CuGenDBv2

Gene ID	CSPI01G33800
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Zeta-carotene desaturase
Genome location	Chr1:28762621..28763455
RNA-Seq Expression	CSPI01G33800
Synteny	CSPI01G33800
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0062597.1 uncharacterized protein E6C27_scaffold79G00940 [Cucumis melo var. makuwa]

9.3e-108

93.51

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Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNKTF +H  SSPSPSTSGRYHL RPFIVPRNLKIHDSSSVK  VRCFFSEKGRSSTT+ISNS SVELVNGDKPKSPMEVIGNSIIN
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALK L+KPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVG+GAGSSF FILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
        AFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV

TYK29720.1 uncharacterized protein E5676_scaffold3607G00320 [Cucumis melo var. makuwa]

9.3e-108

93.94

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Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNKTF +H  SSPSPSTSG YHL RPFIVPRNLKIHDSSSVK  VRCFFSEKGRSSTTSISNS SVELVNGDKPKSPMEVIGNSIIN
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALKAL+KPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVG+GAGSSF FILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
        AFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV

XP_004142521.1 uncharacterized protein LOC101210275 [Cucumis sativus]

2.2e-117

100

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Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
        AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV

XP_016903427.1 PREDICTED: uncharacterized protein LOC103503226 [Cucumis melo]

2.7e-107

93.48

Show/hide

Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNKTF +H  SSPSPSTSGRYHL RPFIVPRNLKIHDSSSVK  VRCFFSEKGRSSTT+ISNS SVELVNGDKPKSPMEVIGNSIIN
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALK L+KPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVG+GAGSSF FILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQ
        AFLLVSGFLSDRSD+SVLTAS+KTSVLKLQ
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQ

XP_038879886.1 uncharacterized protein LOC120071609 [Benincasa hispida]

9.9e-102

88.74

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Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNK F VH P SPSPSTSGRYHL RPFI+ RNL+I DSSSVK  VRCFF+EKG+SSTTSI+ SSS ELVNGDKPKSPMEVIG SI+N
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALKAL+KPAIAAVLLGLLLMYDPNSALAASGGRVGG++FSSRSSSSSRSYSTPRMSSGFSYSAPY+SPS+FGGGGIYVGPAVGVG+GAGSSFVFILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
        AFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M3K0 Uncharacterized protein

1.1e-117

100

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Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
        AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV

A0A1S4E5D0 uncharacterized protein LOC103503226

1.3e-107

93.48

Show/hide

Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNKTF +H  SSPSPSTSGRYHL RPFIVPRNLKIHDSSSVK  VRCFFSEKGRSSTT+ISNS SVELVNGDKPKSPMEVIGNSIIN
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALK L+KPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVG+GAGSSF FILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQ
        AFLLVSGFLSDRSD+SVLTAS+KTSVLKLQ
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQ

A0A5A7V6K8 Uncharacterized protein

4.5e-108

93.51

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Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNKTF +H  SSPSPSTSGRYHL RPFIVPRNLKIHDSSSVK  VRCFFSEKGRSSTT+ISNS SVELVNGDKPKSPMEVIGNSIIN
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALK L+KPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVG+GAGSSF FILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
        AFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV

A0A5D3E2D5 Uncharacterized protein

4.5e-108

93.94

Show/hide

Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVSASLLEPHPLKWNKTF +H  SSPSPSTSG YHL RPFIVPRNLKIHDSSSVK  VRCFFSEKGRSSTTSISNS SVELVNGDKPKSPMEVIGNSIIN
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        ALKAL+KPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVG+GAGSSF FILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
        AFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV

A0A6J1F3H3 uncharacterized protein LOC111439711

1.8e-88

80.52

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Query:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN
        MVS SLLEPHPLKWN+ F VH   SPSPSTSGR HL RPF++P+NL++  SSSVK+ VRCFFS++G  S T+ SNS    LV+GDKPK PMEVI NSI+N
Subjt:  MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIIN

Query:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA
        AL AL+KPAIAAVLLGLLLMYDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGPAVGVG+GAGSSF FILAGFA
Subjt:  ALKALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFA

Query:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
        AFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Subjt:  AFLLVSGFLSDRSDTSVLTASDKTSVLKLQV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G54520.1 unknown protein

4.4e-39

49.16

Show/hide

Query:  SASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINAL
        S++ LE  P +WN+         P P T   +H     ++  +     S+S++  +   + +   SS   + ++            +P E I   +  AL
Subjt:  SASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINAL

Query:  KALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSR----SSSSSRSYSTPRMSS-GFSYS---APYTSPSMFGGGGIYVGPAVGVGLGAGSSFVF
         +L+KPAIAAVLLGLLL YDPNSALAASGGR+GGN+FSSR    SSSSS+SYS PR S+  FSYS   APY  PS FGGG  +VGPAVG G G  SSF  
Subjt:  KALQKPAIAAVLLGLLLMYDPNSALAASGGRVGGNAFSSR----SSSSSRSYSTPRMSS-GFSYS---APYTSPSMFGGGGIYVGPAVGVGLGAGSSFVF

Query:  ILAGFAAFLLVSGFLSDRS-DTSVLTASDKTSVLKLQV
        IL GFAAF+LVSGFLSDRS D S+LT + KTSV+KLQV
Subjt:  ILAGFAAFLLVSGFLSDRS-DTSVLTASDKTSVLKLQV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTTCAGCGTCTTTGCTCGAACCCCATCCATTAAAATGGAACAAAACATTCCGAGTTCATTTACCCTCCTCTCCTTCTCCATCAACAAGTGGTCGCTATCATCTCTG
CCGACCCTTTATCGTACCCAGAAATTTGAAAATACATGATTCTAGCTCTGTCAAATACCCTGTTAGATGCTTCTTTTCCGAGAAAGGGAGGAGTTCAACGACTTCCATTT
CGAATTCTTCTTCGGTGGAATTGGTTAATGGAGATAAACCCAAAAGTCCAATGGAGGTAATTGGGAATTCGATTATTAATGCCCTCAAGGCGTTGCAGAAACCTGCAATT
GCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCCAATTCTGCGTTGGCCGCTTCTGGTGGACGAGTTGGAGGAAATGCGTTTTCGTCTCGCTCCTCCTCGTCTTC
GAGGAGTTACTCGACTCCCAGGATGAGTTCGGGGTTTTCGTATTCTGCACCGTACACTTCTCCGTCGATGTTTGGCGGTGGCGGGATTTATGTTGGGCCGGCAGTTGGGG
TTGGACTCGGTGCTGGCTCGAGTTTCGTCTTCATATTGGCGGGTTTCGCGGCGTTTCTTTTGGTCTCTGGATTTCTCTCTGATCGTTCCGACACTAGTGTTCTTACTGCC
TCTGATAAAACTAGCGTACTTAAACTACAAGTATGA

mRNA sequence

Show/hide mRNA sequence

AACAATCCTCATCCTTCCCACCAAAATTAATTGAAATAAAGAAAGAAAGAAAAATAAAATGAAAAAGAAAAATCAAATCTCTAATCTCTGATCCATTTCATACTCTCTTT
GAGATTCCAGTCTCAATCTTCCAAAATCCATGGTTTCAGCGTCTTTGCTCGAACCCCATCCATTAAAATGGAACAAAACATTCCGAGTTCATTTACCCTCCTCTCCTTCT
CCATCAACAAGTGGTCGCTATCATCTCTGCCGACCCTTTATCGTACCCAGAAATTTGAAAATACATGATTCTAGCTCTGTCAAATACCCTGTTAGATGCTTCTTTTCCGA
GAAAGGGAGGAGTTCAACGACTTCCATTTCGAATTCTTCTTCGGTGGAATTGGTTAATGGAGATAAACCCAAAAGTCCAATGGAGGTAATTGGGAATTCGATTATTAATG
CCCTCAAGGCGTTGCAGAAACCTGCAATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCCAATTCTGCGTTGGCCGCTTCTGGTGGACGAGTTGGAGGAAAT
GCGTTTTCGTCTCGCTCCTCCTCGTCTTCGAGGAGTTACTCGACTCCCAGGATGAGTTCGGGGTTTTCGTATTCTGCACCGTACACTTCTCCGTCGATGTTTGGCGGTGG
CGGGATTTATGTTGGGCCGGCAGTTGGGGTTGGACTCGGTGCTGGCTCGAGTTTCGTCTTCATATTGGCGGGTTTCGCGGCGTTTCTTTTGGTCTCTGGATTTCTCTCTG
ATCGTTCCGACACTAGTGTTCTTACTGCCTCTGATAAAACTAGCGTACTTAAACTACAAGTATGA

Protein sequence

Show/hide protein sequence

MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAI
AAVLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTA
SDKTSVLKLQV

CSPI01G33800 (gene) of Cucumber (PI 183967) v1 genome