; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G33430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G33430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA helicase
Genome locationChr1:28346630..28349668
RNA-Seq ExpressionCSPI01G33430
SyntenyCSPI01G33430
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR012541 - DBP10, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046078.1 putative DEAD-box ATP-dependent RNA helicase 29 [Cucumis melo var. makuwa]1.8e-12893.77Show/hide
Query:  GPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL
        G +QWVDVMKRKRAIHEEVIN+VHQQ+FAKHVEE+LPLENISPKDKQKKGPR LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL
Subjt:  GPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL

Query:  DLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ
        DLVADDSSGMQKNKSVYHWDKR KKYVKLNNGDRVTASGKIKTESGAKVKAN+TGIYKKWKERSHNKISLKGISNGEHDGDA NTGGNQ+FSGNKRRFGQ
Subjt:  DLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ

Query:  GKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        GKNKHSVPNAHVRPEVKNL+QIRKERQKKA+K+QHMKNN+P RGKKSGKRGS RKAK
Subjt:  GKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

TYK09445.1 putative DEAD-box ATP-dependent RNA helicase 29 [Cucumis melo var. makuwa]6.3e-12994.16Show/hide
Query:  GPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL
        G +QWVDVMKRKRAIHEEVIN+VHQQ+FAKHVEE+LPLENISPKDKQKKGPR LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL
Subjt:  GPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL

Query:  DLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ
        DLVADDSSGMQKNKSVYHWDKR KKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDA NTGGNQ+FSGNKRRFGQ
Subjt:  DLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ

Query:  GKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        GKNKHSVPNAHVRPEVKNL+QIRKERQKKA+K+QHMKNN+P RGKKSGKRGS RKAK
Subjt:  GKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

XP_011660272.1 putative DEAD-box ATP-dependent RNA helicase 29 [Cucumis sativus]1.8e-13699.22Show/hide
Query:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
        QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPR LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
Subjt:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV

Query:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
        LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
Subjt:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG

Query:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        QG+NKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
Subjt:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

XP_016901387.1 PREDICTED: LOW QUALITY PROTEIN: putative DEAD-box ATP-dependent RNA helicase 29 [Cucumis melo]4.8e-12993.8Show/hide
Query:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
        QG +QWVDVMKRKRAIHEEVIN+VHQQ+FAKHVEE+LPLENISPKDKQKKGPR LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
Subjt:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV

Query:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
        LDLVADDSSGMQKNKSVYHWDKR KKYVKLNNGDRVTASGKIKTESGAKVKAN+TGIYKKWKERSHNKISLKGISNGEHDGDA NTGGNQ+FSGNKRRFG
Subjt:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG

Query:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        QGKNKHSVPNAHVRPEVKNL+QIRKERQKKA+K+QHMKNN+P RGKKSGKRGS RKAK
Subjt:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

XP_038904137.1 putative DEAD-box ATP-dependent RNA helicase 29 [Benincasa hispida]2.3e-12389.15Show/hide
Query:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
        QGP+QWVD+MKRKRA+HEEVINLVHQQ+ AKHVEEELPLENIS KDK+KKGP+ LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
Subjt:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV

Query:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
        LDLVADDSSGMQK+KSVYHWDKR KKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKE+SHNKISLKGIS GEHDGD++NT GNQR  GNKR+FG
Subjt:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG

Query:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        QGKN+HSVPNAHVRPEVKNL+QIRKERQKKA+K+QHMKNN+P RGKKSGKRG++ KAK
Subjt:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

TrEMBL top hitse value%identityAlignment
A0A0A0M3G2 RNA helicase8.9e-13799.22Show/hide
Query:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
        QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPR LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
Subjt:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV

Query:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
        LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
Subjt:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG

Query:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        QG+NKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
Subjt:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

A0A1S4DZG9 RNA helicase2.3e-12993.8Show/hide
Query:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
        QG +QWVDVMKRKRAIHEEVIN+VHQQ+FAKHVEE+LPLENISPKDKQKKGPR LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
Subjt:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV

Query:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
        LDLVADDSSGMQKNKSVYHWDKR KKYVKLNNGDRVTASGKIKTESGAKVKAN+TGIYKKWKERSHNKISLKGISNGEHDGDA NTGGNQ+FSGNKRRFG
Subjt:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG

Query:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        QGKNKHSVPNAHVRPEVKNL+QIRKERQKKA+K+QHMKNN+P RGKKSGKRGS RKAK
Subjt:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

A0A5A7TT78 RNA helicase8.9e-12993.77Show/hide
Query:  GPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL
        G +QWVDVMKRKRAIHEEVIN+VHQQ+FAKHVEE+LPLENISPKDKQKKGPR LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL
Subjt:  GPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL

Query:  DLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ
        DLVADDSSGMQKNKSVYHWDKR KKYVKLNNGDRVTASGKIKTESGAKVKAN+TGIYKKWKERSHNKISLKGISNGEHDGDA NTGGNQ+FSGNKRRFGQ
Subjt:  DLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ

Query:  GKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        GKNKHSVPNAHVRPEVKNL+QIRKERQKKA+K+QHMKNN+P RGKKSGKRGS RKAK
Subjt:  GKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

A0A5D3CD49 RNA helicase3.0e-12994.16Show/hide
Query:  GPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL
        G +QWVDVMKRKRAIHEEVIN+VHQQ+FAKHVEE+LPLENISPKDKQKKGPR LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL
Subjt:  GPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVL

Query:  DLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ
        DLVADDSSGMQKNKSVYHWDKR KKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDA NTGGNQ+FSGNKRRFGQ
Subjt:  DLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ

Query:  GKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
        GKNKHSVPNAHVRPEVKNL+QIRKERQKKA+K+QHMKNN+P RGKKSGKRGS RKAK
Subjt:  GKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

A0A6J1CZZ4 RNA helicase7.8e-11787.21Show/hide
Query:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
        QGP+QW DVMKRKRAIHEEVINLVHQQ+ AKHVEEELPLENISPKDK+KKGPR LKRRKT SFKDEEFYI+SVPTNHHTEAGLTVK DQGFGSNRLD AV
Subjt:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV

Query:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
        LDLVADDSSGMQK KSVYHWDKR KKYVKLNNGDRVTASGK+KTESGAKVKANKTGIYKKWKERSHNKISLKG    E +G+AINT GNQRFSGNKR+FG
Subjt:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG

Query:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK
         GKNKHSVPNAHVRPEVKNLDQIRKERQKK +++QHMK NRP RGKKSGK+G + KAK
Subjt:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK

SwissProt top hitse value%identityAlignment
A2YV85 DEAD-box ATP-dependent RNA helicase 292.8e-5550.41Show/hide
Query:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
        +G NQW+DVMK+KR +HE +INLVHQ+    H  +E  +ENIS  +++        +RK  SF+DEE+YI+SVP N H EAGL+V+ ++GF  NRLD AV
Subjt:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV

Query:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
        LDLV D++SGMQ  K+ YHW K   K+VKLN+GDRVTA+GKIKTESGAK+K  KTGIYKKW++++H  I       G  +  A  TG +QR  GN++   
Subjt:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG

Query:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGK
         G+ +  +PNA V  E++N +QI+K RQ+KA  +  MKN   K  K
Subjt:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGK

A3BT52 DEAD-box ATP-dependent RNA helicase 293.7e-5550.41Show/hide
Query:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV
        +G NQW+DVMK+KR +HE +INLVHQ+    H  +E  +ENIS  +++        +RK  SF+DEE+YI+SVP N H EAGL+V+ ++GF  NRLD AV
Subjt:  QGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAV

Query:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG
        LDLV D++SGMQ  K+ YHW K   K+VKLN+GDRVTA+GKIKTESGAK+K  KTGIYKKW++++H  I       G  +  A  TG +QR  GN++   
Subjt:  LDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFG

Query:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGK
         G+ +  +PNA V  E++N +QI+K RQ+KA  +  MKN   K  K
Subjt:  QGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGK

O49289 Putative DEAD-box ATP-dependent RNA helicase 293.3e-6455.56Show/hide
Query:  LQGP-NQWVDVMKRKRAIHEEVINLVHQQQ---FAKHVEEELPLENISPKDKQKKGPRV--LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGS
        ++GP  QWVDVMK+KRAIHEE+IN  HQQ       H+E E      S  D   +G +V   KR+   +FKD+EF+I+S+P NHH+EAGL+++G++GFGS
Subjt:  LQGP-NQWVDVMKRKRAIHEEVINLVHQQQ---FAKHVEEELPLENISPKDKQKKGPRV--LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGS

Query:  NRLDNAVLDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFS
        NRLD AVLDLVADD  G+++ +S YHWDK+ KKY+KLNNGDRVTASGKIKTESGAK  A KTGIYK+W+ERSH K+S          GDA  T    R S
Subjt:  NRLDNAVLDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFS

Query:  GNKRRFGQGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSK
        G   R G+ + + SVPNAHVR E+K+LDQ+RKERQ+KA+KV ++++ R  RG + G RG +
Subjt:  GNKRRFGQGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSK

Q09719 ATP-dependent RNA helicase dbp101.6e-0528.84Show/hide
Query:  KGPRVLKRRKTTSFKDEEFYINS-VPTNHHTEAGLTVKGDQGFGSNRLDNAVLDLVADDSSGMQKNKSVYHWDKRSKKYVK-LNNGDRVTASGK-IKTES
        K P+ L ++KTT FKD+E+Y++   P     E G  +   + F +    +A+LDL  D+    Q  K    WD + KK+V  +N+ D    S K I+ ES
Subjt:  KGPRVLKRRKTTSFKDEEFYINS-VPTNHHTEAGLTVKGDQGFGSNRLDNAVLDLVADDSSGMQKNKSVYHWDKRSKKYVK-LNNGDRVTASGK-IKTES

Query:  GAKVKAN-KTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNK-------RRFGQGKNKHSVPNAH---------VRPEVKNLDQIRKERQK
        G K+ A  ++G + +WK            + G +D        N+R+  NK        +F    +K +  N           V  E+K+  +IRK R+ 
Subjt:  GAKVKAN-KTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNK-------RRFGQGKNKHSVPNAH---------VRPEVKNLDQIRKERQK

Query:  KADKVQHMKNNRPKR
        K  ++   KNNRP +
Subjt:  KADKVQHMKNNRPKR

Q8K4L0 ATP-dependent RNA helicase DDX548.0e-1028.46Show/hide
Query:  KRKRAIHEEVINLVHQQQFAKHVEEEL--PLENISPKDKQKKGPR------VLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVLD
        +R++   E   +   Q++  +  EEE+   +E +  +   +K PR        +RR  T  +D+EFY+   P +  +E GL+V G  G    ++  AVLD
Subjt:  KRKRAIHEEVINLVHQQQFAKHVEEEL--PLENISPKDKQKKGPR------VLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVLD

Query:  LVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKAN-KTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ
        L+ D++  M + +    WD++ K++V  +  +      KIKTESG  + ++ K  +Y+KWK++   KI  +   + E +G +   G   R  G KR   Q
Subjt:  LVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKAN-KTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQ

Query:  GKNK---HSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKR
        G ++    SVP   +R E+K  +QI K+R ++A K + ++    K+     +R
Subjt:  GKNK---HSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKR

Arabidopsis top hitse value%identityAlignment
AT1G77030.1 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases2.4e-6555.56Show/hide
Query:  LQGP-NQWVDVMKRKRAIHEEVINLVHQQQ---FAKHVEEELPLENISPKDKQKKGPRV--LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGS
        ++GP  QWVDVMK+KRAIHEE+IN  HQQ       H+E E      S  D   +G +V   KR+   +FKD+EF+I+S+P NHH+EAGL+++G++GFGS
Subjt:  LQGP-NQWVDVMKRKRAIHEEVINLVHQQQ---FAKHVEEELPLENISPKDKQKKGPRV--LKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGS

Query:  NRLDNAVLDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFS
        NRLD AVLDLVADD  G+++ +S YHWDK+ KKY+KLNNGDRVTASGKIKTESGAK  A KTGIYK+W+ERSH K+S          GDA  T    R S
Subjt:  NRLDNAVLDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFS

Query:  GNKRRFGQGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSK
        G   R G+ + + SVPNAHVR E+K+LDQ+RKERQ+KA+KV ++++ R  RG + G RG +
Subjt:  GNKRRFGQGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTGTTGCAGGGTCCTAATCAATGGGTTGATGTAATGAAGAGGAAAAGAGCTATTCATGAGGAGGTCATTAACCTAGTTCATCAGCAACAGTTTGCTAAACATGT
GGAGGAGGAACTTCCACTGGAAAACATTTCTCCAAAGGATAAGCAGAAGAAAGGACCTCGAGTATTAAAAAGAAGAAAGACTACAAGTTTCAAGGACGAGGAGTTTTACA
TAAATTCAGTACCAACAAATCATCATACAGAAGCAGGGTTAACGGTGAAGGGTGATCAAGGCTTTGGGTCTAACAGGCTGGATAATGCGGTTCTGGATCTAGTAGCTGAT
GATAGTTCTGGAATGCAGAAAAATAAATCTGTATACCATTGGGACAAGAGGAGCAAGAAATATGTGAAGTTAAACAATGGGGATAGGGTCACAGCCAGTGGAAAGATAAA
GACAGAAAGCGGTGCAAAAGTAAAAGCAAACAAGACCGGCATATACAAAAAATGGAAAGAAAGATCACATAATAAGATCTCTCTCAAAGGAATTAGTAATGGAGAACACG
ATGGGGATGCCATAAACACTGGTGGTAATCAGCGATTTTCGGGAAATAAAAGAAGGTTTGGCCAGGGAAAAAACAAGCATTCAGTGCCTAATGCGCATGTGCGGCCTGAA
GTTAAAAATCTTGATCAAATTCGGAAGGAGCGACAGAAAAAGGCAGATAAAGTTCAACACATGAAGAACAACAGACCTAAGAGGGGTAAGAAATCTGGTAAAAGGGGAAG
CAAAAGAAAGGCCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATTGTTGCAGGGTCCTAATCAATGGGTTGATGTAATGAAGAGGAAAAGAGCTATTCATGAGGAGGTCATTAACCTAGTTCATCAGCAACAGTTTGCTAAACATGT
GGAGGAGGAACTTCCACTGGAAAACATTTCTCCAAAGGATAAGCAGAAGAAAGGACCTCGAGTATTAAAAAGAAGAAAGACTACAAGTTTCAAGGACGAGGAGTTTTACA
TAAATTCAGTACCAACAAATCATCATACAGAAGCAGGGTTAACGGTGAAGGGTGATCAAGGCTTTGGGTCTAACAGGCTGGATAATGCGGTTCTGGATCTAGTAGCTGAT
GATAGTTCTGGAATGCAGAAAAATAAATCTGTATACCATTGGGACAAGAGGAGCAAGAAATATGTGAAGTTAAACAATGGGGATAGGGTCACAGCCAGTGGAAAGATAAA
GACAGAAAGCGGTGCAAAAGTAAAAGCAAACAAGACCGGCATATACAAAAAATGGAAAGAAAGATCACATAATAAGATCTCTCTCAAAGGAATTAGTAATGGAGAACACG
ATGGGGATGCCATAAACACTGGTGGTAATCAGCGATTTTCGGGAAATAAAAGAAGGTTTGGCCAGGGAAAAAACAAGCATTCAGTGCCTAATGCGCATGTGCGGCCTGAA
GTTAAAAATCTTGATCAAATTCGGAAGGAGCGACAGAAAAAGGCAGATAAAGTTCAACACATGAAGAACAACAGACCTAAGAGGGGTAAGAAATCTGGTAAAAGGGGAAG
CAAAAGAAAGGCCAAG
Protein sequenceShow/hide protein sequence
MALLQGPNQWVDVMKRKRAIHEEVINLVHQQQFAKHVEEELPLENISPKDKQKKGPRVLKRRKTTSFKDEEFYINSVPTNHHTEAGLTVKGDQGFGSNRLDNAVLDLVAD
DSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQGKNKHSVPNAHVRPE
VKNLDQIRKERQKKADKVQHMKNNRPKRGKKSGKRGSKRKAK