsy retrotransposon protein7.6e-6854.61Show/hide
Query:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG
        M+HPF+AKQVA  FID++V  HGIPKSIISDRDKIF+SNFWKELF  M TILKRS  FHPQTD                                E+ Y 
Subjt:  MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD--------------------------------EVNYG

Query:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK
                T PF      P  P+ S +G             K    +    K  L    NR KK  ++KRRELKFKVGDEVYLKLRPYRQRSLARKR++K
Subjt:  I-------TRPFML----PQDPIPSRFGTN----------AKREGFSPECSKGKLEHCANRRKKMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDK

Query:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND
         APK+YGPY+I E IGEV YRL LPP+AS+H+VFHISQLKLKLG Q  VQIQQP L  +FELQL PET+L IRW+ ELGAN+
Subjt:  SAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIRWNTELGAND

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein5.0e-0826.38Show/hide
Query:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT
        TA+Q A +F  RV++  G PK II+D D IF S  WK+       ++K S+ + PQTD      N  +         T P        L Q    +   +
Subjt:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT

Query:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG
          +   F      SP  S  +L   +++               K+ +NT   ++K            F+ GD V +K    R ++    +S+K AP F G
Subjt:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG

Query:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK
        P+ ++++ G   Y L LP   K      FH+S L+
Subjt:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK

P0CT35 Transposon Tf2-2 polyprotein5.0e-0826.38Show/hide
Query:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT
        TA+Q A +F  RV++  G PK II+D D IF S  WK+       ++K S+ + PQTD      N  +         T P        L Q    +   +
Subjt:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT

Query:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG
          +   F      SP  S  +L   +++               K+ +NT   ++K            F+ GD V +K    R ++    +S+K AP F G
Subjt:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG

Query:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK
        P+ ++++ G   Y L LP   K      FH+S L+
Subjt:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK

P0CT36 Transposon Tf2-3 polyprotein5.0e-0826.38Show/hide
Query:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT
        TA+Q A +F  RV++  G PK II+D D IF S  WK+       ++K S+ + PQTD      N  +         T P        L Q    +   +
Subjt:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT

Query:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG
          +   F      SP  S  +L   +++               K+ +NT   ++K            F+ GD V +K    R ++    +S+K AP F G
Subjt:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG

Query:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK
        P+ ++++ G   Y L LP   K      FH+S L+
Subjt:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK

P0CT41 Transposon Tf2-12 polyprotein5.0e-0826.38Show/hide
Query:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT
        TA+Q A +F  RV++  G PK II+D D IF S  WK+       ++K S+ + PQTD      N  +         T P        L Q    +   +
Subjt:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT

Query:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG
          +   F      SP  S  +L   +++               K+ +NT   ++K            F+ GD V +K    R ++    +S+K AP F G
Subjt:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG

Query:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK
        P+ ++++ G   Y L LP   K      FH+S L+
Subjt:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK

Q9UR07 Transposon Tf2-11 polyprotein5.0e-0826.38Show/hide
Query:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT
        TA+Q A +F  RV++  G PK II+D D IF S  WK+       ++K S+ + PQTD      N  +         T P        L Q    +   +
Subjt:  TAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTD----EVNYGI---------TRP------FMLPQDPIPSRFGT

Query:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG
          +   F      SP  S  +L   +++               K+ +NT   ++K            F+ GD V +K    R ++    +S+K AP F G
Subjt:  NAKREGF------SPECSKGKLEHCANRR--------------KKMVNTKRRELK------------FKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYG

Query:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK
        P+ ++++ G   Y L LP   K      FH+S L+
Subjt:  PYKIVEEIGEVVYRLQLPP--KASVHDVFHISQLK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACACCCCTTTACTGCCAAGCAAGTGGCCGAAGTGTTTATTGACAGGGTAGTGAGTACACATGGAATACCCAAGTCAATCATATCCGACAGAGACAAAATTTTCAT
TAGCAATTTTTGGAAAGAACTATTTGCTAACATGGGGACAATCCTAAAAAGAAGTATGATGTTTCACCCACAAACGGATGAAGTGAATTATGGTATAACACGACCTTTCA
TGCTTCCACAAGATCCAATCCCTTCCAGATTTGGAACAAATGCTAAAAGAGAGGGATTTAGCCCTGAATGCTCTAAAGGAAAACTTGAACATTGCGCAAACCGAAGGAAG
AAAATGGTCAACACAAAAAGGAGAGAGCTTAAGTTCAAGGTGGGAGATGAGGTATATCTCAAGCTTCGACCATATAGGCAACGTTCGTTAGCACGGAAGAGATCTGACAA
GTCGGCTCCTAAATTCTATGGACCATATAAGATCGTTGAGGAAATTGGGGAAGTGGTGTATAGACTACAATTACCTCCCAAAGCCTCTGTTCATGATGTCTTCCACATTT
CCCAACTTAAATTGAAATTGGGGAAACAGCAAGTGGTGCAAATCCAACAACCAGTCCTGCCAGAAGACTTTGAACTACAATTAAGACCAGAGACTATGCTGAGGATCCGT
TGGAATACTGAACTAGGGGCCAATGAC
mRNA sequenceShow/hide mRNA sequence
ATGAGACACCCCTTTACTGCCAAGCAAGTGGCCGAAGTGTTTATTGACAGGGTAGTGAGTACACATGGAATACCCAAGTCAATCATATCCGACAGAGACAAAATTTTCAT
TAGCAATTTTTGGAAAGAACTATTTGCTAACATGGGGACAATCCTAAAAAGAAGTATGATGTTTCACCCACAAACGGATGAAGTGAATTATGGTATAACACGACCTTTCA
TGCTTCCACAAGATCCAATCCCTTCCAGATTTGGAACAAATGCTAAAAGAGAGGGATTTAGCCCTGAATGCTCTAAAGGAAAACTTGAACATTGCGCAAACCGAAGGAAG
AAAATGGTCAACACAAAAAGGAGAGAGCTTAAGTTCAAGGTGGGAGATGAGGTATATCTCAAGCTTCGACCATATAGGCAACGTTCGTTAGCACGGAAGAGATCTGACAA
GTCGGCTCCTAAATTCTATGGACCATATAAGATCGTTGAGGAAATTGGGGAAGTGGTGTATAGACTACAATTACCTCCCAAAGCCTCTGTTCATGATGTCTTCCACATTT
CCCAACTTAAATTGAAATTGGGGAAACAGCAAGTGGTGCAAATCCAACAACCAGTCCTGCCAGAAGACTTTGAACTACAATTAAGACCAGAGACTATGCTGAGGATCCGT
TGGAATACTGAACTAGGGGCCAATGAC
Protein sequenceShow/hide protein sequence
MRHPFTAKQVAEVFIDRVVSTHGIPKSIISDRDKIFISNFWKELFANMGTILKRSMMFHPQTDEVNYGITRPFMLPQDPIPSRFGTNAKREGFSPECSKGKLEHCANRRK
KMVNTKRRELKFKVGDEVYLKLRPYRQRSLARKRSDKSAPKFYGPYKIVEEIGEVVYRLQLPPKASVHDVFHISQLKLKLGKQQVVQIQQPVLPEDFELQLRPETMLRIR
WNTELGAND