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CSPI02G00870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G00870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationChr2:525397..526023
RNA-Seq ExpressionCSPI02G00870
SyntenyCSPI02G00870
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061529.1 RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]1.5e-5388.79Show/hide
Query:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
        MATSAN+AA YIMDIESMFDLDTVL+GADDFYYFHT VAPPPV+VA+LPTV A DD CAVCMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR 
Subjt:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC

Query:  HIAPGDKTETSKTVQV
        HIAPGDKTETSKTVQV
Subjt:  HIAPGDKTETSKTVQV

KAE8651508.1 hypothetical protein Csa_019333 [Cucumis sativus]3.6e-60100Show/hide
Query:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
        MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
Subjt:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC

Query:  HIAPGDKTETSKT
        HIAPGDKTETSKT
Subjt:  HIAPGDKTETSKT

XP_011650093.1 E3 ubiquitin-protein ligase RNF115 [Cucumis sativus]8.6e-62100Show/hide
Query:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
        MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
Subjt:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC

Query:  HIAPGDKTETSKTVQV
        HIAPGDKTETSKTVQV
Subjt:  HIAPGDKTETSKTVQV

XP_023537996.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]1.9e-4069.57Show/hide
Query:  ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCH
        AT + +AASYIMD+ESMFDLDTVLTGADD+Y    +  PP V+VA+LPTV   DDVCAVCME+F  DEGGKQIPCGHVYHQ+C+SSWLS+ D CPLCRCH
Subjt:  ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCH

Query:  IAPGDKTETSKTVQV
        ++  +K+ET+K VQV
Subjt:  IAPGDKTETSKTVQV

XP_038877426.1 E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida]1.1e-4378.95Show/hide
Query:  TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI
        T++ YAASYIMDIESMFDLDTVLTGADDFYY  TVVAPPPV+VA+LPTV A  DVCAVC+EDFLPDE GKQIPCGHVYHQSCLSSWLS+ DSCPLCR HI
Subjt:  TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI

Query:  APGDKTETSKTVQV
        A  ++ E  KT  V
Subjt:  APGDKTETSKTVQV

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ1 RING-type domain-containing protein4.2e-62100Show/hide
Query:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
        MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
Subjt:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC

Query:  HIAPGDKTETSKTVQV
        HIAPGDKTETSKTVQV
Subjt:  HIAPGDKTETSKTVQV

A0A5A7V793 RING-H2 finger protein ATL5-like7.1e-5488.79Show/hide
Query:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
        MATSAN+AA YIMDIESMFDLDTVL+GADDFYYFHT VAPPPV+VA+LPTV A DD CAVCMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR 
Subjt:  MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC

Query:  HIAPGDKTETSKTVQV
        HIAPGDKTETSKTVQV
Subjt:  HIAPGDKTETSKTVQV

A0A6J1FDN7 E3 ubiquitin-protein ligase RING1-like8.5e-3968.1Show/hide
Query:  ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSI-RDSCPLCRC
        AT + +AA YIMD+ESMFDLDTVLTGADD+Y    +  PP V+VA+LPTV   DDVCAVCME+F  DEGGKQIPCGHVYHQ+C+SSWLS+  D CPLCRC
Subjt:  ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSI-RDSCPLCRC

Query:  HIAPGDKTETSKTVQV
        H++  +K+ET+K VQV
Subjt:  HIAPGDKTETSKTVQV

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like1.8e-2557.14Show/hide
Query:  TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI
        T+ N AA+Y   IE +FDLD VL+GADDF      ++    +VA+LPTV A  DVCAVC+EDF PDE GKQIPCGHVYH+SC+SSWL++ + CPLCRC I
Subjt:  TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI

Query:  APGDKTETSKTV
        A       S T+
Subjt:  APGDKTETSKTV

A0A6J1HNM2 E3 ubiquitin-protein ligase RNF181-like1.3e-3968.97Show/hide
Query:  ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVA-PPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC
        AT + +AASYIMD+ESMFDLDTVLTGADD+Y    ++  PP V+V++LPTV   DDVCAVCME+F  DEGGKQIPCGHVYHQSC+SSWLS+ D CPLCRC
Subjt:  ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVA-PPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC

Query:  HIAPGDKTETSKTVQV
        H++  +K ET+K VQV
Subjt:  HIAPGDKTETSKTVQV

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING19.4e-1146.55Show/hide
Query:  CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQ
        CAVCM+DF      KQ+PC H+YH+ CL  WL + +SCP+CR H  P D  +  + V+
Subjt:  CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQ

Q8LPN7 E3 ubiquitin-protein ligase RING1-like2.1e-1043.94Show/hide
Query:  LPTVAAADDV-------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGD
        LPTV    D+       CAVCM++F      KQ+PC HV+HQ CL  WL + +SCP+CR  +   D
Subjt:  LPTVAAADDV-------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGD

Q9D0C1 E3 ubiquitin-protein ligase RNF1151.6e-1034.94Show/hide
Query:  PPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKT
        PPP     +  LPTV    +       C VC ED+  +E  +Q+PC H +H SC+  WL + D+CP+CR  +   D T  +++
Subjt:  PPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKT

Q9LZJ6 RING-H2 finger protein ATL54.7e-1038.57Show/hide
Query:  TVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIP-CGHVYHQSCLSSWLSIRDSCPLCRCHIAP
        TV+   P+ V  + T  +  + C+VC+ +F  D+ G+ +P CGHV+H  C+ +W   R SCPLCR  + P
Subjt:  TVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIP-CGHVYHQSCLSSWLSIRDSCPLCRCHIAP

Q9Y4L5 E3 ubiquitin-protein ligase RNF1153.2e-1135.29Show/hide
Query:  PPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQ
        PPP     +  LPTV    +       C VC ED+  +E  +Q+PC H +H SC+  WL + D+CP+CR  +   D T  S++ +
Subjt:  PPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQ

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein1.5e-1138.96Show/hide
Query:  VAPPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPG
        + PPP     +  + TV   D+      VCA+C E+F   E GK++ C H+YH SC+ SWL+I ++CP+CR  +  G
Subjt:  VAPPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPG

AT3G02340.1 RING/U-box superfamily protein1.1e-1132.04Show/hide
Query:  NYAASYIMD--IESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIA
        N++  Y  D  +  MFD +T + G        +V+   PV+   +  +   ++VCAVC ++ L +E  +++PC H YH  C+  WL IR++CP+CR  + 
Subjt:  NYAASYIMD--IESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIA

Query:  PGD
          D
Subjt:  PGD

AT3G19950.1 RING/U-box superfamily protein1.5e-1143.94Show/hide
Query:  LPTVAAADDV-------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGD
        LPTV    D+       CAVCM++F      KQ+PC HV+HQ CL  WL + +SCP+CR  +   D
Subjt:  LPTVAAADDV-------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGD

AT4G26400.1 RING/U-box superfamily protein1.5e-1136.23Show/hide
Query:  MVAELPTVAAADDV-CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETS
        +V  LPTV  ++ + C++C++DF      K++PC H +H  C+  WL +  SCP+CR  + P D+T+ +
Subjt:  MVAELPTVAAADDV-CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETS

AT4G26400.2 RING/U-box superfamily protein1.5e-1136.23Show/hide
Query:  MVAELPTVAAADDV-CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETS
        +V  LPTV  ++ + C++C++DF      K++PC H +H  C+  WL +  SCP+CR  + P D+T+ +
Subjt:  MVAELPTVAAADDV-CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACATCAGCTAATTATGCAGCAAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCACCGGAGCCGATGACTTCTATTACTTCCACACCGT
TGTAGCGCCACCACCCGTGATGGTTGCTGAATTACCGACAGTGGCTGCAGCGGACGATGTATGTGCGGTTTGTATGGAGGATTTTCTGCCGGATGAAGGCGGTAAACAGA
TCCCATGTGGCCATGTGTACCATCAATCTTGCTTATCGTCTTGGCTCTCTATCCGCGACTCTTGCCCTCTCTGCCGCTGTCATATCGCCCCCGGTGACAAAACGGAGACG
TCCAAAACCGTACAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
CTTCTTACAAATCGATAAAAGAAAAAATAAACAAATACTGATATCCATGGCTACATCAGCTAATTATGCAGCAAGTTACATCATGGACATTGAATCAATGTTCGATCTCG
ACACGGTCCTCACCGGAGCCGATGACTTCTATTACTTCCACACCGTTGTAGCGCCACCACCCGTGATGGTTGCTGAATTACCGACAGTGGCTGCAGCGGACGATGTATGT
GCGGTTTGTATGGAGGATTTTCTGCCGGATGAAGGCGGTAAACAGATCCCATGTGGCCATGTGTACCATCAATCTTGCTTATCGTCTTGGCTCTCTATCCGCGACTCTTG
CCCTCTCTGCCGCTGTCATATCGCCCCCGGTGACAAAACGGAGACGTCCAAAACCGTACAAGTTTAGTTTGGTTTTGTGCTAGATTTGAATATGAAATTTGGAATTCGGC
TATCATTCAATCAAAATGTGGTAAAGATTCAAAAGCTCACGTTTTGAACAACTTGTGTATTCGATTCAACGATTATTAAGAGCAAACAAGTTCTGGATGTGTATATTGTT
CTAACGATCTCATGACAGTAATAATAATATATGATTGTTATAAGAACTTTATGGAATGAACTTTCCTTCACTGGTCT
Protein sequenceShow/hide protein sequence
MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTET
SKTVQV