; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G02690 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G02690
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionVQ domain-containing protein
Genome locationChr2:1867255..1867748
RNA-Seq ExpressionCSPI02G02690
SyntenyCSPI02G02690
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063578.1 hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]1.0e-2488.16Show/hide
Query:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC
        MMIKAS+ALEFRAIVQQLTGFDSN TPTRRRNQK +SDCARTPS+MFHADR EMEVLKFSDD HM SLLQFD QGC
Subjt:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC

KAG6599333.1 hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3261.15Show/hide
Query:  MGKCGENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
        MGKCGEN++ +      Q Q+QNPTKVQRKPIKVKYISSPMMIKASNA EFRAIVQQLTGF S++PTRR N K     A+TPS        +ME LK SD
Subjt:  MGKCGENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD

Query:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
          +M SLL+FD + CF T   +N+L NN M FQ+SC FQ
Subjt:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ

KGN60779.1 hypothetical protein Csa_019238 [Cucumis sativus]8.4e-7298.56Show/hide
Query:  MGKCGENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
        MGKCGENQYTNHNH+ SQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
Subjt:  MGKCGENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD

Query:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
        DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
Subjt:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ

XP_010102262.1 sigma factor binding protein 1, chloroplastic [Morus notabilis]7.8e-0944.44Show/hide
Query:  GENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHH
        G +QY N+ H  SQ Q   P+K ++KPIK+KYISSPMM++A+NA EFRAIVQ+LTG +SN      +        RT +    +D  +    +FS D+H
Subjt:  GENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHH

XP_021282108.1 uncharacterized protein LOC110414990 [Herrania umbratica]3.5e-0939.2Show/hide
Query:  NHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQG
        +H   +++NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +S+          L + A    + FH D    +V    DD  +    Q D   
Subjt:  NHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQG

Query:  C-FETQNNNNILPNNIMEFQSSCFF
          F+       +P N+  FQS   F
Subjt:  C-FETQNNNNILPNNIMEFQSSCFF

TrEMBL top hitse value%identityAlignment
A0A0A0LIA7 VQ domain-containing protein4.1e-7298.56Show/hide
Query:  MGKCGENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
        MGKCGENQYTNHNH+ SQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
Subjt:  MGKCGENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD

Query:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
        DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
Subjt:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ

A0A1R3HNT0 VQ motif-containing protein1.2e-0738.61Show/hide
Query:  HNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHME-SLLQF
        H+H++   +++NPTKV++ PIKV YI SP M+K SNA EFRAIVQ+LTG +S+T  +  N    +   +  +   H    +++     D   ++ S L+F
Subjt:  HNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHME-SLLQF

Query:  D
        D
Subjt:  D

A0A5A7V7M1 VQ domain-containing protein4.9e-2588.16Show/hide
Query:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC
        MMIKAS+ALEFRAIVQQLTGFDSN TPTRRRNQK +SDCARTPS+MFHADR EMEVLKFSDD HM SLLQFD QGC
Subjt:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC

A0A6J1A533 uncharacterized protein LOC1104149901.7e-0939.2Show/hide
Query:  NHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQG
        +H   +++NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +S+          L + A    + FH D    +V    DD  +    Q D   
Subjt:  NHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQG

Query:  C-FETQNNNNILPNNIMEFQSSCFF
          F+       +P N+  FQS   F
Subjt:  C-FETQNNNNILPNNIMEFQSSCFF

W9RT96 VQ domain-containing protein3.8e-0944.44Show/hide
Query:  GENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHH
        G +QY N+ H  SQ Q   P+K ++KPIK+KYISSPMM++A+NA EFRAIVQ+LTG +SN      +        RT +    +D  +    +FS D+H
Subjt:  GENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGTGTGGAGAGAATCAATACACCAACCACAACCACAACCACAGCCAAAGCCAAAACCAAAACCCTACAAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACAT
TTCAAGTCCAATGATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCTTTGACTCCAATACTCCTACTCGCCGGAGGAACCAGAAAT
TGCTCTCCGACTGTGCCCGAACTCCATCTGCAATGTTTCATGCAGATCGTCATGAAATGGAAGTTTTGAAGTTCTCAGATGATCATCACATGGAGTCGCTCCTCCAATTT
GATGGTCAAGGTTGTTTTGAAACACAGAATAATAACAATATTCTTCCCAACAACATTATGGAGTTTCAATCTTCTTGTTTTTTTCAATAG
mRNA sequenceShow/hide mRNA sequence
CAATATTATATATAGAACCCAATTCTTTGTTCAAAAGCAAGAGAGAGATATCTCTCTCTTTCTAACTCTCTCTAATGGGGAAGTGTGGAGAGAATCAATACACCAACCAC
AACCACAACCACAGCCAAAGCCAAAACCAAAACCCTACAAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCACT
TGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCTTTGACTCCAATACTCCTACTCGCCGGAGGAACCAGAAATTGCTCTCCGACTGTGCCCGAACTCCATCTGCAATGT
TTCATGCAGATCGTCATGAAATGGAAGTTTTGAAGTTCTCAGATGATCATCACATGGAGTCGCTCCTCCAATTTGATGGTCAAGGTTGTTTTGAAACACAGAATAATAAC
AATATTCTTCCCAACAACATTATGGAGTTTCAATCTTCTTGTTTTTTTCAATAG
Protein sequenceShow/hide protein sequence
MGKCGENQYTNHNHNHSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQF
DGQGCFETQNNNNILPNNIMEFQSSCFFQ