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CSPI02G01100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G01100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationChr2:731859..732549
RNA-Seq ExpressionCSPI02G01100
SyntenyCSPI02G01100
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061549.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]1.0e-5298.32Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSF
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSF
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSF

Query:  FLHLGLVNADDSPLLYVLE
        FLHLGLVNADDSPLLYVLE
Subjt:  FLHLGLVNADDSPLLYVLE

XP_004139345.1 uncharacterized protein LOC101209110 [Cucumis sativus]4.9e-3998.95Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

XP_008458440.1 PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]9.3e-3896.84Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

XP_008458447.1 PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo]3.5e-3793.88Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCL
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ M  +
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCL

XP_038889658.1 uncharacterized protein LOC120079520 [Benincasa hispida]4.8e-3491.58Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MASLK VSRLSSRLQSLAPKFNKRSS SEL  FKS CQSQPS ASTSRL CTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein2.4e-3998.95Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

A0A1S3C7U8 uncharacterized protein LOC103497847 isoform X14.5e-3896.84Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

A0A1S3C7Z3 uncharacterized protein LOC103497847 isoform X21.7e-3793.88Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCL
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ M  +
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCL

A0A5A7V7B3 Protein NUCLEAR FUSION DEFECTIVE 65.0e-5398.32Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSF
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSF
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSF

Query:  FLHLGLVNADDSPLLYVLE
        FLHLGLVNADDSPLLYVLE
Subjt:  FLHLGLVNADDSPLLYVLE

A0A6J1G399 uncharacterized protein LOC1114503802.0e-3388.42Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MASL+AVSRLSSRLQSLAPK NKRS SSEL  FKS CQSQPSAASTSR+ CTSRLP+ELSSQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG+
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein2.4e-1550.53Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MAS   + RLSS++ SL  K +K  ++  + S  S  +S   +++TSR++ + RLPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG+
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

AT1G55205.2 unknown protein1.1e-1548.54Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSF
        MAS   + RLSS++ SL  K +K  ++  + S  S  +S   +++TSR++ + RLPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG    S 
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSF

Query:  FLH
        +L+
Subjt:  FLH

AT3G13674.1 unknown protein5.9e-1453.61Show/hide
Query:  MASLKAVSRLSSRLQSLAPKF-NKRSSSSELFS-FKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        MAS + + R SSRL+SL     NK ++ S L S  KS   + PS+A++ RL+ +SRLPVELS   S++PLHSAIA++RL+SSL++ES+ WGLVPQG+
Subjt:  MASLKAVSRLSSRLQSLAPKF-NKRSSSSELFS-FKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM

AT4G17310.1 unknown protein5.5e-0438.82Show/hide
Query:  FNKRSSSSELFSFKSTCQSQPSAAST--------SRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFC
        FN+ S SS   + +ST  S  +A+S         +R    SR P EL    SL+PLHS +AAARL S L+  S+    + QG  C
Subjt:  FNKRSSSSELFSFKSTCQSQPSAAST--------SRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFC

AT4G39300.1 unknown protein1.1e-0436.11Show/hide
Query:  RSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM
        R+ + +  + K T  S P A+ +  +   SR+   L S  +++PLHSA+A+ARL SS+  +S  W L+ QG+
Subjt:  RSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAAGCAGTTTCTCGGTTATCATCCCGCTTGCAATCACTCGCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTG
TCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTG
CAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGTATGTTTTGCTTAAGTTTCTTCTTGCATCTGGGTCTTGTGAATGCTGAT
GATTCTCCATTATTGTATGTGCTCGAGGAATGTAGCCAAAGAAGCATTCCAAATATCCTTTTGTTTTTCAATGCATATGTCTTGCGGAATTCTAGTACGATTGAGTTAAT
CGGCATGGTGTTTGCCTGTACTACTAGAATTGTCATGACCTTTGAATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTTAAAAGCAGTTTCTCGGTTATCATCCCGCTTGCAATCACTCGCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTG
TCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTG
CAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGTATGTTTTGCTTAAGTTTCTTCTTGCATCTGGGTCTTGTGAATGCTGAT
GATTCTCCATTATTGTATGTGCTCGAGGAATGTAGCCAAAGAAGCATTCCAAATATCCTTTTGTTTTTCAATGCATATGTCTTGCGGAATTCTAGTACGATTGAGTTAAT
CGGCATGGTGTTTGCCTGTACTACTAGAATTGTCATGACCTTTGAATTGTGA
Protein sequenceShow/hide protein sequence
MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSFFLHLGLVNAD
DSPLLYVLEECSQRSIPNILLFFNAYVLRNSSTIELIGMVFACTTRIVMTFEL