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CSPI01G33770 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G33770
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCalcium-binding EF hand family protein
Genome locationChr1:28736841..28737296
RNA-Seq ExpressionCSPI01G33770
SyntenyCSPI01G33770
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9854184.1 hypothetical protein H0E87_005977 [Populus deltoides]7.4e-2247.62Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGF---RSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAM
        MS+A +N+TTVT F+ D K F++CVKE F+ LD D DG L+ +ELR GF    S   E    + +D L + +  +F  ++SG ID  EFK +IR+++ AM
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGF---RSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAM

Query:  AQGIGNFPLQVALQQDSFLMKAVELE
         +G GN P+ VAL+ DS LMKAVE E
Subjt:  AQGIGNFPLQVALQQDSFLMKAVELE

TYJ95513.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa]2.4e-5790.7Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMDPVDDL EVVCHKF+VEKSGGIDE EFKSV+RDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQK
        IGNFPLQVALQQDSFLMKAVELEKA+EQK
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQK

XP_004142569.1 uncharacterized protein LOC101222885 [Cucumis sativus]2.7e-6499.22Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKF VEKSGGIDEEEFKSVIRDILLAMAQG
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQK
        IGNFPLQVALQQDSFLMKAVELEKAREQK
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQK

XP_008462771.1 PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]1.4e-5791.47Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMDPVDDL EVVCHKF+VEKSGGIDE+EFKSVIRDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQK
        IGNFPLQVALQQDSFLMKAVELEKA+EQK
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQK

XP_022158640.1 uncharacterized protein LOC111025096 [Momordica charantia]4.2e-4171.88Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GFRS        DPVDDLS+ VC KF+VEKSGGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQ
        IGN PLQVALQQD  LMKAVE E+A+E+
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQ

TrEMBL top hitse value%identityAlignment
A0A0A0LYD8 Uncharacterized protein1.3e-6499.22Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKF VEKSGGIDEEEFKSVIRDILLAMAQG
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQK
        IGNFPLQVALQQDSFLMKAVELEKAREQK
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQK

A0A1S3CI80 uncharacterized protein LOC1035010586.9e-5891.47Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMDPVDDL EVVCHKF+VEKSGGIDE+EFKSVIRDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQK
        IGNFPLQVALQQDSFLMKAVELEKA+EQK
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQK

A0A5A7VAA7 Calcium-binding EF hand family protein6.9e-5891.47Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMDPVDDL EVVCHKF+VEKSGGIDE+EFKSVIRDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQK
        IGNFPLQVALQQDSFLMKAVELEKA+EQK
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQK

A0A5D3B8A7 Calcium-binding EF hand family protein1.2e-5790.7Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMDPVDDL EVVCHKF+VEKSGGIDE EFKSV+RDILLAMA G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQK
        IGNFPLQVALQQDSFLMKAVELEKA+EQK
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQK

A0A6J1DWE2 uncharacterized protein LOC1110250962.0e-4171.88Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GFRS        DPVDDLS+ VC KF+VEKSGGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQDSFLMKAVELEKAREQ
        IGN PLQVALQQD  LMKAVE E+A+E+
Subjt:  IGNFPLQVALQQDSFLMKAVELEKAREQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.8e-1031.5Show/hide
Query:  LNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRS-HPLEFELM--DPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQGIG
        +   T+  F++DTK F+    + F+ LD D +G L+ +ELR G  +   +E E+   D  D++   +  +F  +    +  + F+ +I +IL AMA+GIG
Subjt:  LNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRS-HPLEFELM--DPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQGIG

Query:  NFPLQVALQQDSFLMKAVELEKAREQK
        N P+ + +  D  +MKAV L ++++ K
Subjt:  NFPLQVALQQDSFLMKAVELEKAREQK

AT2G44310.1 Calcium-binding EF-hand family protein7.7e-1735.25Show/hide
Query:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPL-----EFELMDPVDDLSEV---VCHKFHVEKSGGIDEEEFKSVIRD
        M V  ++ +TV +F++D + F   V E F  LD + DG L+ +ELR  F S  L       +++ P D+L+ +   +  KF  ++SG +D EEF+S ++ 
Subjt:  MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPL-----EFELMDPVDDLSEV---VCHKFHVEKSGGIDEEEFKSVIRD

Query:  ILLAMAQGIGNFPLQVAL--QQDSFLMKAVELEKAREQK
        I+LA+A G+G+ P+ + L    D+FL KA +LE ++ +K
Subjt:  ILLAMAQGIGNFPLQVAL--QQDSFLMKAVELEKAREQK

AT4G38810.2 Calcium-binding EF-hand family protein1.6e-0629.2Show/hide
Query:  LNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFEL-----MDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG
        L+ + +   + + K+FD  V++ F++LD D DG L++ EL+           L         D +   V ++F       + + EFK V+ DILL MA G
Subjt:  LNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFEL-----MDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQG

Query:  IGNFPLQVALQQD
        +   P+ V L+ D
Subjt:  IGNFPLQVALQQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGA
TGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTC
ACGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTT
CAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG
mRNA sequenceShow/hide mRNA sequence
AAAACCAATATTAATTATTCTCTGTCGCTCTTCTTTCTCTTAAAATAAAATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATAT
TTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAA
TTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCACGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCT
TCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAGG
AAATAGATCAATTGCA
Protein sequenceShow/hide protein sequence
MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFHVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVAL
QQDSFLMKAVELEKAREQK