; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G33820 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G33820
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein S24
Genome locationChr1:28775551..28777872
RNA-Seq ExpressionCSPI01G33820
SyntenyCSPI01G33820
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001976 - Ribosomal protein S24e
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR018098 - Ribosomal S24e conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588329.1 40S ribosomal protein S24-2, partial [Cucurbita argyrosperma subsp. sororia]4.4e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

XP_004139219.1 40S ribosomal protein S24-1 [Cucumis sativus]9.8e-6598.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKL RIYDVKD NAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

XP_004142519.1 40S ribosomal protein S24-1 [Cucumis sativus]8.9e-66100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

XP_008462725.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]5.8e-6598.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

XP_022933090.1 40S ribosomal protein S24-1-like [Cucurbita moschata]4.4e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LYE3 40S ribosomal protein S244.3e-66100Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

A0A1S3CHL4 40S ribosomal protein S242.8e-6598.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

A0A5D3E1B6 40S ribosomal protein S242.8e-6598.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

A0A6J1F3Y6 40S ribosomal protein S242.1e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

A0A6J1I401 40S ribosomal protein S242.1e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK GKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK

SwissProt top hitse value%identityAlignment
P62847 40S ribosomal protein S242.0e-3664.57Show/hide
Query:  VTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ VIDVLHPG+  V K E++EKLA++Y     + IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAK
        RKQ KERKNR KK+RG  K       K
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAK

P62848 40S ribosomal protein S242.0e-3664.57Show/hide
Query:  VTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ VIDVLHPG+  V K E++EKLA++Y     + IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAK
        RKQ KERKNR KK+RG  K       K
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAK

Q8LC83 40S ribosomal protein S24-23.2e-5887.12Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGR NVSKAELKEKLAR+Y+VKD NAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q962Q6 40S ribosomal protein S249.6e-3963.64Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        M +   TIRTRKFMTNRLL+RKQ V DVLHPG+P VSK E++EKLA++Y V   + +FVF F+T+FGGGKSTGF LIYD+++ AKK+EPK+RL R+GL  
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K   +RKQ KERKNR KK+RG KK+K   AAK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q9SS17 40S ribosomal protein S24-15.8e-6090.15Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGR NVSKAELKEKLAR+Y+VKD NAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Arabidopsis top hitse value%identityAlignment
AT3G04920.1 Ribosomal protein S24e family protein4.1e-6190.15Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGR NVSKAELKEKLAR+Y+VKD NAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

AT5G28060.1 Ribosomal protein S24e family protein2.3e-5987.12Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGR NVSKAELKEKLAR+Y+VKD NAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACAAGGCAGTCACCATACGAACCCGGAAGTTCATGACCAACCGGCTTCTCTCCAGGAAGCAATTTGTCATTGATGTTCTTCACCCAGGAAGACCTAATGTCTC
TAAGGCAGAGCTGAAGGAAAAGTTAGCAAGAATATATGATGTGAAGGATGCAAATGCAATTTTTGTCTTTAAGTTCCGAACTCACTTTGGAGGTGGAAAATCAACTGGGT
TCGGTTTGATTTATGATTCTGTTGAAAATGCCAAAAAATATGAGCCCAAGTACAGGCTCATCAGGAATGGGCTTGACACTAAAGTGGAAAAATCAAGGAAGCAAATGAAG
GAAAGGAAGAACAGAGCGAAGAAGATTCGTGGAGTAAAGAAAACAAAGGCCTCAGATGCTGCCAAGGGTGGAAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
CAACAACCCATTATAGCAACAATGGCGGCAACTCCTAGGGTTTCATCACTATAACTCAAGGTTTCATCACTATCTGATTCTTTCCTCTTTGCCGAACCTTCGTCTTCTTG
CTCTCTGCTACGATTCACTTCACTTCACTTCATCCCATTCGTCAACGATAATGGCGGACAAGGCAGTCACCATACGAACCCGGAAGTTCATGACCAACCGGCTTCTCTCC
AGGAAGCAATTTGTCATTGATGTTCTTCACCCAGGAAGACCTAATGTCTCTAAGGCAGAGCTGAAGGAAAAGTTAGCAAGAATATATGATGTGAAGGATGCAAATGCAAT
TTTTGTCTTTAAGTTCCGAACTCACTTTGGAGGTGGAAAATCAACTGGGTTCGGTTTGATTTATGATTCTGTTGAAAATGCCAAAAAATATGAGCCCAAGTACAGGCTCA
TCAGGAATGGGCTTGACACTAAAGTGGAAAAATCAAGGAAGCAAATGAAGGAAAGGAAGAACAGAGCGAAGAAGATTCGTGGAGTAAAGAAAACAAAGGCCTCAGATGCT
GCCAAGGGTGGAAAGAAGAAATGAGTTCACTTCTATGTTTTCGTGCCTAAGTGTTTTTCTCTATCATGTCTTTATTTCATCCCTCTCTAAATTTTAATTCTTAAGTGGTG
TTGGGCACTGCCAATGAAATCCATGTCTGGTTGATTATTGACACCAATGTTTTAGCCATTAATTTTGAATTTGGGGAGTTTTTTGCAGGGAACAATTTTGACATTAGTGA
CCATATATTTTATAGTTATCAAAAGTTTCATTATAAAAAGTGGTTGAAGTTGTGTTTGCGCGACTCTTCTGAAAGGCGAG
Protein sequenceShow/hide protein sequence
MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARIYDVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMK
ERKNRAKKIRGVKKTKASDAAKGGKKK