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CSPI02G01300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G01300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHeavy metal transport/detoxification superfamily protein
Genome locationChr2:886459..887403
RNA-Seq ExpressionCSPI02G01300
SyntenyCSPI02G01300
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599442.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1879.66Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ
        MHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTGDV  FEV+QC+SKV+SVEILEPQ
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ

KAG7030420.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-1879.66Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ
        MHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTGDV  FEV+QC+SKV+SVEILEPQ
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ

XP_008458177.1 PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo]7.6e-2293.22Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ
        MHCNGCARRVEK ISKIQGVESWKVDMERE VVVTGDVFPFEVM+CISKVKSVEILE Q
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ

XP_022946348.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]3.0e-1879.66Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ
        MHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTGDV  FEV+QC+SKV+SVEILEPQ
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ

XP_031736582.1 uncharacterized protein LOC116402031 [Cucumis sativus]1.9e-25100Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV
        MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV

TrEMBL top hitse value%identityAlignment
A0A0A0LFW6 HMA domain-containing protein9.4e-26100Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV
        MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV

A0A1S3C8H9 uncharacterized protein LOC1034976913.7e-2293.22Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ
        MHCNGCARRVEK ISKIQGVESWKVDMERE VVVTGDVFPFEVM+CISKVKSVEILE Q
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ

A0A5A7V1Y2 Copper-binding family protein3.7e-2293.22Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ
        MHCNGCARRVEK ISKIQGVESWKVDMERE VVVTGDVFPFEVM+CISKVKSVEILE Q
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ

A0A6J1G3J1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X11.5e-1879.66Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ
        MHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTGDV  FEV+QC+SKV+SVEILEPQ
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ

A0A6J1KFP0 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X12.1e-1777.97Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ
        MHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTGDV  FEV+QC+SKV+SVEILE Q
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQ

SwissProt top hitse value%identityAlignment
A0JPW5 Heavy metal-associated isoprenylated plant protein 191.5e-0440.82Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISK
        MHCN C R++ + ISK +GVE++  DM    VVV G + P ++++ + K
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISK

Q0WV37 Heavy metal-associated isoprenylated plant protein 341.8e-0543.86Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKV-KSVEIL
        +HC GC  +V+K + KI+GV S K D+E+  V VTG++ P  +++ +SK  K  EIL
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKV-KSVEIL

Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 23.5e-0944.44Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE
        +HC GC  +V KH++++QGV S+ +D   + V VTGD+ P E++  ISKVK+ +
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 19.1e-1050Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE
        +HC GCA +V+KH+SK++GV S+ +D   + V VTGDV P  V+  ISKVK+ +
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 36.3e-1149.12Show/hide
Query:  HCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEP
        HC GC  +V+KH+SK+QGV S+ +D   + V VTGD+ P EV+ C+SKVK+ +   P
Subjt:  HCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEP

Arabidopsis top hitse value%identityAlignment
AT3G24450.1 Heavy metal transport/detoxification superfamily protein5.8e-1250.91Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEI
        MHC GCA++VEKHISK+ GV  +KV++E + VVV G++ P +V++ I KVK+ ++
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEI

AT3G53530.1 Chloroplast-targeted copper chaperone protein4.5e-1249.12Show/hide
Query:  HCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEP
        HC GC  +V+KH+SK+QGV S+ +D   + V VTGD+ P EV+ C+SKVK+ +   P
Subjt:  HCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEP

AT3G53530.2 Chloroplast-targeted copper chaperone protein1.1e-1048.28Show/hide
Query:  HCNGCARRVEKHISKIQ-GVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEP
        HC GC  +V+KH+SK+Q GV S+ +D   + V VTGD+ P EV+ C+SKVK+ +   P
Subjt:  HCNGCARRVEKHISKIQ-GVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEP

AT5G02600.1 Heavy metal transport/detoxification superfamily protein6.5e-1150Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE
        +HC GCA +V+KH+SK++GV S+ +D   + V VTGDV P  V+  ISKVK+ +
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE

AT5G02600.2 Heavy metal transport/detoxification superfamily protein6.5e-1150Show/hide
Query:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE
        +HC GCA +V+KH+SK++GV S+ +D   + V VTGDV P  V+  ISKVK+ +
Subjt:  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGCGTGGAATCATGGAAGGTAGATATGGAAAGGGAGACTGTGGTTGTTACCGGAGA
TGTTTTTCCTTTTGAAGTCATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAAGTT
mRNA sequenceShow/hide mRNA sequence
ATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGCGTGGAATCATGGAAGGTAGATATGGAAAGGGAGACTGTGGTTGTTACCGGAGA
TGTTTTTCCTTTTGAAGTCATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAAGTT
Protein sequenceShow/hide protein sequence
MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV