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CSPI02G02790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G02790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAlba domain-containing protein
Genome locationChr2:1933802..1935256
RNA-Seq ExpressionCSPI02G02790
SyntenyCSPI02G02790
Gene Ontology termsGO:0048235 - pollen sperm cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139384.1 uncharacterized protein At2g34160 [Cucumis sativus]3.9e-64100Show/hide
Query:  MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE
        MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE
Subjt:  MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE

Query:  IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
Subjt:  IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

XP_008456222.1 PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]2.1e-6298.58Show/hide
Query:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        LGKSEKFDSLMTAATAVPETVVAVAAA EEEKKAEE+KEEQ
Subjt:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

XP_022946134.1 uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata]1.1e-5384.08Show/hide
Query:  ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
        AT+AVSGAT          ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
Subjt:  ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL

Query:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAA-------AEEEKKAEESKEEQ
        VQKAKIEIVLGKSEKFDSLMTAAT VPE  VA A A       A EEKK EESKEEQ
Subjt:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAA-------AEEEKKAEESKEEQ

XP_023521159.1 uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo]3.1e-5382.32Show/hide
Query:  ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
        AT+AVSGAT          ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
Subjt:  ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL

Query:  VQKAKIEIVLGKSEKFDSLMTAATAVPE-------------TVVAVAA-AAEEEKKAEESKEEQ
        VQKAKIEIVLGKSEKFDSLMTAATAVPE             TV A AA AA EEKK EESKEEQ
Subjt:  VQKAKIEIVLGKSEKFDSLMTAATAVPE-------------TVVAVAA-AAEEEKKAEESKEEQ

XP_038877259.1 uncharacterized protein At2g34160-like [Benincasa hispida]6.7e-5693.01Show/hide
Query:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVP---ETVVAVAAAAEEEKKAEESKEE
        LGKSEKFDSLMTAATAVP   ETV   AAAAEEEKKAEE+KE+
Subjt:  LGKSEKFDSLMTAATAVP---ETVVAVAAAAEEEKKAEESKEE

TrEMBL top hitse value%identityAlignment
A0A0A0LG69 Alba domain-containing protein1.9e-64100Show/hide
Query:  MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE
        MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE
Subjt:  MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE

Query:  IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
Subjt:  IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

A0A1S3C2U1 uncharacterized protein At2g341601.0e-6298.58Show/hide
Query:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        LGKSEKFDSLMTAATAVPETVVAVAAA EEEKKAEE+KEEQ
Subjt:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

A0A5D3D4G4 Alba DNA/RNA-binding protein1.0e-6298.58Show/hide
Query:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        LGKSEKFDSLMTAATAVPETVVAVAAA EEEKKAEE+KEEQ
Subjt:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

A0A6J1G2Y0 uncharacterized protein At2g34160-like isoform X15.2e-5484.08Show/hide
Query:  ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
        AT+AVSGAT          ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
Subjt:  ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL

Query:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAA-------AEEEKKAEESKEEQ
        VQKAKIEIVLGKSEKFDSLMTAAT VPE  VA A A       A EEKK EESKEEQ
Subjt:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAA-------AEEEKKAEESKEEQ

A0A6J1KEC8 uncharacterized protein At2g34160 isoform X11.5e-5381.48Show/hide
Query:  ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
        AT+AVSGAT          ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
Subjt:  ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL

Query:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAA------------AAEEEKKAEESKEEQ
        VQKAKIEIVLGKSEKFDSLMTAAT VPE  VA  A            AA EEKK EESKEEQ
Subjt:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAA------------AAEEEKKAEESKEEQ

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341601.5e-3770.49Show/hide
Query:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L
Subjt:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVA
         KSEKFD LM AA    E   A
Subjt:  GKSEKFDSLMTAATAVPETVVA

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein3.5e-3965.47Show/hide
Query:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG A EKK++TSTV +KD+++GR VQKAKIEI L
Subjt:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEE
         KSEKFD LM              AAA EEK+A E++E+
Subjt:  GKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEE

AT2G34160.1 Alba DNA/RNA-binding protein1.0e-3870.49Show/hide
Query:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L
Subjt:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVA
         KSEKFD LM AA    E   A
Subjt:  GKSEKFDSLMTAATAVPETVVA

AT3G04620.1 Alba DNA/RNA-binding protein2.8e-4474.64Show/hide
Query:  AVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK
        A +  T   ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGK
Subjt:  AVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK

Query:  SEKFDSLMTAAT--AVPETVVAVAAAAEEEKKAEESKE
        S+KFDSL+   T    PE      A+AE E   E  +E
Subjt:  SEKFDSLMTAAT--AVPETVVAVAAAAEEEKKAEESKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGACGATTGCTGTCTCGGGAGCCACACCCGCCACTGAAACACAAAAGAAGAACAGAATTCAGGTTTCTAATACCAAGAAGCCCCTCTTCTTCTACGTTAATCT
TGCTAAGAGGTATATTCAACAGCATAATGAAGTTGAGCTTTCTGCCTTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTTAAGAACAATGGGCTGGCTA
CAGAAAAGAAAGTTTTGACTTCTACAGTCGGCATGAAAGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCTAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAGTTTGAT
TCTCTGATGACTGCGGCCACGGCAGTACCGGAGACAGTGGTGGCAGTTGCAGCAGCTGCTGAGGAAGAGAAGAAAGCAGAGGAAAGCAAGGAGGAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
CTTCGTTCTCCCCTCCCATTCATTTTTCCCGCTCCTTCCAATTTTCCCCCATAATATTCCTCAACAATCCAATCTCTTCCCTCTCTTTCTTTCTTTCCATCTGCTTTCCA
GATACACACACACACCCAATTTTGTTTTACTCACTGAGAAAGTGGAAAATTTAGCAATGGCCGCGACGATTGCTGTCTCGGGAGCCACACCCGCCACTGAAACACAAAAG
AAGAACAGAATTCAGGTTTCTAATACCAAGAAGCCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTATATTCAACAGCATAATGAAGTTGAGCTTTCTGCCTTGGGAAT
GGCAATCACTACTGTTGTCACAATTGCGGAGATTCTTAAGAACAATGGGCTGGCTACAGAAAAGAAAGTTTTGACTTCTACAGTCGGCATGAAAGATGAGAACAAAGGTC
GTTTGGTTCAGAAAGCTAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAGTTTGATTCTCTGATGACTGCGGCCACGGCAGTACCGGAGACAGTGGTGGCAGTTGCAGCA
GCTGCTGAGGAAGAGAAGAAAGCAGAGGAAAGCAAGGAGGAGCAGTAGGGGGAAAGAGAGAAAGGAATGTGATGTTACATTGTTGTAGTTTAAGAATCACATTTGCAATA
TTATAGGATAGGCTATTTTCATTTGAAATTCCTCTACTAGTTTTTTGCCTCTTTCTGAACAGTCACAGTTATGAATGAGATGTCATGCCTGCCATCAACCAAAAAGAA
Protein sequenceShow/hide protein sequence
MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFD
SLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ