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CSPI02G00300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G00300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosomal protein L18ae family
Genome locationChr2:186659..188774
RNA-Seq ExpressionCSPI02G00300
SyntenyCSPI02G00300
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141063.1 uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus]3.5e-68100Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSILLLIVVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

XP_008459564.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo]2.3e-6797.74Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSI+LLIVVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

XP_011648592.1 uncharacterized protein LOC101207093 isoform X1 [Cucumis sativus]2.1e-9298.86Show/hide
Query:  SSFGQARLPIHLTAFGRLKSSIRFTKWILRIRRVHPSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVE
        SSFGQARLPIHLTAFGRLKSSIRFTKWILRI RVH SINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVE
Subjt:  SSFGQARLPIHLTAFGRLKSSIRFTKWILRIRRVHPSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVE

Query:  DAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
        DAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
Subjt:  DAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL

XP_022946692.1 uncharacterized protein LOC111450686 [Cucurbita moschata]1.4e-6188.72Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPN K+D TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        +RRDPRERAGLAAS+IAALACS++LL+VVAV L
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

XP_038889607.1 uncharacterized protein LOC120079478 [Benincasa hispida]7.4e-6695.49Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSI+LL+VVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

TrEMBL top hitse value%identityAlignment
A0A0A0LKM2 Uncharacterized protein1.6e-10398.97Show/hide
Query:  MDIRGTVPSFVDDDKTAISSFGQARLPIHLTAFGRLKSSIRFTKWILRIRRVHPSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQG
        MDIRGTVPSFVDDDKTAISSFGQARLPIHLTAFGRLKSSIRFTKWILRI RVH SINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQG
Subjt:  MDIRGTVPSFVDDDKTAISSFGQARLPIHLTAFGRLKSSIRFTKWILRIRRVHPSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQG

Query:  KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
        KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
Subjt:  KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL

A0A1S3CAZ9 uncharacterized protein LOC1034986581.1e-6797.74Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSI+LLIVVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

A0A5D3CGZ6 60S ribosomal protein L18a-11.1e-6797.74Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSI+LLIVVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

A0A6J1G4J6 uncharacterized protein LOC1114506867.0e-6288.72Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPN K+D TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        +RRDPRERAGLAAS+IAALACS++LL+VVAV L
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

A0A6J1KAT7 uncharacterized protein LOC1114937952.0e-6187.97Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPN K+D TVQLVKSVSD+HLDLLRP+ARICSIFKGQGKDA DHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        +RRDPRERAGLAAS+IAALACS++LL+VVAV L
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54217.1 Ribosomal protein L18ae family3.1e-2262.92Show/hide
Query:  RSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        + KY L+R D ED+++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RDPRER+GLAASAIAAL  S+ L+I V VL+
Subjt:  RSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVAVLL

AT1G54217.2 Ribosomal protein L18ae family1.1e-2260Show/hide
Query:  DAPDHIRSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        D  +  + KY L+R D ED+++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RDPRER+GLAASAIAAL  S+ L+I V VL+
Subjt:  DAPDHIRSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVAVLL

AT4G26060.1 Ribosomal protein L18ae family3.8e-3661.79Show/hide
Query:  DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPR
        D + +LVKSV+DKH  L+RP A+  S      KDA    + +YTL++DV++ + G+YDKPLPCFGCGIGWFSFLLGF FP LWYYAT+LYF N  R+DPR
Subjt:  DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPR

Query:  ERAGLAASAIAALACSILLLIVV
        ERAGLAASAI A+  S+LLL++V
Subjt:  ERAGLAASAIAALACSILLLIVV

AT5G57060.1 FUNCTIONS IN: molecular_function unknown7.9e-3454.48Show/hide
Query:  MDPNGKM---DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILY
        MD N K    +   +LVK ++D+H  L++ ++R  S      KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP LWYYA  LY
Subjt:  MDPNGKM---DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILY

Query:  FWN-ARRDPRERAGLAASAIAALACSILLLIVVA
        F N  R+DPRERAGLAASAI A+  S++LL++ A
Subjt:  FWN-ARRDPRERAGLAASAIAALACSILLLIVVA

AT5G57060.2 BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1)1.2e-2966.3Show/hide
Query:  KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVA
        KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP LWYYA  LYF N  R+DPRERAGLAASAI A+  S++LL++ A
Subjt:  KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTCGGGGAACTGTCCCTTCATTTGTGGATGATGACAAGACGGCGATTTCTAGTTTTGGTCAAGCTAGGTTACCTATTCATCTGACGGCTTTTGGAAGATTGAA
AAGTTCCATAAGGTTTACAAAGTGGATACTGCGAATTCGAAGAGTTCATCCTTCCATAAACACCGGCTTCAGCATGGATCCAAATGGAAAAATGGACCAGACGGTGCAAC
TGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGCTCCAGACCACATAAGGAGCAAA
TACACACTTCTCAGAGATGTAGAGGATGCTCAGGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGAATAGGATGGTTTTCTTTCCTCCTGGGGTTTTTTTT
CCCATTGCTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGCACTTGCATGTTCGA
TCCTCTTGTTAATCGTGGTAGCTGTTCTTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATTCGGGGAACTGTCCCTTCATTTGTGGATGATGACAAGACGGCGATTTCTAGTTTTGGTCAAGCTAGGTTACCTATTCATCTGACGGCTTTTGGAAGATTGAA
AAGTTCCATAAGGTTTACAAAGTGGATACTGCGAATTCGAAGAGTTCATCCTTCCATAAACACCGGCTTCAGCATGGATCCAAATGGAAAAATGGACCAGACGGTGCAAC
TGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGCTCCAGACCACATAAGGAGCAAA
TACACACTTCTCAGAGATGTAGAGGATGCTCAGGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGAATAGGATGGTTTTCTTTCCTCCTGGGGTTTTTTTT
CCCATTGCTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGCACTTGCATGTTCGA
TCCTCTTGTTAATCGTGGTAGCTGTTCTTCTATGA
Protein sequenceShow/hide protein sequence
MDIRGTVPSFVDDDKTAISSFGQARLPIHLTAFGRLKSSIRFTKWILRIRRVHPSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSK
YTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL