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CSPI02G01500 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G01500
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReticulon-like protein
Genome locationChr2:1051449..1051739
RNA-Seq ExpressionCSPI02G01500
SyntenyCSPI02G01500
Gene Ontology termsGO:0009617 - response to bacterium (biological process)
GO:0005643 - nuclear pore (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60674.2 hypothetical protein Csa_023916, partial [Cucumis sativus]9.4e-3897.65Show/hide
Query:  GVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGKRTANLSLCFSNSIFFFIPKSDHK
        GVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGA KRTANLSLCFSNS+FFFIPKSDHK
Subjt:  GVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGKRTANLSLCFSNSIFFFIPKSDHK

XP_008458672.1 PREDICTED: reticulon-like protein B2 [Cucumis melo]8.3e-1878.08Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MAD SETVQ K VEIADDNINNDQQ IT SPP  SNSDK+D SP   PEDEAAESS+ML+KKQ VHRVLG+GK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK

XP_011656361.2 reticulon-like protein B5 [Cucumis sativus]5.7e-1979.45Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MADSSETVQ K VEIADDNINNDQ  IT SPPP SN +KMD S  L PEDE AESSQML+KKQ VHRVLGAGK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK

XP_038907010.1 reticulon-like protein B2 [Benincasa hispida]7.3e-0654.79Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MA+ SET + K VEIAD           L   P SNSD++D SP L  E+ AAE S+ML KKQ VHRVLGAGK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK

TrEMBL top hitse value%identityAlignment
A0A0A0KBC8 Reticulon-like protein2.8e-1979.45Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MADSSETVQ K VEIADDNINNDQ  IT SPPP SN +KMD S  L PEDE AESSQML+KKQ VHRVLGAGK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK

A0A1S3C9M8 Reticulon-like protein4.0e-1878.08Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MAD SETVQ K VEIADDNINNDQQ IT SPP  SNSDK+D SP   PEDEAAESS+ML+KKQ VHRVLG+GK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK

A0A5D3CRK8 Reticulon-like protein4.0e-1878.08Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MAD SETVQ K VEIADDNINNDQQ IT SPP  SNSDK+D SP   PEDEAAESS+ML+KKQ VHRVLG+GK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTCTTCTGAAACCGTACAAACTAAGGGGGTGGAAATCGCCGATGATAATATTAACAATGATCAACAACTCATTACTCTATCTCCCCCGCCGTTCTCTAATTC
CGACAAAATGGACGATTCTCCGTCGCTTCTGCCAGAGGACGAGGCAGCGGAGAGTTCTCAAATGTTAAAGAAAAAGCAACATGTTCATCGTGTTCTTGGCGCCGGAAAGC
GTACGGCTAATCTCTCTTTGTGTTTTTCCAATTCTATATTTTTTTTCATCCCTAAAAGTGACCATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTCTTCTGAAACCGTACAAACTAAGGGGGTGGAAATCGCCGATGATAATATTAACAATGATCAACAACTCATTACTCTATCTCCCCCGCCGTTCTCTAATTC
CGACAAAATGGACGATTCTCCGTCGCTTCTGCCAGAGGACGAGGCAGCGGAGAGTTCTCAAATGTTAAAGAAAAAGCAACATGTTCATCGTGTTCTTGGCGCCGGAAAGC
GTACGGCTAATCTCTCTTTGTGTTTTTCCAATTCTATATTTTTTTTCATCCCTAAAAGTGACCATAAATGA
Protein sequenceShow/hide protein sequence
MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGKRTANLSLCFSNSIFFFIPKSDHK