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CSPI02G01600 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G01600
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDynein light chain
Genome locationChr2:1124873..1126449
RNA-Seq ExpressionCSPI02G01600
SyntenyCSPI02G01600
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
InterPro domainsIPR001372 - Dynein light chain, type 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061594.1 dynein light chain [Cucumis melo var. makuwa]5.3e-6189.86Show/hide
Query:  MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG
        MATLNKQMKGFKSFYKSRD GGRNVSSREP+S SS+DKTSIYKYNWLGRKSKKAT+QH        GGGG GG+GEEIMGGRKVVVEGRKSVSHVETNLG
Subjt:  MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG

Query:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK
        SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK
Subjt:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK

KAG7030397.1 hypothetical protein SDJN02_08744, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-4773.83Show/hide
Query:  MATLNKQMKGFKSFYKSRDGG-RNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG
        MA+LNKQMKGFKSFYKSRDG   NV +R P+SMSS+DKTS+YKYNWL  KSKKA++Q+GGGGG G              GGR VVVEGRKSVS VETNL 
Subjt:  MATLNKQMKGFKSFYKSRDGG-RNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG

Query:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
        SVA+FLQVKVLVSDMPE+MQ++AFRTARRSYDSLEKFSSK+MAYNIKK+
Subjt:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK

XP_008457739.1 PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo]4.1e-6189.26Show/hide
Query:  MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG
        MATLNKQMKGFKSFYKSRD GGRNVSSREP+S SS+DKTSIYKYNWLGRKSKKAT+QH        GGGG GG+GEEIMGGRKVVVEGRKSVSHVETNLG
Subjt:  MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG

Query:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
        SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK+
Subjt:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK

XP_031736570.1 uncharacterized protein LOC101208065 [Cucumis sativus]1.2e-6897.3Show/hide
Query:  MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLGS
        MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSS+DKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGG+ EEIMGGRKVVVEGRKSVSHVETNLGS
Subjt:  MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLGS

Query:  VASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
        VASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK+
Subjt:  VASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK

XP_038890919.1 uncharacterized protein LOC120080348 [Benincasa hispida]5.5e-5884.46Show/hide
Query:  MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLGS
        M TLNKQMKGFKSFYKSRDGGRNV +REP+S SSMDKTSIYKYNWLGRK+KKAT+QHG G             GEEIMGGRKVVVEGRKSVSHVETNLGS
Subjt:  MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLGS

Query:  VASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
        VA+FLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK+
Subjt:  VASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LKY0 Uncharacterized protein1.3e-6594.59Show/hide
Query:  MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLGS
        MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSS+DKTSIYKYNWLGRKSKKATEQH    GGGGGGGGVGG+ EEIMGGRKVVVEGRKSVSHVETNLGS
Subjt:  MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLGS

Query:  VASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
        VASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK+
Subjt:  VASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK

A0A1S3C671 uncharacterized protein LOC1034973572.0e-6189.26Show/hide
Query:  MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG
        MATLNKQMKGFKSFYKSRD GGRNVSSREP+S SS+DKTSIYKYNWLGRKSKKAT+QH        GGGG GG+GEEIMGGRKVVVEGRKSVSHVETNLG
Subjt:  MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG

Query:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
        SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK+
Subjt:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK

A0A5D3BEW1 Dynein light chain2.6e-6189.86Show/hide
Query:  MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG
        MATLNKQMKGFKSFYKSRD GGRNVSSREP+S SS+DKTSIYKYNWLGRKSKKAT+QH        GGGG GG+GEEIMGGRKVVVEGRKSVSHVETNLG
Subjt:  MATLNKQMKGFKSFYKSRD-GGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG

Query:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK
        SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK
Subjt:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKK

A0A6J1CN34 uncharacterized protein LOC1110131138.9e-4674.67Show/hide
Query:  MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGG-GGGGGGGVGGVGEEIMGGRK-VVVEGRKSVSHVETNL
        MATLNKQ+KGFKSFYKSRDG R+ ++ +P   + +D+  +YKYNWLGRKSKKAT+QHGG  G  GGGGGG GG G   MGGRK +VVEGRKSVSHVETNL
Subjt:  MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGG-GGGGGGGVGGVGEEIMGGRK-VVVEGRKSVSHVETNL

Query:  GSVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
         SVA+FLQVKVLVSDMPE+MQ+QAFR+ARRSYDSLEKFSSKHMA++IKK+
Subjt:  GSVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK

A0A6J1G363 uncharacterized protein LOC1114503661.4e-4672.48Show/hide
Query:  MATLNKQMKGFKSFYKSRDGG-RNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG
        MA+LNKQMKGFKSFYKSRDG   NV +R  +SMSS+DKTS+YKYNWL  KSKK ++Q+GGGGG                GGRKVVVEGRKSVS VETNL 
Subjt:  MATLNKQMKGFKSFYKSRDGG-RNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLG

Query:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
        SVA+FLQVKVLVSDMPE+MQ++AFRTARRSYDSLEKFSSK+MAYNIKK+
Subjt:  SVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G20110.1 Dynein light chain type 1 family protein2.0e-1358.21Show/hide
Query:  EGRKSVSHVE----TNLGSVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK
        EGRKSVSHVE      + + A  L V++L +DMP  MQ  AFR AR + DSLEKFSSKHMA+N+KK+
Subjt:  EGRKSVSHVE----TNLGSVASFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCTAAACAAGCAAATGAAAGGCTTCAAATCCTTCTACAAGTCTCGCGATGGAGGTCGTAATGTATCGTCACGCGAACCTATTTCTATGAGTTCAATGGATAA
GACATCAATTTATAAGTACAACTGGTTGGGTAGGAAATCCAAGAAAGCAACTGAACAACATGGTGGTGGTGGTGGCGGTGGCGGTGGCGGTGGTGGTGTCGGGGGCGTCG
GAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAAATTTGGGGTCAGTAGCATCCTTTCTTCAAGTGAAGGTATTG
GTATCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAA
GAAACTAAGTTTTGAGACAGAATTCAAGTGGGCATTTGGTCAAAGGATCCGACAGCCCATGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAG
TTTTGGATCATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTCTAAACAAGCAAATGAAAGGCTTCAAATCCTTCTACAAGTCTCGCGATGGAGGTCGTAATGTATCGTCACGCGAACCTATTTCTATGAGTTCAATGGATAA
GACATCAATTTATAAGTACAACTGGTTGGGTAGGAAATCCAAGAAAGCAACTGAACAACATGGTGGTGGTGGTGGCGGTGGCGGTGGCGGTGGTGGTGTCGGGGGCGTCG
GAGAGGAGATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAATCAGTTTCTCATGTGGAAACAAATTTGGGGTCAGTAGCATCCTTTCTTCAAGTGAAGGTATTG
GTATCAGATATGCCTGAAATTATGCAAATTCAAGCTTTTAGAACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTTAGCTCAAAACATATGGCTTACAATATTAAAAA
GAAACTAAGTTTTGAGACAGAATTCAAGTGGGCATTTGGTCAAAGGATCCGACAGCCCATGAATTTGATAAAGTATATGGGCCAGCTTGGCATTGTATTGTGGGGTCAAG
TTTTGGATCATTTGTGA
Protein sequenceShow/hide protein sequence
MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSMDKTSIYKYNWLGRKSKKATEQHGGGGGGGGGGGGVGGVGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVL
VSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKKLSFETEFKWAFGQRIRQPMNLIKYMGQLGIVLWGQVLDHL