; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G33290 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G33290
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:28165887..28166528
RNA-Seq ExpressionCSPI01G33290
SyntenyCSPI01G33290
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66759.1 hypothetical protein Csa_007054 [Cucumis sativus]2.5e-7498.62Show/hide
Query:  MGKSIKDFTKNLIHSSVFAIFSAAITKFIIPTDTKIEKKFGPKKVWDSFGLKLFIPFTATTRPTPQFPPSSRRPASGKPRCHQQQQELSAALLTIVPSSV
        MGK IKDFTKNLIHSSVFAIFSAAITKFIIPTDTKIEKKFGPKKVWDSFGLKLFIPFTATTRPTPQFPPSSRRPASGKPRCHQQQQELSAALLTIVPSSV
Subjt:  MGKSIKDFTKNLIHSSVFAIFSAAITKFIIPTDTKIEKKFGPKKVWDSFGLKLFIPFTATTRPTPQFPPSSRRPASGKPRCHQQQQELSAALLTIVPSSV

Query:  TLRRLVARHSNFRPRSLRPSVGFLRVIFSYIWRWNFSLPIIFLAP
        TLRRLVARHSNFRPRS RPSVGFLRVIFSYIWRWNFSLPIIFLAP
Subjt:  TLRRLVARHSNFRPRSLRPSVGFLRVIFSYIWRWNFSLPIIFLAP
TrEMBL top hitse value%identityAlignment
A0A0A0M0D4 Uncharacterized protein1.2e-7498.62Show/hide
Query:  MGKSIKDFTKNLIHSSVFAIFSAAITKFIIPTDTKIEKKFGPKKVWDSFGLKLFIPFTATTRPTPQFPPSSRRPASGKPRCHQQQQELSAALLTIVPSSV
        MGK IKDFTKNLIHSSVFAIFSAAITKFIIPTDTKIEKKFGPKKVWDSFGLKLFIPFTATTRPTPQFPPSSRRPASGKPRCHQQQQELSAALLTIVPSSV
Subjt:  MGKSIKDFTKNLIHSSVFAIFSAAITKFIIPTDTKIEKKFGPKKVWDSFGLKLFIPFTATTRPTPQFPPSSRRPASGKPRCHQQQQELSAALLTIVPSSV

Query:  TLRRLVARHSNFRPRSLRPSVGFLRVIFSYIWRWNFSLPIIFLAP
        TLRRLVARHSNFRPRS RPSVGFLRVIFSYIWRWNFSLPIIFLAP
Subjt:  TLRRLVARHSNFRPRSLRPSVGFLRVIFSYIWRWNFSLPIIFLAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAATCTATTAAAGATTTTACTAAAAATCTTATTCACTCCTCGGTTTTTGCTATATTTTCTGCCGCCATCACCAAATTTATCATTCCCACGGACACTAAAATTGA
GAAGAAATTTGGGCCTAAAAAAGTGTGGGATTCATTTGGGCTGAAGTTATTTATACCTTTCACTGCAACTACTAGGCCCACGCCACAGTTTCCACCCAGCAGTCGCCGGC
CAGCTTCCGGCAAACCACGCTGCCACCAACAGCAGCAAGAACTCAGCGCCGCTCTGCTGACCATCGTTCCGTCATCCGTGACACTCCGACGACTAGTCGCTCGCCACTCC
AACTTCCGGCCTCGGTCGCTCAGGCCATCTGTGGGCTTTCTTAGGGTGATTTTTTCTTACATTTGGCGCTGGAATTTTTCGTTACCCATTATATTTCTGGCCCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAATCTATTAAAGATTTTACTAAAAATCTTATTCACTCCTCGGTTTTTGCTATATTTTCTGCCGCCATCACCAAATTTATCATTCCCACGGACACTAAAATTGA
GAAGAAATTTGGGCCTAAAAAAGTGTGGGATTCATTTGGGCTGAAGTTATTTATACCTTTCACTGCAACTACTAGGCCCACGCCACAGTTTCCACCCAGCAGTCGCCGGC
CAGCTTCCGGCAAACCACGCTGCCACCAACAGCAGCAAGAACTCAGCGCCGCTCTGCTGACCATCGTTCCGTCATCCGTGACACTCCGACGACTAGTCGCTCGCCACTCC
AACTTCCGGCCTCGGTCGCTCAGGCCATCTGTGGGCTTTCTTAGGGTGATTTTTTCTTACATTTGGCGCTGGAATTTTTCGTTACCCATTATATTTCTGGCCCCGTAACT
GATTGCCCACTATGTGTTGTCCAGTTGTTTTAGTATTGAGTTTTATTTGGTGAATTTTTGGTGAGAAATGCGG
Protein sequenceShow/hide protein sequence
MGKSIKDFTKNLIHSSVFAIFSAAITKFIIPTDTKIEKKFGPKKVWDSFGLKLFIPFTATTRPTPQFPPSSRRPASGKPRCHQQQQELSAALLTIVPSSVTLRRLVARHS
NFRPRSLRPSVGFLRVIFSYIWRWNFSLPIIFLAP