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CSPI02G00210 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G00210
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionElf4 domain-containing protein
Genome locationChr2:150654..150956
RNA-Seq ExpressionCSPI02G00210
SyntenyCSPI02G00210
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061471.1 protein ELF4-LIKE 3-like [Cucumis melo var. makuwa]7.0e-4496Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP
        M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIRELNNNIRRVVDLYADLSTSFT SIEHGDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP

KGN60512.1 hypothetical protein Csa_019281 [Cucumis sativus]2.2e-4599Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP
        MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKS EHGDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP

XP_022946747.1 protein ELF4-LIKE 3-like [Cucurbita moschata]1.6e-3274.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYA LS SFTKS+E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

XP_023521403.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo]6.1e-3273.39Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAA
        MEGETLS G      ++DGKM   FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYA LS SFTKS+E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

XP_038890489.1 protein ELF4-LIKE 3-like [Benincasa hispida]9.2e-3678.5Show/hide
Query:  MEGETLSRG-------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKP
        MEGETLS G       E+DGKMVQ FQKNFVQV+NIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYADLSTSFTKSI+ GDSA KP
Subjt:  MEGETLSRG-------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKP

Query:  GYKRNRP
        G+KRNRP
Subjt:  GYKRNRP

TrEMBL top hitse value%identityAlignment
A0A0A0LIL2 Elf4 domain-containing protein1.1e-4599Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP
        MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKS EHGDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP

A0A1U7WX74 protein ELF4-LIKE 3-like5.6e-3172.12Show/hide
Query:  MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYK
        MEG+TLS      +IDGK+VQ FQKNFVQVQNIL+QNR+LINEINQNQES++  N+SRNVGLIRELNNNIRRVVDLYADLSTSFTKS+++       G+K
Subjt:  MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYK

Query:  RNRP
        R+RP
Subjt:  RNRP

A0A5D3CFW0 Protein ELF4-LIKE 3-like3.4e-4496Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP
        M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIRELNNNIRRVVDLYADLSTSFT SIEHGDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP

A0A6J1G4K6 protein ELF4-LIKE 3-like7.8e-3374.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYA LS SFTKS+E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

A0A6J1KJ14 protein ELF4-LIKE 3-like7.8e-3374.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYA LS SFTKS+E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 47.1e-1546.15Show/hide
Query:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG
        E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN NI +VV++Y+DL+TSF+     G +    G
Subjt:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG

O80877 Protein ELF4-LIKE 11.8e-1042.17Show/hide
Query:  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG
        D ++       F + Q  L+QNR LI  +N+N  SR+  NVSRNVGLI E+N NI +V+++Y+DLS +F K  +      K G
Subjt:  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG

Q570U6 Protein ELF4-LIKE 42.4e-2358.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNVGLI+ELNNNIRRV  LY DLS SF +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG

Q8S8F5 Protein ELF4-LIKE 33.1e-2659.26Show/hide
Query:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAK
        MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RNVGLIRELNNN+RRV  LY DLS +F+KS+E    GDS+  
Subjt:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAK

Query:  PGYKRNRP
         G +R RP
Subjt:  PGYKRNRP

Q94BS8 Protein ELF4-LIKE 23.2e-2358.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG
        MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNVGLIRELNNNIR V  LY DLS SF +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 41.7e-2458.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNVGLI+ELNNNIRRV  LY DLS SF +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG

AT1G17455.2 ELF4-like 41.7e-2458.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNVGLI+ELNNNIRRV  LY DLS SF +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG

AT1G72630.1 ELF4-like 22.3e-2458.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG
        MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNVGLIRELNNNIR V  LY DLS SF +S++        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG

AT2G06255.1 ELF4-like 32.2e-2759.26Show/hide
Query:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAK
        MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RNVGLIRELNNN+RRV  LY DLS +F+KS+E    GDS+  
Subjt:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAK

Query:  PGYKRNRP
         G +R RP
Subjt:  PGYKRNRP

AT2G40080.1 Protein of unknown function (DUF1313)5.0e-1646.15Show/hide
Query:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG
        E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN NI +VV++Y+DL+TSF+     G +    G
Subjt:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGAT
CAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATG
CTGATCTCTCCACTTCCTTCACCAAATCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGAT
CAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATG
CTGATCTCTCCACTTCCTTCACCAAATCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG
Protein sequenceShow/hide protein sequence
MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP