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CSPI02G00880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G00880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationChr2:533095..533739
RNA-Seq ExpressionCSPI02G00880
SyntenyCSPI02G00880
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651509.1 hypothetical protein Csa_019434 [Cucumis sativus]7.7e-63100Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSTLIRR
        CLVAGQPPDSTLIRR
Subjt:  CLVAGQPPDSTLIRR

XP_004150849.1 E3 ubiquitin-protein ligase RNF181 [Cucumis sativus]7.7e-63100Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSTLIRR
        CLVAGQPPDSTLIRR
Subjt:  CLVAGQPPDSTLIRR

XP_016901521.1 PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo]6.8e-5995.69Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

XP_022946863.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]6.0e-4778.81Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAA +V  E T NL + YPIEFLFDLD VLSGADD GCCQI+ SDS VAD PTVVADVCAVCL+DF PDE GKQIPCGHVYHESCISSWL VA+CCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPD---STLIRR
        CL+AGQPP+   STLIRR
Subjt:  CLVAGQPPD---STLIRR

XP_038877422.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]9.5e-5387.83Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAAAAVMTEPT NLP+ YPIEFLFDLD VLSGADD GCCQI+ +DS VAD P VVADVCAVCL+DF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSTLIRR
        C VAGQPPDSTLIRR
Subjt:  CLVAGQPPDSTLIRR

TrEMBL top hitse value%identityAlignment
A0A0A0LKR7 RING-type domain-containing protein3.7e-63100Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSTLIRR
        CLVAGQPPDSTLIRR
Subjt:  CLVAGQPPDSTLIRR

A0A1S4DZX3 RING-H2 finger protein ATL5-like3.3e-5995.69Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

A0A5A7V2P4 RING-H2 finger protein ATL5-like3.3e-5995.69Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like2.4e-3869.83Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQIT---PSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCP
        MAA AV+ E T NL + YP+E LFDLD VLSG DD GCC +T    SDS VAD PTVVADVCAVC +DF  DE GKQIPCGHVYHE CISSWL VADCCP
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQIT---PSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCP

Query:  LCRCLVAGQPPDSTLI
        LCR  V   PP ST I
Subjt:  LCRCLVAGQPPDSTLI

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like2.9e-4778.81Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAA +V  E T NL + YPIEFLFDLD VLSGADD GCCQI+ SDS VAD PTVVADVCAVCL+DF PDE GKQIPCGHVYHESCISSWL VA+CCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPD---STLIRR
        CL+AGQPP+   STLIRR
Subjt:  CLVAGQPPD---STLIRR

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING13.9e-0945.1Show/hide
Query:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD
        CAVC+DDF      KQ+PC H+YH+ C+  WL + + CP+CR  +    PD
Subjt:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD

Q8LPN7 E3 ubiquitin-protein ligase RING1-like1.9e-0843.14Show/hide
Query:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD
        CAVC+D+F      KQ+PC HV+H+ C+  WL + + CP+CR  +    PD
Subjt:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD

Q9SPL2 E3 ubiquitin-protein ligase CIP83.3e-0853.49Show/hide
Query:  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        VCAVC D     E GK++PCGH YH  CI  WL   + CP+CR
Subjt:  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Q9VHI7 E3 ubiquitin-protein ligase Iruka1.8e-0944.23Show/hide
Query:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDS
        C++C DDF  DE  +++PC H+YHE+CI  WL +   CP+CR  +A    D+
Subjt:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDS

Q9Y4L5 E3 ubiquitin-protein ligase RNF1153.3e-0845.28Show/hide
Query:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST
        C VC +D+  +E  +Q+PC H +H SCI  WL + D CP+CR  + G+  DST
Subjt:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein1.6e-1045.28Show/hide
Query:  VADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        + D   V   VCA+C ++F   E GK++ C H+YH SCI SWL + + CP+CR
Subjt:  VADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

AT2G44330.1 RING/U-box superfamily protein8.1e-1046.43Show/hide
Query:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR--CLVAGQPPDSTL
        CA+C +DF   E+ +++PC H+YH  CI  WLT  + CPLCR    VA    DS L
Subjt:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR--CLVAGQPPDSTL

AT3G19950.1 RING/U-box superfamily protein1.4e-0943.14Show/hide
Query:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD
        CAVC+D+F      KQ+PC HV+H+ C+  WL + + CP+CR  +    PD
Subjt:  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD

AT3G60080.1 RING/U-box superfamily protein3.1e-0948.84Show/hide
Query:  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        +CAVC +DF   E+ +++PC H+YH  CI  WL+  + CPLCR
Subjt:  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

AT5G64920.1 COP1-interacting protein 82.4e-0953.49Show/hide
Query:  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        VCAVC D     E GK++PCGH YH  CI  WL   + CP+CR
Subjt:  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCTGCTGTCATGACTGAACCCACAATTAATTTACCTTCGCCATATCCAATCGAATTTCTCTTTGACCTCGATACAGTTCTCTCCGGAGCCGACGACCTCGG
TTGCTGCCAGATCACCCCTTCCGATTCTCCCGTGGCGGATTTCCCGACGGTTGTGGCCGATGTTTGTGCCGTTTGTTTAGACGATTTCCACCCAGATGAAGCCGGTAAAC
AAATACCCTGCGGACACGTGTACCATGAGTCTTGTATTTCCTCCTGGCTTACCGTTGCCGACTGTTGCCCTCTCTGTCGGTGCCTTGTCGCTGGCCAACCGCCGGATTCA
ACTTTGATCCGACGGTAG
mRNA sequenceShow/hide mRNA sequence
ATACGATTGATTGGGTAAAATATTTGACATAACAAATAAAATAGTGTATAAGAATAAAGCCTTCTCACACAAATAGAACCCGCTATCTACTCCTCCATTTCCTTACTTCC
TAACGCACTTTCTCCCTTAAATTCTCTCAACAATCTCTCCAATGGCTGCCGCTGCTGTCATGACTGAACCCACAATTAATTTACCTTCGCCATATCCAATCGAATTTCTC
TTTGACCTCGATACAGTTCTCTCCGGAGCCGACGACCTCGGTTGCTGCCAGATCACCCCTTCCGATTCTCCCGTGGCGGATTTCCCGACGGTTGTGGCCGATGTTTGTGC
CGTTTGTTTAGACGATTTCCACCCAGATGAAGCCGGTAAACAAATACCCTGCGGACACGTGTACCATGAGTCTTGTATTTCCTCCTGGCTTACCGTTGCCGACTGTTGCC
CTCTCTGTCGGTGCCTTGTCGCTGGCCAACCGCCGGATTCAACTTTGATCCGACGGTAGAGGTTTCTTCTTTCTTTCTTTTTTCGCTTTTTTTGTTGGTGAGGTTTGTTC
GACAAATTACAAGTAATTAATTGTTGTTGATTATTGTGATTGCGACTCTTCTCCAAATTTGGAATTAGCTGCTAATTGAACATATTAACTCTCTC
Protein sequenceShow/hide protein sequence
MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDS
TLIRR