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CSPI01G33370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G33370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionBeta_elim_lyase domain-containing protein
Genome locationChr1:28278467..28282236
RNA-Seq ExpressionCSPI01G33370
SyntenyCSPI01G33370
Gene Ontology termsGO:0006520 - cellular amino acid metabolic process (biological process)
GO:0016829 - lyase activity (molecular function)
InterPro domainsIPR001597 - Aromatic amino acid beta-eliminating lyase/threonine aldolase
IPR015422 - Pyridoxal phosphate-dependent transferase, small domain
IPR015424 - Pyridoxal phosphate-dependent transferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453666.1 PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X1 [Cucumis melo]1.4e-5490.91Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIGILCAAGLVAIKENVQKLEADH+KAKQLASGL+QIKGLK+DPKSVETNII FEIEDDYGISMETLCK+LEERGIF+ML++QTRARIV HHQISTSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTLNGIKVVNGN
        VQY LSCF+QTLNGIKVVNGN
Subjt:  VQYILSCFQQTLNGIKVVNGN

XP_008453667.1 PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X2 [Cucumis melo]1.4e-5490.91Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIGILCAAGLVAIKENVQKLEADH+KAKQLASGL+QIKGLK+DPKSVETNII FEIEDDYGISMETLCK+LEERGIF+ML++QTRARIV HHQISTSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTLNGIKVVNGN
        VQY LSCF+QTLNGIKVVNGN
Subjt:  VQYILSCFQQTLNGIKVVNGN

XP_011660269.1 probable low-specificity L-threonine aldolase 1 isoform X2 [Cucumis sativus]3.2e-59100Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTLNGIKVVNGN
        VQYILSCFQQTLNGIKVVNGN
Subjt:  VQYILSCFQQTLNGIKVVNGN

XP_031736719.1 probable low-specificity L-threonine aldolase 1 isoform X1 [Cucumis sativus]3.0e-5795.28Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNI------ILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHH
        MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNI      ILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHH
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNI------ILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHH

Query:  QISTSDVQYILSCFQQTLNGIKVVNGN
        QISTSDVQYILSCFQQTLNGIKVVNGN
Subjt:  QISTSDVQYILSCFQQTLNGIKVVNGN

XP_038877077.1 probable low-specificity L-threonine aldolase 1 [Benincasa hispida]1.3e-5290.08Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIGILCAAGLVA+KENV KLEADH KAKQLASGL QIKGLKIDPKSVETNII FEIEDDYGISMETLCKSLEERGIF+ML++Q RARIV HHQISTSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTLNGIKVVNGN
        VQY LSCFQQTLNGIKV NGN
Subjt:  VQYILSCFQQTLNGIKVVNGN

TrEMBL top hitse value%identityAlignment
A0A0A0M3F6 Beta_elim_lyase domain-containing protein1.5e-59100Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTLNGIKVVNGN
        VQYILSCFQQTLNGIKVVNGN
Subjt:  VQYILSCFQQTLNGIKVVNGN

A0A1S3BWA2 probable low-specificity L-threonine aldolase 1 isoform X26.7e-5590.91Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIGILCAAGLVAIKENVQKLEADH+KAKQLASGL+QIKGLK+DPKSVETNII FEIEDDYGISMETLCK+LEERGIF+ML++QTRARIV HHQISTSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTLNGIKVVNGN
        VQY LSCF+QTLNGIKVVNGN
Subjt:  VQYILSCFQQTLNGIKVVNGN

A0A1S3BXZ8 probable low-specificity L-threonine aldolase 1 isoform X16.7e-5590.91Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIGILCAAGLVAIKENVQKLEADH+KAKQLASGL+QIKGLK+DPKSVETNII FEIEDDYGISMETLCK+LEERGIF+ML++QTRARIV HHQISTSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTLNGIKVVNGN
        VQY LSCF+QTLNGIKVVNGN
Subjt:  VQYILSCFQQTLNGIKVVNGN

A0A6J1DWI0 probable low-specificity L-threonine aldolase 15.9e-4377.05Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIED-DYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTS
        MRQIGILC+A LVAIKEN+ KLE DH KAK LASGL +I GLK+DPKSVETNII FE+ED DY IS+ETLCKSLEERGIF+M ++ TRARIV HHQIS S
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIED-DYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTS

Query:  DVQYILSCFQQTLNGIKVVNGN
        DV Y LSCFQQTL+GI+V NGN
Subjt:  DVQYILSCFQQTLNGIKVVNGN

A0A6J1EZ04 probable low-specificity L-threonine aldolase 15.0e-4274.38Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIGILCAA L+AIKENV KL  DH  AK LASGL QI G+K+DPKSVETNII FE+E+D  IS+ETLCKSLEERGIF+ML  +TRAR+V HHQISTSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTLNGIKVVNGN
        V+Y LSCFQQTL+GI   +GN
Subjt:  VQYILSCFQQTLNGIKVVNGN

SwissProt top hitse value%identityAlignment
O07051 L-allo-threonine aldolase9.8e-1133.04Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQ GIL  AGL A++++V +L  DH++A+QLA GL  + G+++D   V+TN++  ++       +    K+   RGI  +       R+V H QI   D
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTL
        ++ ++  F + L
Subjt:  VQYILSCFQQTL

Q8RXU4 Probable low-specificity L-threonine aldolase 12.1e-2956.25Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIG+LCAA LVA++EN+ KL+ DHKKAK LA GL Q+KG++++  +VETN+I  ++ED   ++ E L K+LEE GI ++    +R RIV HHQI+TSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTL
        V Y LSCFQQ +
Subjt:  VQYILSCFQQTL

Q9FPH3 Probable low-specificity L-threonine aldolase 22.6e-2756.36Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIG+LCAA LVA+ ENV KLE DHKKA+ LA GL +I+ L+++  +VETNII  +I +D     E  CKSLE+ G+ V+ Q   R RIV HHQIS  D
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQ
        V+Y+LSCF++
Subjt:  VQYILSCFQQ

Arabidopsis top hitse value%identityAlignment
AT1G08630.1 threonine aldolase 11.5e-3056.25Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIG+LCAA LVA++EN+ KL+ DHKKAK LA GL Q+KG++++  +VETN+I  ++ED   ++ E L K+LEE GI ++    +R RIV HHQI+TSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTL
        V Y LSCFQQ +
Subjt:  VQYILSCFQQTL

AT1G08630.2 threonine aldolase 11.5e-3056.25Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIG+LCAA LVA++EN+ KL+ DHKKAK LA GL Q+KG++++  +VETN+I  ++ED   ++ E L K+LEE GI ++    +R RIV HHQI+TSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTL
        V Y LSCFQQ +
Subjt:  VQYILSCFQQTL

AT1G08630.3 threonine aldolase 11.5e-3056.25Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIG+LCAA LVA++EN+ KL+ DHKKAK LA GL Q+KG++++  +VETN+I  ++ED   ++ E L K+LEE GI ++    +R RIV HHQI+TSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTL
        V Y LSCFQQ +
Subjt:  VQYILSCFQQTL

AT1G08630.4 threonine aldolase 11.5e-3056.25Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIG+LCAA LVA++EN+ KL+ DHKKAK LA GL Q+KG++++  +VETN+I  ++ED   ++ E L K+LEE GI ++    +R RIV HHQI+TSD
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQTL
        V Y LSCFQQ +
Subjt:  VQYILSCFQQTL

AT3G04520.1 threonine aldolase 21.8e-2856.36Show/hide
Query:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD
        MRQIG+LCAA LVA+ ENV KLE DHKKA+ LA GL +I+ L+++  +VETNII  +I +D     E  CKSLE+ G+ V+ Q   R RIV HHQIS  D
Subjt:  MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSD

Query:  VQYILSCFQQ
        V+Y+LSCF++
Subjt:  VQYILSCFQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAAATTGGGATCCTTTGTGCAGCTGGACTTGTTGCTATCAAAGAGAATGTTCAAAAACTTGAAGCTGATCATAAGAAGGCTAAGCAACTAGCTAGTGGGTTATT
CCAAATCAAAGGATTAAAGATTGATCCAAAATCAGTTGAGACAAACATTATATTGTTTGAAATAGAAGACGATTACGGAATCTCAATGGAAACATTATGTAAAAGCTTGG
AAGAACGTGGCATTTTTGTGATGCTACAAACCCAAACAAGGGCTAGAATTGTTTTTCATCATCAAATTTCAACGAGTGATGTGCAGTATATTTTATCTTGCTTTCAGCAA
ACTCTAAATGGAATTAAAGTTGTAAATGGCAACTAA
mRNA sequenceShow/hide mRNA sequence
CCTTTATTATGCAAATTTTGTGTTGAAATGGTGTGTTTAATATATAATAGGCAAGAAGGGTTAGAAAAACATTGGGTGGAGGAATGAGGCAAATTGGGATCCTTTGTGCA
GCTGGACTTGTTGCTATCAAAGAGAATGTTCAAAAACTTGAAGCTGATCATAAGAAGGCTAAGCAACTAGCTAGTGGGTTATTCCAAATCAAAGGATTAAAGATTGATCC
AAAATCAGTTGAGACAAACATTATATTGTTTGAAATAGAAGACGATTACGGAATCTCAATGGAAACATTATGTAAAAGCTTGGAAGAACGTGGCATTTTTGTGATGCTAC
AAACCCAAACAAGGGCTAGAATTGTTTTTCATCATCAAATTTCAACGAGTGATGTGCAGTATATTTTATCTTGCTTTCAGCAAACTCTAAATGGAATTAAAGTTGTAAAT
GGCAACTAATTGATCTCATAAGTAACTGTTTCTCTCTCTCCCTAATAAACAAAGTGGAAGTTACCCACTTTGGCATATATGCTTAATACGCCATTTTCTTTGTTGTATAA
AACATTTCTAATCTCTATATTGGGCTATAGTATATCATATTCTCCATTTCTCTTTTCTTGAGTGAGG
Protein sequenceShow/hide protein sequence
MRQIGILCAAGLVAIKENVQKLEADHKKAKQLASGLFQIKGLKIDPKSVETNIILFEIEDDYGISMETLCKSLEERGIFVMLQTQTRARIVFHHQISTSDVQYILSCFQQ
TLNGIKVVNGN