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CSPI02G01620 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G01620
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAlba domain-containing protein
Genome locationChr2:1135449..1137297
RNA-Seq ExpressionCSPI02G01620
SyntenyCSPI02G01620
Gene Ontology termsGO:0006189 - 'de novo' IMP biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599408.1 hypothetical protein SDJN03_09186, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5692.37Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+S+NL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHD VELSALGMAIATVVTVAEILKNNGLA+EKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EILLGKTENFDELMAAAAEER E G+ADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

XP_004139317.1 uncharacterized protein At2g34160 [Cucumis sativus]3.7e-61100Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EILLGKTENFDELMAAAAEERGEIGEADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

XP_008457716.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]1.8e-6098.47Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EILLGKTENFDELMAAAAEERGEIG+ADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

XP_023547053.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]1.6e-5693.13Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SINL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHD VELSALGMAIATVVTVAEILKNNGLA+EKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EILLGKTENFDELMAAAAEER E G+ADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

XP_038890892.1 uncharacterized protein At2g34160-like [Benincasa hispida]8.5e-5894.03Show/hide
Query:  MEEIVEGVNSINLSS---DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQK
        MEEIVEGVNS+NLSS   DS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQK
Subjt:  MEEIVEGVNSINLSS---DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQK

Query:  AKIEILLGKTENFDELMAAAAEERGEIGEADEQS
        AKIEILLGKT+NFDELMAAAAEERGEIG+ADEQS
Subjt:  AKIEILLGKTENFDELMAAAAEERGEIGEADEQS

TrEMBL top hitse value%identityAlignment
A0A1S3C651 uncharacterized protein At2g34160-like8.9e-6198.47Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EILLGKTENFDELMAAAAEERGEIG+ADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

A0A5D3BH52 DNA/RNA-binding protein Alba-like protein8.9e-6198.47Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EILLGKTENFDELMAAAAEERGEIG+ADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

A0A6J1CNW3 uncharacterized protein At2g34160-like3.0e-5690.84Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGL +EKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EILLGKTENFDELMAAAAEERG+ G+ DEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

A0A6J1G312 uncharacterized protein At2g34160-like1.7e-5692.37Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+S+NL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHD VELSALGMAIATVVTVAEILKNNGLA+EKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EILLGKTENFDELMAAAAEER E G+ADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

A0A6J1KJN4 uncharacterized protein At2g34160-like5.0e-5691.6Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+S+NL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQHD VELSALGMAIATVVTVAEILKNNGLA+EKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EI LGKTENFDELMAAAAEER E G+ADEQS
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341601.1e-4779.39Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN++NL++DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+++VELSALGMAIATVVTV EILKNNG A+EKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EI L K+E FDELMAAA EE+ E  EA  Q+
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein1.8e-5081.68Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI EGVN++NL+ D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTVAEILKNNG A+EKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EI L K+E FDELMAAA EE+ E  EA EQ+
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

AT2G34160.1 Alba DNA/RNA-binding protein7.7e-4979.39Show/hide
Query:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN++NL++DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+++VELSALGMAIATVVTV EILKNNG A+EKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EILLGKTENFDELMAAAAEERGEIGEADEQS
        EI L K+E FDELMAAA EE+ E  EA  Q+
Subjt:  EILLGKTENFDELMAAAAEERGEIGEADEQS

AT3G04620.1 Alba DNA/RNA-binding protein1.5e-3666.38Show/hide
Query:  DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMA
        ++ KKNRIQVSNTKKPLFFYVNLAKRY+QQH+EVELSALGMAI TVVT++EILKNNGLA EKK+ TSTV +KD+++G+ VQKAKIEI+LGK++ FD L+ 
Subjt:  DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENFDELMA

Query:  AAAEERGEIGEADEQS
             +    EA  ++
Subjt:  AAAEERGEIGEADEQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATTGTTGAAGGCGTGAATTCCATCAACTTGAGTTCCGATTCGTTTAAAAAGAATCGGATTCAAGTGTCCAACACCAAGAAACCCTTGTTCTTCTATGTCAA
TCTCGCCAAGAGGTACATGCAGCAGCATGATGAGGTTGAACTTTCTGCTCTGGGAATGGCAATAGCCACAGTTGTTACAGTTGCTGAAATTTTGAAAAACAATGGATTGG
CTCTCGAGAAGAAGATTGCAACCTCAACTGTTGACATCAAGGATGACTCAAGAGGAAGACCTGTCCAGAAGGCTAAGATTGAGATATTGCTGGGTAAAACCGAAAACTTC
GATGAATTGATGGCTGCTGCTGCTGAGGAAAGGGGGGAGATAGGCGAAGCAGACGAGCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
CCACAATTAGCCCGAAGAACTAGGGTTTTGAGGTGCAAATTTTTTAGGGTTTTTGCGAGGTCGAGGAAAACACCCTAATGGAAGAAATTGTTGAAGGCGTGAATTCCATC
AACTTGAGTTCCGATTCGTTTAAAAAGAATCGGATTCAAGTGTCCAACACCAAGAAACCCTTGTTCTTCTATGTCAATCTCGCCAAGAGGTACATGCAGCAGCATGATGA
GGTTGAACTTTCTGCTCTGGGAATGGCAATAGCCACAGTTGTTACAGTTGCTGAAATTTTGAAAAACAATGGATTGGCTCTCGAGAAGAAGATTGCAACCTCAACTGTTG
ACATCAAGGATGACTCAAGAGGAAGACCTGTCCAGAAGGCTAAGATTGAGATATTGCTGGGTAAAACCGAAAACTTCGATGAATTGATGGCTGCTGCTGCTGAGGAAAGG
GGGGAGATAGGCGAAGCAGACGAGCAGAGTTAAAAGATGGATTACATTTGCTGTATCTTTTTATTTTAGCTATAAATTTTGTCGATGATGTTGAATTTTCCATCAATTAT
TTGTAGCTCTTTACGGCACTATTTTTCAATTGTGAGTTTGTTCATAAATTTCGCTTTAGGGATCTTCACATTTTCTTTGGAGTCTTTCTTTTTAACCTATAGAAAACCAA
ATTTTGTATTGTTATTTTTTTGCTACAAATCATTTGCTTTATTTTTTCTTCTTTGTACCAATTTTAATTTGCCTAAACATTTATAGAATGTAGTGTTGATTGTGATTGGT
TTGTC
Protein sequenceShow/hide protein sequence
MEEIVEGVNSINLSSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLALEKKIATSTVDIKDDSRGRPVQKAKIEILLGKTENF
DELMAAAAEERGEIGEADEQS