| GenBank top hits | e value | %identity | Alignment |
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| KAA0061480.1 T-complex protein 1 subunit beta [Cucumis melo var. makuwa] | 7.6e-104 | 91.18 | Show/hide |
Query: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
MGDDGRLHAI DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDR+LRMKSNYAA+GLRTCVEAVML+ELFKHPHLLLFQIRNSIFKLPGGR+
Subjt: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
Query: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
RPNESDIDGLTRKL+KKLSANGASDAS WEV+ECLGMWWRPDFETLLFPYLSTNVKGAKEC KLFLVKLPES+KFVVPKNLKLIAVPLCQIHENHK++
Subjt: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
Query: IISG
++G
Subjt: IISG
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| TYK10794.1 T-complex protein 1 subunit beta [Cucumis melo var. makuwa] | 2.0e-104 | 92.65 | Show/hide |
Query: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
MGDDGRLHAI DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAA+GLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGR+
Subjt: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
Query: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
RPNESDIDGLTRKL+KKLSANGASDAS WEVSECLGMWWRPDFETLLFPYLSTNVKGAKEC KLFLVKLPES+KFVVPKNLKLIAVPLCQIHENHK++
Subjt: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
Query: IISG
++G
Subjt: IISG
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| XP_004141062.1 pre-mRNA cleavage factor Im 25 kDa subunit 1 [Cucumis sativus] | 2.8e-122 | 100 | Show/hide |
Query: MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
Subjt: MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
Query: NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
Subjt: NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
Query: SGIPQLLSKFSFNIIGT
SGIPQLLSKFSFNIIGT
Subjt: SGIPQLLSKFSFNIIGT
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| XP_008459551.1 PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Cucumis melo] | 3.0e-116 | 94.52 | Show/hide |
Query: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
MGDDGRLHAI DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDR+LRMKSNYAA+GLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGR+
Subjt: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
Query: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
RPNESDIDGLTRKL+KKL ANGASDAS WEV+ECLGMWWRPDFETLLFPYLSTNVKGAKEC KLFLVKLPES+KFVVPKNLKLIAVPLCQIHENHKTYGP
Subjt: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
Query: IISGIPQLLSKFSFNIIGT
+ISGIPQLLSKFSFNIIGT
Subjt: IISGIPQLLSKFSFNIIGT
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| XP_038889512.1 pre-mRNA cleavage factor Im 25 kDa subunit 1 [Benincasa hispida] | 3.3e-107 | 88.02 | Show/hide |
Query: MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
MGDDGRLHA+DDD+AS+A Q I IYPLSNYYF SKEPLLFKDET +DR+LRMKSNYAA+GLRT VEAV+LVELFKHPHLLLFQIRNSIFKLPGGR+RP
Subjt: MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
Query: NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
NESD+DGLTRKL++KLSANGASDAS WEV ECLGMWWRPDFETLLFPYLS+ VKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP+I
Subjt: NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
Query: SGIPQLLSKFSFNIIGT
SGIPQLLSKFSF+II T
Subjt: SGIPQLLSKFSFNIIGT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LIM0 Pre-mRNA cleavage factor Im 25 kDa subunit | 1.3e-122 | 100 | Show/hide |
Query: MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
Subjt: MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
Query: NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
Subjt: NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
Query: SGIPQLLSKFSFNIIGT
SGIPQLLSKFSFNIIGT
Subjt: SGIPQLLSKFSFNIIGT
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| A0A1S3C9Z9 Pre-mRNA cleavage factor Im 25 kDa subunit | 1.4e-116 | 94.52 | Show/hide |
Query: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
MGDDGRLHAI DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDR+LRMKSNYAA+GLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGR+
Subjt: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
Query: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
RPNESDIDGLTRKL+KKL ANGASDAS WEV+ECLGMWWRPDFETLLFPYLSTNVKGAKEC KLFLVKLPES+KFVVPKNLKLIAVPLCQIHENHKTYGP
Subjt: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
Query: IISGIPQLLSKFSFNIIGT
+ISGIPQLLSKFSFNIIGT
Subjt: IISGIPQLLSKFSFNIIGT
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| A0A5A7V2I9 CCT-beta | 3.7e-104 | 91.18 | Show/hide |
Query: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
MGDDGRLHAI DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDR+LRMKSNYAA+GLRTCVEAVML+ELFKHPHLLLFQIRNSIFKLPGGR+
Subjt: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
Query: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
RPNESDIDGLTRKL+KKLSANGASDAS WEV+ECLGMWWRPDFETLLFPYLSTNVKGAKEC KLFLVKLPES+KFVVPKNLKLIAVPLCQIHENHK++
Subjt: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
Query: IISG
++G
Subjt: IISG
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| A0A5D3CI10 CCT-beta | 9.7e-105 | 92.65 | Show/hide |
Query: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
MGDDGRLHAI DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAA+GLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGR+
Subjt: MGDDGRLHAI--DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRI
Query: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
RPNESDIDGLTRKL+KKLSANGASDAS WEVSECLGMWWRPDFETLLFPYLSTNVKGAKEC KLFLVKLPES+KFVVPKNLKLIAVPLCQIHENHK++
Subjt: RPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGP
Query: IISG
++G
Subjt: IISG
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| A0A6J1DN47 Pre-mRNA cleavage factor Im 25 kDa subunit | 2.4e-103 | 83.72 | Show/hide |
Query: MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
MGD+G LHA++DD+A++A Q + IYPL NYYFGSKEPLLFK+ETL+DR+ RMKSNYAA+GLRTCVEAV+LVELFKHPHLLL QIRNSIFKLPGGR+RP
Subjt: MGDDGRLHAIDDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRP
Query: NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
NESDIDGL RKL++KLSANG SDAS WEV ECLGMWWRPDFETLL+PYLS+NVKGAKECTKLFLVKLPESRKF+VPKNLKLIAVPLCQ+HEN KTYGP+I
Subjt: NESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPII
Query: SGIPQLLSKFSFNII
SG+PQLLSKFSFNII
Subjt: SGIPQLLSKFSFNII
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O43809 Cleavage and polyadenylation specificity factor subunit 5 | 3.4e-46 | 45.55 | Show/hide |
Query: IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASD
I++YPL+NY FG+KEPL KD +++ R RM+ + G+R VE V++V + PH+LL Q+ + FKLPGG + P E +++GL R +T+ L G D
Subjt: IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASD
Query: A--SHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSF
W + +C+G WWRP+FE +PY+ ++ KE KLFLV+L E F VPKN KL+A PL ++++N YGPIIS +PQLLS+F+F
Subjt: A--SHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSF
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| Q3ZCA2 Cleavage and polyadenylation specificity factor subunit 5 | 3.4e-46 | 45.55 | Show/hide |
Query: IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASD
I++YPL+NY FG+KEPL KD +++ R RM+ + G+R VE V++V + PH+LL Q+ + FKLPGG + P E +++GL R +T+ L G D
Subjt: IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASD
Query: A--SHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSF
W + +C+G WWRP+FE +PY+ ++ KE KLFLV+L E F VPKN KL+A PL ++++N YGPIIS +PQLLS+F+F
Subjt: A--SHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSF
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| Q7T3C6 Cleavage and polyadenylation specificity factor subunit 5 | 2.6e-46 | 45.55 | Show/hide |
Query: IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASD
I++YPL+NY FG+KEPL KD +++ R RM+ + G+R VE V++V + PH+LL Q+ + FKLPGG + P E +++GL R +T+ L G D
Subjt: IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASD
Query: A--SHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSF
W + +C+G WWRP+FE +PY+ ++ KE KLFLV+L E F VPKN KL+A PL ++++N YGPIIS +PQLLS+F+F
Subjt: A--SHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSF
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| Q8GXS3 Pre-mRNA cleavage factor Im 25 kDa subunit 2 | 1.6e-59 | 52.58 | Show/hide |
Query: IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASD
++ YPLSNY FG+KEP L KD +++DR+ RMK NY G+RT VE ++LV+ HPH+LL QI N+ KLPGGR++P E++ DGL RKLT KL N A+
Subjt: IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASD
Query: ASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSFNIIGT
W V EC+ WWRP+FET+++PY ++ KEC +L++V L E F VPKNLKL+AVPL ++++N + YGP+IS IPQ LS+F FN+I +
Subjt: ASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSFNIIGT
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| Q94AF0 Pre-mRNA cleavage factor Im 25 kDa subunit 1 | 2.5e-81 | 65.92 | Show/hide |
Query: MGDDGRLHAIDDDDASS--------AHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFK
MG++ R A+D ++ S H L +D+YPLS+YYFGSKE L KDE +SDRV+R+KSNYAAHGLRTCVEAV+LVELFKHPH+LL Q RNSIFK
Subjt: MGDDGRLHAIDDDDASS--------AHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLFQIRNSIFK
Query: LPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHEN
LPGGR+RP ESDI+GL RKL KLS N S +EV EC+GMWWRP+FETL++P+L N+K KECTKLFLV+LP ++FVVPKN KL+AVPLCQ+HEN
Subjt: LPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHEN
Query: HKTYGPIISGIPQLLSKFSFNII
KTYGPI+S IP+LLSKFSFN++
Subjt: HKTYGPIISGIPQLLSKFSFNII
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