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CSPI02G01560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G01560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationChr2:1091404..1092790
RNA-Seq ExpressionCSPI02G01560
SyntenyCSPI02G01560
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061590.1 putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa]5.7e-7096.69Show/hide
Query:  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH
        MCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCY+CNSNAYKSLDIGALPGWKSGDWICSRIGCETH
Subjt:  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH

Query:  NYASRMECYKCKAPRHFGGAV
        NYASRMECYKCK PR FGGAV
Subjt:  NYASRMECYKCKAPRHFGGAV

TYJ97799.1 putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa]2.0e-7097.52Show/hide
Query:  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH
        MCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCY+CNSNAYKSLDIGALPGWKSGDWICSRIGCETH
Subjt:  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH

Query:  NYASRMECYKCKAPRHFGGAV
        NYASRMECYKCKAPR FGGAV
Subjt:  NYASRMECYKCKAPRHFGGAV

XP_004139322.1 zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus]7.9e-80100Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW

Query:  ICSRIGCETHNYASRMECYKCKAPRHFGGAV
        ICSRIGCETHNYASRMECYKCKAPRHFGGAV
Subjt:  ICSRIGCETHNYASRMECYKCKAPRHFGGAV

XP_008457786.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]1.7e-7796.95Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCY+CNSNAYKSLDIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW

Query:  ICSRIGCETHNYASRMECYKCKAPRHFGGAV
        ICSRIGCETHNYASRMECYKCK PR FGGAV
Subjt:  ICSRIGCETHNYASRMECYKCKAPRHFGGAV

XP_038890693.1 zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida]4.8e-6990.08Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+ YDQY  IHSK TDEVLAGDWYCNCGAHNYASRS+CY+C  NAYK+LD+GALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW

Query:  ICSRIGCETHNYASRMECYKCKAPRHFGGAV
        IC+RIGCETHNYASRMECYKCKAPR FGGAV
Subjt:  ICSRIGCETHNYASRMECYKCKAPRHFGGAV

TrEMBL top hitse value%identityAlignment
A0A0A0LIX1 Uncharacterized protein2.1e-78100Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW

Query:  ICSRIGCETHNYASRMECYKCKAPRHFG
        ICSRIGCETHNYASRMECYKCKAPRHFG
Subjt:  ICSRIGCETHNYASRMECYKCKAPRHFG

A0A1S3C6B6 uncharacterized RNA-binding protein C17H9.04c8.0e-7896.95Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCY+CNSNAYKSLDIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDW

Query:  ICSRIGCETHNYASRMECYKCKAPRHFGGAV
        ICSRIGCETHNYASRMECYKCK PR FGGAV
Subjt:  ICSRIGCETHNYASRMECYKCKAPRHFGGAV

A0A5A7V2V3 Putative RNA-binding protein C17H9.04c2.8e-7096.69Show/hide
Query:  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH
        MCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCY+CNSNAYKSLDIGALPGWKSGDWICSRIGCETH
Subjt:  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH

Query:  NYASRMECYKCKAPRHFGGAV
        NYASRMECYKCK PR FGGAV
Subjt:  NYASRMECYKCKAPRHFGGAV

A0A5D3BFH7 Putative RNA-binding protein C17H9.04c9.5e-7197.52Show/hide
Query:  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH
        MCGVCEHVNFKKREACQRCGYPKYGGPDP+TYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCY+CNSNAYKSLDIGALPGWKSGDWICSRIGCETH
Subjt:  MCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH

Query:  NYASRMECYKCKAPRHFGGAV
        NYASRMECYKCKAPR FGGAV
Subjt:  NYASRMECYKCKAPRHFGGAV

A0A6J1CPG4 uncharacterized RNA-binding protein C17H9.04c-like2.3e-6481.82Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLD-IGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY+ +   H      +LAGDWYCNCGAHNYASRS+CY+CNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLD-IGALPGWKSGD

Query:  WICSRIGCETHNYASRMECYKCKAPRHFGGAV
        WIC+RIGCE HNYASRMECYKC  PR FGGAV
Subjt:  WICSRIGCETHNYASRMECYKCKAPRHFGGAV

SwissProt top hitse value%identityAlignment
O95218 Zinc finger Ran-binding domain-containing protein 21.6e-0635.48Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD
        N   S GDW+C    C +VNF +R +C RCG  K             I   +  KS     A DW C  C   N+A RS C  CN+  Y  L+
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD

Q19QU3 Zinc finger Ran-binding domain-containing protein 21.6e-0635.48Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD
        N   S GDW+C    C +VNF +R +C RCG  K             I   +  KS     A DW C  C   N+A RS C  CN+  Y  L+
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD

Q5R580 Zinc finger Ran-binding domain-containing protein 21.6e-0635.48Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD
        N   S GDW+C    C +VNF +R +C RCG  K             I   +  KS     A DW C  C   N+A RS C  CN+  Y  L+
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 23.2e-0736.56Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD
        N   S GDW+C    C +VNF +R +C RCG  K             I   +  KS     A DW C  CG  N+A RS C  CN+  Y  L+
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD

Q9R020 Zinc finger Ran-binding domain-containing protein 21.6e-0635.48Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD
        N   S GDW+C    C +VNF +R +C RCG  K             I   +  KS     A DW C  C   N+A RS C  CN+  Y  L+
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI---IHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLD

Arabidopsis top hitse value%identityAlignment
AT1G48570.1 zinc finger (Ran-binding) family protein1.5e-1232.77Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIG
        GDW+C  C  +NF + ++C +C   K  GP  T+    NI+  K       GDW C  CG  N+AS   C +C    +K+L        + GDW C    
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYC-NCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIG

Query:  CETHNYASRMECYKCKAPR
        C+  N+     C KC+  R
Subjt:  CETHNYASRMECYKCKAPR

AT2G17975.1 zinc finger (Ran-binding) family protein3.3e-1526.44Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYDQYN--IIHSKSTD------EVLAGDWYCNCGAHNYASRSSCYKC
        GDW+C  C + N+  RE C++CG  K                    Y    P ++DQ    +  S +T+      E  +GDW C CG HNY+SR  C KC
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYDQYN--IIHSKSTD------EVLAGDWYCNCGAHNYASRSSCYKC

Query:  N--------------------------SNAYKSLD-----IGALPG-------------------------------WKSGDWICSRIGCETHNYASRME
        N                          +  Y S+        + PG                               W+ GDW+C+   C+ HNYASR E
Subjt:  N--------------------------SNAYKSLD-----IGALPG-------------------------------WKSGDWICSRIGCETHNYASRME

Query:  CYKCKAPR
        C +CK  R
Subjt:  CYKCKAPR

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein2.3e-4554.17Show/hide
Query:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYC---NCGAHNYASRSSCYKC--------------NSNAYK
        M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY  YN        EV+AGDWYC   NCG+HNYASR+SCY+C                 AY 
Subjt:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYC---NCGAHNYASRSSCYKC--------------NSNAYK

Query:  SLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRHFGG
        +      PGWK+GDW+C R+GC  HNYASR EC+KCK  R +GG
Subjt:  SLDIGALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRHFGG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein1.0e-2941.56Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI-------IHSKSTDEVLAGDWYC---NCGAHNYASRSSCYKCNS----------------
        GDW C  C H+NF++R++CQRCG  + G       D  N            +  +V  GDWYC   NCG HN+ASRS+C+KC +                
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNI-------IHSKSTDEVLAGDWYC---NCGAHNYASRSSCYKCNS----------------

Query:  NAYKSLDI--------GALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRHF
         A    DI        G    WKSGDWIC+RIGC  HN+ASRMEC++C APR F
Subjt:  NAYKSLDI--------GALPGWKSGDWICSRIGCETHNYASRMECYKCKAPRHF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein5.7e-2836.08Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQY------NIIHSKSTDEVLAGDWYCN---CGAHNYASRSSCYKCN-------------SNAYK
        GDW C +C H+NF++R++CQRC  P+ GG        +      +     +  +V  GDWYCN   CG HN+A+RSSC+KC              +  + 
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQY------NIIHSKSTDEVLAGDWYCN---CGAHNYASRSSCYKCN-------------SNAYK

Query:  SLDIGALPG------------------WKSGDWICSRIGCETHNYASRMECYKCKAPR
         +++G   G                  WKSGDWIC R GC  HN+ASR EC++C AP+
Subjt:  SLDIGALPG------------------WKSGDWICSRIGCETHNYASRMECYKCKAPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATGAATTGGTCAGGAGGAGATTGGATGTGTGGTGTTTGTGAACATGTAAACTTCAAGAAAAGAGAAGCCTGTCAAAGATGTGGATATCCAAAATATGGAGGCCC
TGACCCAACAACATATGATCAATACAATATCATTCATTCTAAAAGCACAGATGAAGTGTTGGCTGGTGATTGGTATTGCAATTGTGGAGCTCATAACTATGCTAGTAGAT
CATCTTGTTATAAATGTAATAGTAATGCTTATAAAAGTCTTGATATCGGTGCTTTGCCTGGTTGGAAATCTGGCGATTGGATCTGCTCTAGAATAGGATGTGAAACCCAC
AATTATGCCAGTAGAATGGAATGTTACAAATGCAAAGCTCCAAGGCATTTTGGAGGAGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
TCCAAATTCAAACTTACACACACACCAAATTAACAAACAACCCTTTTAGTTTCATCATAAACACACAACACTTGATCATCAAGCTAAGCTAGAGATCAGAGATATGAATA
TGAATTGGTCAGGAGGAGATTGGATGTGTGGTGTTTGTGAACATGTAAACTTCAAGAAAAGAGAAGCCTGTCAAAGATGTGGATATCCAAAATATGGAGGCCCTGACCCA
ACAACATATGATCAATACAATATCATTCATTCTAAAAGCACAGATGAAGTGTTGGCTGGTGATTGGTATTGCAATTGTGGAGCTCATAACTATGCTAGTAGATCATCTTG
TTATAAATGTAATAGTAATGCTTATAAAAGTCTTGATATCGGTGCTTTGCCTGGTTGGAAATCTGGCGATTGGATCTGCTCTAGAATAGGATGTGAAACCCACAATTATG
CCAGTAGAATGGAATGTTACAAATGCAAAGCTCCAAGGCATTTTGGAGGAGCTGTTTGAAAGTTGTGGAAAGCTGACTTAGGAAGAACTATTTTGGTGATGCTAAATATT
TGGCCAACTTACAAGCTTCCAGCATCTGATGCTCTCTCCAATTTGCTTCTTTCTGTTTTGCCCTTTTTTCAAGAGATTGGGACTTAATGCATGAAAAGCTCAACAATTCC
CATTCTTAAATTAATCTCACATTTCACTAATTAATTAGAATTATTATTCAATTTT
Protein sequenceShow/hide protein sequence
MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGDWYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETH
NYASRMECYKCKAPRHFGGAV